EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_CAROLIEiJ_G0020067 (Gene tree)
Gene ID: 110310077
Gene Symbol: Xrcc6
Alias: G22p1|Ku p70|Ku70
Full Name: X-ray repair complementing defective repair in Chinese hamster cells 6
Gene Type: protein_coding
Species: Mus_caroli
Status: putative
Strand: Plus strand
Length: 53145 bases
Position: chr15:75993345-76046489
Accession: 95606
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CAROLIEiJ_P0039171	SAP	PF02037.27	1.2e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CAROLIEiJ_T0039175	-	686	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0039169	-	3185	-	MGP_CAROLIEiJ_P0039169	574 (aa)	-	-
MGP_CAROLIEiJ_T0039176	-	428	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0039174	-	773	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0039162	-	785	-	MGP_CAROLIEiJ_P0039162	106 (aa)	-	UPI0001F793E2
MGP_CAROLIEiJ_T0039172	-	677	-	MGP_CAROLIEiJ_P0039172	217 (aa)	-	-
MGP_CAROLIEiJ_T0039173	-	426	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0039170	-	2024	-	MGP_CAROLIEiJ_P0039170	574 (aa)	-	-
MGP_CAROLIEiJ_T0039171	-	2033	-	MGP_CAROLIEiJ_P0039171	583 (aa)	-	-

Gene Model

Click here to download MGP_CAROLIEiJ_G0020067's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CAROLIEiJ_G0020067's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_CAROLIEiJ_G0020067	Xrcc6	99	77.467	ENSG00000196419	XRCC6	99	77.467	Homo_sapiens
MGP_CAROLIEiJ_G0020067	Xrcc6	99	52.951	ENSAPOG00000012704	xrcc6	99	53.355	Acanthochromis_polyacanthus
MGP_CAROLIEiJ_G0020067	Xrcc6	99	53.279	ENSACIG00000021277	xrcc6	99	53.279	Amphilophus_citrinellus
MGP_CAROLIEiJ_G0020067	Xrcc6	99	52.459	ENSAOCG00000021344	xrcc6	99	52.864	Amphiprion_ocellaris
MGP_CAROLIEiJ_G0020067	Xrcc6	99	52.623	ENSAPEG00000020712	xrcc6	99	53.028	Amphiprion_percula
MGP_CAROLIEiJ_G0020067	Xrcc6	99	53.115	ENSATEG00000007119	xrcc6	99	53.115	Anabas_testudineus
MGP_CAROLIEiJ_G0020067	Xrcc6	91	63.899	ENSAPLG00000004469	XRCC6	100	63.899	Anas_platyrhynchos
MGP_CAROLIEiJ_G0020067	Xrcc6	99	66.776	ENSANAG00000035230	-	99	66.776	Aotus_nancymaae
MGP_CAROLIEiJ_G0020067	Xrcc6	99	67.388	ENSANAG00000023445	-	99	67.388	Aotus_nancymaae
MGP_CAROLIEiJ_G0020067	Xrcc6	99	77.303	ENSANAG00000018684	XRCC6	99	77.303	Aotus_nancymaae
MGP_CAROLIEiJ_G0020067	Xrcc6	99	69.307	ENSANAG00000020017	-	99	69.142	Aotus_nancymaae
MGP_CAROLIEiJ_G0020067	Xrcc6	99	53.607	ENSACLG00000018608	xrcc6	99	53.607	Astatotilapia_calliptera
MGP_CAROLIEiJ_G0020067	Xrcc6	99	53.770	ENSAMXG00000007545	xrcc6	99	53.770	Astyanax_mexicanus
MGP_CAROLIEiJ_G0020067	Xrcc6	99	77.632	ENSCJAG00000045512	XRCC6	99	77.632	Callithrix_jacchus
MGP_CAROLIEiJ_G0020067	Xrcc6	99	78.654	ENSTSYG00000011348	XRCC6	99	78.654	Carlito_syrichta
MGP_CAROLIEiJ_G0020067	Xrcc6	99	63.366	ENSCCAG00000037663	-	97	63.036	Cebus_capucinus
MGP_CAROLIEiJ_G0020067	Xrcc6	99	73.026	ENSCCAG00000030041	-	95	72.862	Cebus_capucinus
MGP_CAROLIEiJ_G0020067	Xrcc6	90	84.326	ENSCCAG00000030468	-	99	84.326	Cebus_capucinus
MGP_CAROLIEiJ_G0020067	Xrcc6	99	68.268	ENSCCAG00000035711	-	99	68.268	Cebus_capucinus
MGP_CAROLIEiJ_G0020067	Xrcc6	99	77.138	ENSCATG00000042366	XRCC6	99	77.138	Cercocebus_atys
MGP_CAROLIEiJ_G0020067	Xrcc6	100	79.639	ENSCLAG00000016669	XRCC6	100	79.639	Chinchilla_lanigera
MGP_CAROLIEiJ_G0020067	Xrcc6	99	77.138	ENSCSAG00000005784	XRCC6	99	77.138	Chlorocebus_sabaeus
MGP_CAROLIEiJ_G0020067	Xrcc6	99	68.801	ENSCPBG00000020535	XRCC6	99	68.801	Chrysemys_picta_bellii
MGP_CAROLIEiJ_G0020067	Xrcc6	95	30.782	ENSCING00000000633	-	96	30.782	Ciona_intestinalis
MGP_CAROLIEiJ_G0020067	Xrcc6	99	77.138	ENSCANG00000031032	XRCC6	99	77.138	Colobus_angolensis_palliatus
MGP_CAROLIEiJ_G0020067	Xrcc6	100	77.961	ENSCGRG00001019029	Xrcc6	100	77.961	Cricetulus_griseus_chok1gshd
MGP_CAROLIEiJ_G0020067	Xrcc6	100	86.184	ENSCGRG00000001528	Xrcc6	100	86.184	Cricetulus_griseus_crigri
MGP_CAROLIEiJ_G0020067	Xrcc6	99	53.279	ENSCSEG00000020434	xrcc6	99	53.279	Cynoglossus_semilaevis
MGP_CAROLIEiJ_G0020067	Xrcc6	99	52.459	ENSCVAG00000002189	xrcc6	99	52.459	Cyprinodon_variegatus
MGP_CAROLIEiJ_G0020067	Xrcc6	99	54.812	ENSDARG00000071551	xrcc6	100	54.812	Danio_rerio
MGP_CAROLIEiJ_G0020067	Xrcc6	68	81.538	ENSETEG00000015333	-	65	81.538	Echinops_telfairi
MGP_CAROLIEiJ_G0020067	Xrcc6	100	77.011	ENSEASG00005001514	XRCC6	100	77.340	Equus_asinus_asinus
MGP_CAROLIEiJ_G0020067	Xrcc6	100	76.519	ENSECAG00000017563	XRCC6	100	76.909	Equus_caballus
MGP_CAROLIEiJ_G0020067	Xrcc6	99	51.311	ENSELUG00000020301	xrcc6	99	51.311	Esox_lucius
MGP_CAROLIEiJ_G0020067	Xrcc6	99	64.590	ENSFALG00000011908	XRCC6	97	64.754	Ficedula_albicollis
MGP_CAROLIEiJ_G0020067	Xrcc6	99	54.290	ENSFHEG00000016833	xrcc6	99	54.290	Fundulus_heteroclitus
MGP_CAROLIEiJ_G0020067	Xrcc6	88	53.640	ENSGMOG00000013524	xrcc6	89	54.023	Gadus_morhua
MGP_CAROLIEiJ_G0020067	Xrcc6	99	62.193	ENSGALG00000011932	XRCC6	99	62.357	Gallus_gallus
MGP_CAROLIEiJ_G0020067	Xrcc6	99	51.967	ENSGAFG00000008130	xrcc6	99	51.967	Gambusia_affinis
MGP_CAROLIEiJ_G0020067	Xrcc6	99	51.299	ENSGACG00000004868	xrcc6	99	51.702	Gasterosteus_aculeatus
MGP_CAROLIEiJ_G0020067	Xrcc6	99	67.816	ENSGAGG00000017518	XRCC6	99	67.816	Gopherus_agassizii
MGP_CAROLIEiJ_G0020067	Xrcc6	99	77.467	ENSGGOG00000015885	XRCC6	99	77.467	Gorilla_gorilla
MGP_CAROLIEiJ_G0020067	Xrcc6	91	54.093	ENSHBUG00000023281	xrcc6	99	54.093	Haplochromis_burtoni
MGP_CAROLIEiJ_G0020067	Xrcc6	100	78.289	ENSHGLG00000018078	XRCC6	100	78.289	Heterocephalus_glaber_female
MGP_CAROLIEiJ_G0020067	Xrcc6	100	78.289	ENSHGLG00100011264	XRCC6	100	78.289	Heterocephalus_glaber_male
MGP_CAROLIEiJ_G0020067	Xrcc6	99	49.754	ENSHCOG00000009821	xrcc6	99	49.837	Hippocampus_comes
MGP_CAROLIEiJ_G0020067	Xrcc6	99	52.614	ENSIPUG00000000767	xrcc6	100	52.451	Ictalurus_punctatus
MGP_CAROLIEiJ_G0020067	Xrcc6	100	80.952	ENSSTOG00000009490	XRCC6	100	81.281	Ictidomys_tridecemlineatus
MGP_CAROLIEiJ_G0020067	Xrcc6	100	83.932	ENSJJAG00000017136	Xrcc6	100	84.103	Jaculus_jaculus
MGP_CAROLIEiJ_G0020067	Xrcc6	99	52.951	ENSKMAG00000002141	xrcc6	99	53.115	Kryptolebias_marmoratus
MGP_CAROLIEiJ_G0020067	Xrcc6	99	54.098	ENSLBEG00000002691	xrcc6	99	54.501	Labrus_bergylta
MGP_CAROLIEiJ_G0020067	Xrcc6	94	59.615	ENSLOCG00000011533	xrcc6	99	59.615	Lepisosteus_oculatus
MGP_CAROLIEiJ_G0020067	Xrcc6	99	77.138	ENSMFAG00000003352	XRCC6	99	77.138	Macaca_fascicularis
MGP_CAROLIEiJ_G0020067	Xrcc6	99	77.138	ENSMMUG00000001856	XRCC6	99	77.138	Macaca_mulatta
MGP_CAROLIEiJ_G0020067	Xrcc6	99	77.138	ENSMNEG00000035076	XRCC6	99	77.138	Macaca_nemestrina
MGP_CAROLIEiJ_G0020067	Xrcc6	99	77.138	ENSMLEG00000019869	XRCC6	99	77.138	Mandrillus_leucophaeus
MGP_CAROLIEiJ_G0020067	Xrcc6	95	51.536	ENSMAMG00000003405	xrcc6	97	51.536	Mastacembelus_armatus
MGP_CAROLIEiJ_G0020067	Xrcc6	99	51.882	ENSMAMG00000003368	xrcc6	99	52.046	Mastacembelus_armatus
MGP_CAROLIEiJ_G0020067	Xrcc6	99	53.443	ENSMZEG00005028080	xrcc6	99	53.443	Maylandia_zebra
MGP_CAROLIEiJ_G0020067	Xrcc6	99	61.866	ENSMGAG00000012146	XRCC6	99	61.827	Meleagris_gallopavo
MGP_CAROLIEiJ_G0020067	Xrcc6	99	85.997	ENSMAUG00000017340	Xrcc6	100	85.997	Mesocricetus_auratus
MGP_CAROLIEiJ_G0020067	Xrcc6	99	84.843	ENSMOCG00000015717	Xrcc6	100	84.843	Microtus_ochrogaster
MGP_CAROLIEiJ_G0020067	Xrcc6	99	52.310	ENSMMOG00000003536	xrcc6	99	52.310	Mola_mola
MGP_CAROLIEiJ_G0020067	Xrcc6	99	54.590	ENSMALG00000013912	xrcc6	95	54.590	Monopterus_albus
MGP_CAROLIEiJ_G0020067	Xrcc6	100	93.257	ENSMUSG00000022471	Xrcc6	100	93.257	Mus_musculus
MGP_CAROLIEiJ_G0020067	Xrcc6	100	90.954	MGP_PahariEiJ_G0020069	Xrcc6	100	90.954	Mus_pahari
MGP_CAROLIEiJ_G0020067	Xrcc6	96	92.110	MGP_SPRETEiJ_G0020967	Xrcc6	100	92.110	Mus_spretus
MGP_CAROLIEiJ_G0020067	Xrcc6	100	82.730	ENSNGAG00000013750	Xrcc6	100	82.730	Nannospalax_galili
MGP_CAROLIEiJ_G0020067	Xrcc6	99	53.934	ENSNBRG00000004125	xrcc6	99	53.934	Neolamprologus_brichardi
MGP_CAROLIEiJ_G0020067	Xrcc6	95	78.066	ENSOPRG00000002386	XRCC6	99	78.066	Ochotona_princeps
MGP_CAROLIEiJ_G0020067	Xrcc6	100	77.176	ENSODEG00000015847	XRCC6	100	77.176	Octodon_degus
MGP_CAROLIEiJ_G0020067	Xrcc6	99	53.607	ENSONIG00000019715	xrcc6	99	53.607	Oreochromis_niloticus
MGP_CAROLIEiJ_G0020067	Xrcc6	67	70.531	ENSOANG00000011328	XRCC6	100	70.531	Ornithorhynchus_anatinus
MGP_CAROLIEiJ_G0020067	Xrcc6	99	80.231	ENSOCUG00000006948	XRCC6	99	80.890	Oryctolagus_cuniculus
MGP_CAROLIEiJ_G0020067	Xrcc6	99	53.519	ENSORLG00020007820	xrcc6	99	53.519	Oryzias_latipes_hni
MGP_CAROLIEiJ_G0020067	Xrcc6	99	53.682	ENSORLG00015006406	xrcc6	99	53.682	Oryzias_latipes_hsok
MGP_CAROLIEiJ_G0020067	Xrcc6	99	53.682	ENSOMEG00000008998	xrcc6	99	54.085	Oryzias_melastigma
MGP_CAROLIEiJ_G0020067	Xrcc6	99	78.618	ENSOGAG00000008821	XRCC6	100	78.783	Otolemur_garnettii
MGP_CAROLIEiJ_G0020067	Xrcc6	99	65.461	ENSPPAG00000037167	XRCC6	99	85.714	Pan_paniscus
MGP_CAROLIEiJ_G0020067	Xrcc6	99	77.467	ENSPTRG00000022548	XRCC6	99	78.313	Pan_troglodytes
MGP_CAROLIEiJ_G0020067	Xrcc6	99	77.467	ENSPTRG00000045824	XRCC6	99	78.313	Pan_troglodytes
MGP_CAROLIEiJ_G0020067	Xrcc6	99	76.974	ENSPANG00000001252	XRCC6	99	77.797	Papio_anubis
MGP_CAROLIEiJ_G0020067	Xrcc6	99	55.719	ENSPKIG00000003974	xrcc6	100	55.719	Paramormyrops_kingsleyae
MGP_CAROLIEiJ_G0020067	Xrcc6	98	52.413	ENSPMGG00000014220	xrcc6	100	52.824	Periophthalmus_magnuspinnatus
MGP_CAROLIEiJ_G0020067	Xrcc6	100	84.868	ENSPEMG00000023446	Xrcc6	100	84.868	Peromyscus_maniculatus_bairdii
MGP_CAROLIEiJ_G0020067	Xrcc6	99	72.742	ENSPCIG00000026409	XRCC6	99	72.906	Phascolarctos_cinereus
MGP_CAROLIEiJ_G0020067	Xrcc6	99	53.465	ENSPFOG00000017173	xrcc6	99	53.279	Poecilia_formosa
MGP_CAROLIEiJ_G0020067	Xrcc6	99	52.951	ENSPLAG00000000562	xrcc6	99	52.951	Poecilia_latipinna
MGP_CAROLIEiJ_G0020067	Xrcc6	99	53.630	ENSPMEG00000018478	xrcc6	99	53.443	Poecilia_mexicana
MGP_CAROLIEiJ_G0020067	Xrcc6	99	53.268	ENSPREG00000020957	xrcc6	93	53.268	Poecilia_reticulata
MGP_CAROLIEiJ_G0020067	Xrcc6	99	67.928	ENSPPYG00000011876	XRCC6	99	67.928	Pongo_abelii
MGP_CAROLIEiJ_G0020067	Xrcc6	100	77.467	ENSPVAG00000001168	XRCC6	100	77.467	Pteropus_vampyrus
MGP_CAROLIEiJ_G0020067	Xrcc6	99	53.607	ENSPNYG00000003815	xrcc6	99	51.014	Pundamilia_nyererei
MGP_CAROLIEiJ_G0020067	Xrcc6	100	87.829	ENSRNOG00000006392	Xrcc6	100	87.829	Rattus_norvegicus
MGP_CAROLIEiJ_G0020067	Xrcc6	99	70.559	ENSRBIG00000039794	XRCC6	99	70.559	Rhinopithecus_bieti
MGP_CAROLIEiJ_G0020067	Xrcc6	99	77.138	ENSRROG00000030297	XRCC6	99	77.138	Rhinopithecus_roxellana
MGP_CAROLIEiJ_G0020067	Xrcc6	65	61.576	ENSSBOG00000024724	-	99	61.576	Saimiri_boliviensis_boliviensis
MGP_CAROLIEiJ_G0020067	Xrcc6	99	72.414	ENSSHAG00000010790	XRCC6	99	72.414	Sarcophilus_harrisii
MGP_CAROLIEiJ_G0020067	Xrcc6	99	55.882	ENSSFOG00015014409	xrcc6	100	55.719	Scleropages_formosus
MGP_CAROLIEiJ_G0020067	Xrcc6	99	53.770	ENSSMAG00000006496	xrcc6	99	53.770	Scophthalmus_maximus
MGP_CAROLIEiJ_G0020067	Xrcc6	99	53.443	ENSSDUG00000007542	xrcc6	99	53.443	Seriola_dumerili
MGP_CAROLIEiJ_G0020067	Xrcc6	99	53.279	ENSSLDG00000009974	xrcc6	99	53.279	Seriola_lalandi_dorsalis
MGP_CAROLIEiJ_G0020067	Xrcc6	99	68.966	ENSSPUG00000012086	XRCC6	99	68.966	Sphenodon_punctatus
MGP_CAROLIEiJ_G0020067	Xrcc6	99	53.115	ENSSPAG00000015199	xrcc6	99	53.115	Stegastes_partitus
MGP_CAROLIEiJ_G0020067	Xrcc6	96	66.151	ENSTGUG00000009852	-	95	66.151	Taeniopygia_guttata
MGP_CAROLIEiJ_G0020067	Xrcc6	99	51.067	ENSTRUG00000017070	xrcc6	99	51.067	Takifugu_rubripes
MGP_CAROLIEiJ_G0020067	Xrcc6	95	53.469	ENSTNIG00000012947	xrcc6	99	53.469	Tetraodon_nigroviridis
MGP_CAROLIEiJ_G0020067	Xrcc6	95	76.552	ENSTBEG00000011736	XRCC6	99	76.420	Tupaia_belangeri
MGP_CAROLIEiJ_G0020067	Xrcc6	81	84.615	ENSTTRG00000006749	XRCC6	78	84.615	Tursiops_truncatus
MGP_CAROLIEiJ_G0020067	Xrcc6	99	53.279	ENSXMAG00000009691	xrcc6	99	53.279	Xiphophorus_maculatus