EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_CAROLIEiJ_G0020092 (Gene tree)
Gene ID: 110310342
Gene Symbol: Rrp7a
Alias: 1110014J01Rik
Full Name: ribosomal RNA processing 7 homolog A
Gene Type: protein_coding
Species: Mus_caroli
Status: putative
Strand: Minus strand
Length: 9676 bases
Position: chr15:77113169-77122844
Accession: 110310342
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CAROLIEiJ_P0039231	RRP7	PF12923.7	8.2e-35	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CAROLIEiJ_T0039235	-	760	-	MGP_CAROLIEiJ_P0039235	163 (aa)	-	-
MGP_CAROLIEiJ_T0039234	-	492	-	MGP_CAROLIEiJ_P0039234	145 (aa)	-	-
MGP_CAROLIEiJ_T0039231	-	4341	-	MGP_CAROLIEiJ_P0039231	280 (aa)	XP_021038871	UPI000A31587C
MGP_CAROLIEiJ_T0039233	-	769	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0039232	-	472	-	MGP_CAROLIEiJ_P0039232	49 (aa)	-	-

Gene Model

Click here to download MGP_CAROLIEiJ_G0020092's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CAROLIEiJ_G0020092's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_CAROLIEiJ_G0020092	Rrp7a	100	83.929	ENSG00000189306	RRP7A	100	83.929	Homo_sapiens
MGP_CAROLIEiJ_G0020092	Rrp7a	100	44.561	ENSAPOG00000021250	rrp7a	100	44.561	Acanthochromis_polyacanthus
MGP_CAROLIEiJ_G0020092	Rrp7a	100	83.214	ENSAMEG00000009503	RRP7A	100	83.214	Ailuropoda_melanoleuca
MGP_CAROLIEiJ_G0020092	Rrp7a	100	46.528	ENSACIG00000023067	rrp7a	100	45.993	Amphilophus_citrinellus
MGP_CAROLIEiJ_G0020092	Rrp7a	96	46.545	ENSAOCG00000004115	rrp7a	94	46.992	Amphiprion_ocellaris
MGP_CAROLIEiJ_G0020092	Rrp7a	96	46.545	ENSAPEG00000013688	rrp7a	98	47.328	Amphiprion_percula
MGP_CAROLIEiJ_G0020092	Rrp7a	100	44.406	ENSATEG00000009664	rrp7a	100	45.105	Anabas_testudineus
MGP_CAROLIEiJ_G0020092	Rrp7a	94	63.636	ENSACAG00000003579	RRP7A	94	63.636	Anolis_carolinensis
MGP_CAROLIEiJ_G0020092	Rrp7a	100	84.286	ENSANAG00000031200	RRP7A	100	84.286	Aotus_nancymaae
MGP_CAROLIEiJ_G0020092	Rrp7a	100	47.552	ENSACLG00000016790	rrp7a	100	48.601	Astatotilapia_calliptera
MGP_CAROLIEiJ_G0020092	Rrp7a	98	45.230	ENSAMXG00000007921	rrp7a	94	45.230	Astyanax_mexicanus
MGP_CAROLIEiJ_G0020092	Rrp7a	95	81.648	ENSBTAG00000016510	RRP7A	100	79.643	Bos_taurus
MGP_CAROLIEiJ_G0020092	Rrp7a	100	81.071	ENSCJAG00000009668	RRP7A	100	81.071	Callithrix_jacchus
MGP_CAROLIEiJ_G0020092	Rrp7a	95	84.270	ENSCAFG00000000965	RRP7	100	82.143	Canis_familiaris
MGP_CAROLIEiJ_G0020092	Rrp7a	95	84.270	ENSCAFG00020000251	RRP7A	100	82.143	Canis_lupus_dingo
MGP_CAROLIEiJ_G0020092	Rrp7a	95	82.022	ENSCHIG00000026787	RRP7A	100	80.357	Capra_hircus
MGP_CAROLIEiJ_G0020092	Rrp7a	100	83.929	ENSTSYG00000000198	RRP7A	100	83.929	Carlito_syrichta
MGP_CAROLIEiJ_G0020092	Rrp7a	93	83.142	ENSCAPG00000002325	RRP7A	100	83.142	Cavia_aperea
MGP_CAROLIEiJ_G0020092	Rrp7a	100	82.500	ENSCPOG00000030547	RRP7A	100	82.500	Cavia_porcellus
MGP_CAROLIEiJ_G0020092	Rrp7a	100	68.929	ENSCCAG00000021486	RRP7A	100	68.929	Cebus_capucinus
MGP_CAROLIEiJ_G0020092	Rrp7a	100	81.429	ENSCLAG00000016715	RRP7A	100	81.429	Chinchilla_lanigera
MGP_CAROLIEiJ_G0020092	Rrp7a	100	83.571	ENSCSAG00000005657	RRP7A	100	83.571	Chlorocebus_sabaeus
MGP_CAROLIEiJ_G0020092	Rrp7a	94	70.455	ENSCPBG00000021814	RRP7A	95	70.455	Chrysemys_picta_bellii
MGP_CAROLIEiJ_G0020092	Rrp7a	79	42.035	ENSCSAVG00000002555	-	85	42.222	Ciona_savignyi
MGP_CAROLIEiJ_G0020092	Rrp7a	81	86.784	ENSCGRG00001005713	-	100	86.784	Cricetulus_griseus_chok1gshd
MGP_CAROLIEiJ_G0020092	Rrp7a	66	84.848	ENSCGRG00001021873	-	100	84.848	Cricetulus_griseus_chok1gshd
MGP_CAROLIEiJ_G0020092	Rrp7a	100	86.071	ENSCGRG00000009567	-	100	86.071	Cricetulus_griseus_crigri
MGP_CAROLIEiJ_G0020092	Rrp7a	91	78.431	ENSCGRG00000000540	-	100	78.431	Cricetulus_griseus_crigri
MGP_CAROLIEiJ_G0020092	Rrp7a	99	80.714	ENSCGRG00000000552	-	99	80.714	Cricetulus_griseus_crigri
MGP_CAROLIEiJ_G0020092	Rrp7a	100	46.667	ENSCSEG00000007185	rrp7a	100	46.667	Cynoglossus_semilaevis
MGP_CAROLIEiJ_G0020092	Rrp7a	100	45.675	ENSCVAG00000004349	rrp7a	100	46.503	Cyprinodon_variegatus
MGP_CAROLIEiJ_G0020092	Rrp7a	96	43.478	ENSDARG00000098934	rrp7a	99	43.321	Danio_rerio
MGP_CAROLIEiJ_G0020092	Rrp7a	100	85.357	ENSDNOG00000037442	RRP7A	92	85.357	Dasypus_novemcinctus
MGP_CAROLIEiJ_G0020092	Rrp7a	100	82.500	ENSDORG00000016138	Rrp7a	100	82.500	Dipodomys_ordii
MGP_CAROLIEiJ_G0020092	Rrp7a	93	37.453	FBgn0031764	CG9107	98	37.453	Drosophila_melanogaster
MGP_CAROLIEiJ_G0020092	Rrp7a	91	82.353	ENSETEG00000018025	RRP7A	100	82.353	Echinops_telfairi
MGP_CAROLIEiJ_G0020092	Rrp7a	93	43.396	ENSEBUG00000010231	rrp7a	91	43.019	Eptatretus_burgeri
MGP_CAROLIEiJ_G0020092	Rrp7a	100	85.000	ENSEASG00005000804	RRP7A	100	85.000	Equus_asinus_asinus
MGP_CAROLIEiJ_G0020092	Rrp7a	100	84.643	ENSECAG00000015168	RRP7	100	84.643	Equus_caballus
MGP_CAROLIEiJ_G0020092	Rrp7a	93	45.455	ENSELUG00000009036	rrp7a	94	46.970	Esox_lucius
MGP_CAROLIEiJ_G0020092	Rrp7a	100	81.071	ENSFCAG00000033258	RRP7A	79	81.071	Felis_catus
MGP_CAROLIEiJ_G0020092	Rrp7a	91	66.926	ENSFALG00000011635	RRP7A	87	66.795	Ficedula_albicollis
MGP_CAROLIEiJ_G0020092	Rrp7a	99	82.079	ENSFDAG00000001321	RRP7A	100	82.079	Fukomys_damarensis
MGP_CAROLIEiJ_G0020092	Rrp7a	100	47.405	ENSFHEG00000006098	rrp7a	97	47.405	Fundulus_heteroclitus
MGP_CAROLIEiJ_G0020092	Rrp7a	93	48.302	ENSGMOG00000006218	rrp7a	99	48.679	Gadus_morhua
MGP_CAROLIEiJ_G0020092	Rrp7a	95	66.667	ENSGALG00000011866	RRP7A	97	66.667	Gallus_gallus
MGP_CAROLIEiJ_G0020092	Rrp7a	100	45.675	ENSGAFG00000017459	rrp7a	100	45.139	Gambusia_affinis
MGP_CAROLIEiJ_G0020092	Rrp7a	93	48.315	ENSGACG00000007212	rrp7a	99	47.566	Gasterosteus_aculeatus
MGP_CAROLIEiJ_G0020092	Rrp7a	97	68.705	ENSGAGG00000014621	RRP7A	99	68.705	Gopherus_agassizii
MGP_CAROLIEiJ_G0020092	Rrp7a	95	83.521	ENSGGOG00000014957	RRP7A	100	81.786	Gorilla_gorilla
MGP_CAROLIEiJ_G0020092	Rrp7a	100	47.552	ENSHBUG00000021788	rrp7a	100	48.601	Haplochromis_burtoni
MGP_CAROLIEiJ_G0020092	Rrp7a	100	80.565	ENSHGLG00000015706	RRP7A	100	80.565	Heterocephalus_glaber_female
MGP_CAROLIEiJ_G0020092	Rrp7a	99	79.928	ENSHGLG00100008187	-	99	79.928	Heterocephalus_glaber_male
MGP_CAROLIEiJ_G0020092	Rrp7a	100	76.868	ENSHGLG00100009556	-	100	76.868	Heterocephalus_glaber_male
MGP_CAROLIEiJ_G0020092	Rrp7a	93	46.816	ENSHCOG00000005813	rrp7a	82	47.566	Hippocampus_comes
MGP_CAROLIEiJ_G0020092	Rrp7a	93	50.000	ENSIPUG00000000556	rrp7a	95	50.000	Ictalurus_punctatus
MGP_CAROLIEiJ_G0020092	Rrp7a	100	84.643	ENSSTOG00000003111	RRP7A	100	84.643	Ictidomys_tridecemlineatus
MGP_CAROLIEiJ_G0020092	Rrp7a	100	81.786	ENSJJAG00000019486	Rrp7a	100	81.786	Jaculus_jaculus
MGP_CAROLIEiJ_G0020092	Rrp7a	93	47.940	ENSKMAG00000013819	rrp7a	94	47.940	Kryptolebias_marmoratus
MGP_CAROLIEiJ_G0020092	Rrp7a	95	58.582	ENSLACG00000002670	RRP7A	98	58.801	Latimeria_chalumnae
MGP_CAROLIEiJ_G0020092	Rrp7a	100	82.143	ENSLAFG00000012447	RRP7A	100	82.143	Loxodonta_africana
MGP_CAROLIEiJ_G0020092	Rrp7a	95	86.517	ENSMFAG00000042855	RRP7A	100	84.643	Macaca_fascicularis
MGP_CAROLIEiJ_G0020092	Rrp7a	100	77.500	ENSMFAG00000041664	-	100	77.500	Macaca_fascicularis
MGP_CAROLIEiJ_G0020092	Rrp7a	100	78.929	ENSMMUG00000010193	-	100	78.929	Macaca_mulatta
MGP_CAROLIEiJ_G0020092	Rrp7a	100	71.071	ENSMMUG00000009716	RRP7A	100	71.071	Macaca_mulatta
MGP_CAROLIEiJ_G0020092	Rrp7a	95	86.142	ENSMNEG00000033705	RRP7A	100	84.286	Macaca_nemestrina
MGP_CAROLIEiJ_G0020092	Rrp7a	99	74.552	ENSMLEG00000040230	RRP7A	99	75.000	Mandrillus_leucophaeus
MGP_CAROLIEiJ_G0020092	Rrp7a	93	49.064	ENSMAMG00000009125	rrp7a	94	49.813	Mastacembelus_armatus
MGP_CAROLIEiJ_G0020092	Rrp7a	100	47.552	ENSMZEG00005005197	rrp7a	100	48.601	Maylandia_zebra
MGP_CAROLIEiJ_G0020092	Rrp7a	91	68.217	ENSMGAG00000011980	RRP7A	100	68.217	Meleagris_gallopavo
MGP_CAROLIEiJ_G0020092	Rrp7a	100	86.071	ENSMICG00000041800	RRP7A	100	86.071	Microcebus_murinus
MGP_CAROLIEiJ_G0020092	Rrp7a	100	45.614	ENSMMOG00000004976	rrp7a	100	45.965	Mola_mola
MGP_CAROLIEiJ_G0020092	Rrp7a	94	70.787	ENSMODG00000006914	RRP7A	94	70.787	Monodelphis_domestica
MGP_CAROLIEiJ_G0020092	Rrp7a	96	46.377	ENSMALG00000001933	rrp7a	98	47.101	Monopterus_albus
MGP_CAROLIEiJ_G0020092	Rrp7a	100	97.857	ENSMUSG00000018040	Rrp7a	98	100.000	Mus_musculus
MGP_CAROLIEiJ_G0020092	Rrp7a	100	97.500	MGP_PahariEiJ_G0020099	Rrp7a	100	97.500	Mus_pahari
MGP_CAROLIEiJ_G0020092	Rrp7a	100	97.857	MGP_SPRETEiJ_G0020990	Rrp7a	100	97.857	Mus_spretus
MGP_CAROLIEiJ_G0020092	Rrp7a	100	81.429	ENSMPUG00000016315	RRP7A	100	81.429	Mustela_putorius_furo
MGP_CAROLIEiJ_G0020092	Rrp7a	100	84.286	ENSMLUG00000012404	RRP7A	100	84.286	Myotis_lucifugus
MGP_CAROLIEiJ_G0020092	Rrp7a	100	83.929	ENSNGAG00000010039	Rrp7a	100	83.929	Nannospalax_galili
MGP_CAROLIEiJ_G0020092	Rrp7a	93	48.315	ENSNBRG00000001824	rrp7a	95	49.438	Neolamprologus_brichardi
MGP_CAROLIEiJ_G0020092	Rrp7a	95	85.768	ENSNLEG00000036258	RRP7A	100	83.929	Nomascus_leucogenys
MGP_CAROLIEiJ_G0020092	Rrp7a	100	78.929	ENSODEG00000015126	RRP7A	100	78.929	Octodon_degus
MGP_CAROLIEiJ_G0020092	Rrp7a	100	46.154	ENSONIG00000008364	rrp7a	99	47.203	Oreochromis_niloticus
MGP_CAROLIEiJ_G0020092	Rrp7a	82	64.655	ENSOANG00000015007	RRP7A	85	64.655	Ornithorhynchus_anatinus
MGP_CAROLIEiJ_G0020092	Rrp7a	99	76.344	ENSOCUG00000027434	RRP7A	100	76.344	Oryctolagus_cuniculus
MGP_CAROLIEiJ_G0020092	Rrp7a	100	46.154	ENSORLG00000014826	rrp7a	94	47.191	Oryzias_latipes
MGP_CAROLIEiJ_G0020092	Rrp7a	100	46.154	ENSORLG00020006078	rrp7a	94	47.191	Oryzias_latipes_hni
MGP_CAROLIEiJ_G0020092	Rrp7a	100	45.455	ENSORLG00015018190	rrp7a	94	46.816	Oryzias_latipes_hsok
MGP_CAROLIEiJ_G0020092	Rrp7a	98	46.071	ENSOMEG00000007090	rrp7a	95	46.816	Oryzias_melastigma
MGP_CAROLIEiJ_G0020092	Rrp7a	100	82.143	ENSOGAG00000002857	RRP7A	100	82.143	Otolemur_garnettii
MGP_CAROLIEiJ_G0020092	Rrp7a	95	81.648	ENSOARG00000018986	RRP7A	100	80.000	Ovis_aries
MGP_CAROLIEiJ_G0020092	Rrp7a	75	77.033	ENSPPAG00000029825	-	85	77.033	Pan_paniscus
MGP_CAROLIEiJ_G0020092	Rrp7a	83	82.403	ENSPPAG00000021416	-	82	82.051	Pan_paniscus
MGP_CAROLIEiJ_G0020092	Rrp7a	100	81.071	ENSPPRG00000022185	RRP7A	100	81.071	Panthera_pardus
MGP_CAROLIEiJ_G0020092	Rrp7a	95	57.246	ENSPTIG00000020965	RRP7A	100	55.208	Panthera_tigris_altaica
MGP_CAROLIEiJ_G0020092	Rrp7a	50	79.286	ENSPTRG00000033935	-	100	76.471	Pan_troglodytes
MGP_CAROLIEiJ_G0020092	Rrp7a	100	78.214	ENSPANG00000032001	-	100	77.857	Papio_anubis
MGP_CAROLIEiJ_G0020092	Rrp7a	95	86.142	ENSPANG00000025354	-	100	84.286	Papio_anubis
MGP_CAROLIEiJ_G0020092	Rrp7a	93	48.881	ENSPKIG00000007209	rrp7a	81	49.254	Paramormyrops_kingsleyae
MGP_CAROLIEiJ_G0020092	Rrp7a	91	69.767	ENSPSIG00000007988	RRP7A	97	69.767	Pelodiscus_sinensis
MGP_CAROLIEiJ_G0020092	Rrp7a	91	40.698	ENSPMGG00000009485	rrp7a	91	39.922	Periophthalmus_magnuspinnatus
MGP_CAROLIEiJ_G0020092	Rrp7a	100	89.643	ENSPEMG00000022265	Rrp7a	100	89.643	Peromyscus_maniculatus_bairdii
MGP_CAROLIEiJ_G0020092	Rrp7a	100	48.582	ENSPMAG00000002823	rrp7a	100	48.582	Petromyzon_marinus
MGP_CAROLIEiJ_G0020092	Rrp7a	95	72.556	ENSPCIG00000026195	RRP7A	95	72.556	Phascolarctos_cinereus
MGP_CAROLIEiJ_G0020092	Rrp7a	100	44.637	ENSPFOG00000001042	rrp7a	100	44.755	Poecilia_formosa
MGP_CAROLIEiJ_G0020092	Rrp7a	59	52.571	ENSPLAG00000010787	-	72	52.907	Poecilia_latipinna
MGP_CAROLIEiJ_G0020092	Rrp7a	59	52.571	ENSPLAG00000009537	rrp7a	72	52.907	Poecilia_latipinna
MGP_CAROLIEiJ_G0020092	Rrp7a	100	44.983	ENSPMEG00000018204	rrp7a	100	45.105	Poecilia_mexicana
MGP_CAROLIEiJ_G0020092	Rrp7a	100	45.833	ENSPREG00000016492	rrp7a	100	45.965	Poecilia_reticulata
MGP_CAROLIEiJ_G0020092	Rrp7a	95	84.644	ENSPPYG00000011897	RRP7A	100	82.857	Pongo_abelii
MGP_CAROLIEiJ_G0020092	Rrp7a	95	86.142	ENSPCOG00000014018	RRP7A	100	84.286	Propithecus_coquereli
MGP_CAROLIEiJ_G0020092	Rrp7a	90	82.937	ENSPVAG00000003330	RRP7A	100	82.937	Pteropus_vampyrus
MGP_CAROLIEiJ_G0020092	Rrp7a	100	47.203	ENSPNYG00000020343	rrp7a	100	48.252	Pundamilia_nyererei
MGP_CAROLIEiJ_G0020092	Rrp7a	100	44.755	ENSPNAG00000014376	rrp7a	100	44.755	Pygocentrus_nattereri
MGP_CAROLIEiJ_G0020092	Rrp7a	100	94.286	ENSRNOG00000022896	Rrp7a	100	94.286	Rattus_norvegicus
MGP_CAROLIEiJ_G0020092	Rrp7a	100	73.759	ENSRBIG00000040358	RRP7A	100	71.986	Rhinopithecus_bieti
MGP_CAROLIEiJ_G0020092	Rrp7a	100	82.206	ENSRROG00000036754	RRP7A	100	82.206	Rhinopithecus_roxellana
MGP_CAROLIEiJ_G0020092	Rrp7a	100	81.786	ENSSBOG00000009234	RRP7A	100	81.786	Saimiri_boliviensis_boliviensis
MGP_CAROLIEiJ_G0020092	Rrp7a	75	75.598	ENSSHAG00000005715	RRP7A	100	75.598	Sarcophilus_harrisii
MGP_CAROLIEiJ_G0020092	Rrp7a	100	50.704	ENSSFOG00015012621	rrp7a	86	51.661	Scleropages_formosus
MGP_CAROLIEiJ_G0020092	Rrp7a	100	47.018	ENSSMAG00000004593	rrp7a	100	47.018	Scophthalmus_maximus
MGP_CAROLIEiJ_G0020092	Rrp7a	96	48.000	ENSSDUG00000016921	rrp7a	98	48.000	Seriola_dumerili
MGP_CAROLIEiJ_G0020092	Rrp7a	96	47.636	ENSSLDG00000024758	rrp7a	98	47.636	Seriola_lalandi_dorsalis
MGP_CAROLIEiJ_G0020092	Rrp7a	61	95.238	ENSSARG00000002133	-	67	95.238	Sorex_araneus
MGP_CAROLIEiJ_G0020092	Rrp7a	86	63.374	ENSSPUG00000005373	RRP7A	97	63.374	Sphenodon_punctatus
MGP_CAROLIEiJ_G0020092	Rrp7a	93	47.191	ENSSPAG00000016048	rrp7a	94	46.816	Stegastes_partitus
MGP_CAROLIEiJ_G0020092	Rrp7a	95	82.772	ENSSSCG00000033983	RRP7A	100	81.071	Sus_scrofa
MGP_CAROLIEiJ_G0020092	Rrp7a	91	66.148	ENSTGUG00000009647	RRP7A	100	66.148	Taeniopygia_guttata
MGP_CAROLIEiJ_G0020092	Rrp7a	100	45.070	ENSTRUG00000024726	rrp7a	100	45.070	Takifugu_rubripes
MGP_CAROLIEiJ_G0020092	Rrp7a	100	46.479	ENSTNIG00000010842	rrp7a	99	46.479	Tetraodon_nigroviridis
MGP_CAROLIEiJ_G0020092	Rrp7a	100	83.571	ENSUAMG00000026180	RRP7A	100	83.571	Ursus_americanus
MGP_CAROLIEiJ_G0020092	Rrp7a	100	81.429	ENSUMAG00000020394	RRP7A	100	81.429	Ursus_maritimus
MGP_CAROLIEiJ_G0020092	Rrp7a	93	83.142	ENSVVUG00000002248	-	84	68.976	Vulpes_vulpes
MGP_CAROLIEiJ_G0020092	Rrp7a	95	60.674	ENSXETG00000013414	rrp7a	97	60.674	Xenopus_tropicalis
MGP_CAROLIEiJ_G0020092	Rrp7a	100	45.890	ENSXCOG00000015955	rrp7a	100	46.021	Xiphophorus_couchianus
MGP_CAROLIEiJ_G0020092	Rrp7a	100	45.704	ENSXMAG00000006165	rrp7a	100	45.833	Xiphophorus_maculatus