EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_CAROLIEiJ_G0020093 (Gene tree)
Gene ID: 110310446
Gene Symbol: Poldip3
Alias: 1110008P04Rik|PDIP46
Full Name: DNA polymerase delta interacting protein 3
Gene Type: protein_coding
Species: Mus_caroli
Status: putative
Strand: Minus strand
Length: 24450 bases
Position: chr15:77125603-77150052
Accession: 110310446
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CAROLIEiJ_P0039236	RRM_1	PF00076.22	5.2e-10	1	1
MGP_CAROLIEiJ_P0039237	RRM_1	PF00076.22	5.7e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CAROLIEiJ_T0039240	-	2439	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0039241	-	841	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0039237	-	3316	-	MGP_CAROLIEiJ_P0039237	420 (aa)	XP_021039082	UPI000A31B2E0
MGP_CAROLIEiJ_T0039236	-	3176	-	MGP_CAROLIEiJ_P0039236	391 (aa)	XP_021039081	UPI000A317B36
MGP_CAROLIEiJ_T0039239	-	666	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0039238	-	655	-	MGP_CAROLIEiJ_P0039238	202 (aa)	-	-

Gene Model

Click here to download MGP_CAROLIEiJ_G0020093's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CAROLIEiJ_G0020093's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_CAROLIEiJ_G0020093	Poldip3	100	90.736	ENSG00000100227	POLDIP3	100	90.736	Homo_sapiens
MGP_CAROLIEiJ_G0020093	Poldip3	87	41.845	ENSAPOG00000021223	poldip3	97	42.826	Acanthochromis_polyacanthus
MGP_CAROLIEiJ_G0020093	Poldip3	100	90.024	ENSAMEG00000009522	POLDIP3	98	90.024	Ailuropoda_melanoleuca
MGP_CAROLIEiJ_G0020093	Poldip3	100	48.235	ENSACIG00000023100	poldip3	100	47.552	Amphilophus_citrinellus
MGP_CAROLIEiJ_G0020093	Poldip3	100	41.856	ENSAOCG00000004142	poldip3	91	54.039	Amphiprion_ocellaris
MGP_CAROLIEiJ_G0020093	Poldip3	100	41.856	ENSAPEG00000013658	poldip3	91	54.318	Amphiprion_percula
MGP_CAROLIEiJ_G0020093	Poldip3	87	58.209	ENSATEG00000009633	poldip3	97	58.209	Anabas_testudineus
MGP_CAROLIEiJ_G0020093	Poldip3	95	74.627	ENSAPLG00000005154	POLDIP3	100	74.627	Anas_platyrhynchos
MGP_CAROLIEiJ_G0020093	Poldip3	100	72.235	ENSACAG00000003515	POLDIP3	98	72.235	Anolis_carolinensis
MGP_CAROLIEiJ_G0020093	Poldip3	100	90.736	ENSANAG00000033566	-	100	90.736	Aotus_nancymaae
MGP_CAROLIEiJ_G0020093	Poldip3	72	78.548	ENSANAG00000024431	-	96	77.558	Aotus_nancymaae
MGP_CAROLIEiJ_G0020093	Poldip3	100	44.841	ENSACLG00000016753	poldip3	86	44.576	Astatotilapia_calliptera
MGP_CAROLIEiJ_G0020093	Poldip3	87	45.877	ENSAMXG00000007939	poldip3	99	45.671	Astyanax_mexicanus
MGP_CAROLIEiJ_G0020093	Poldip3	100	91.449	ENSBTAG00000016511	POLDIP3	100	91.449	Bos_taurus
MGP_CAROLIEiJ_G0020093	Poldip3	100	90.561	ENSCJAG00000009628	POLDIP3	100	90.561	Callithrix_jacchus
MGP_CAROLIEiJ_G0020093	Poldip3	100	91.211	ENSCAFG00000000959	POLDIP3	100	91.211	Canis_familiaris
MGP_CAROLIEiJ_G0020093	Poldip3	100	86.294	ENSCAFG00020000227	POLDIP3	100	86.294	Canis_lupus_dingo
MGP_CAROLIEiJ_G0020093	Poldip3	100	91.686	ENSCHIG00000020171	POLDIP3	100	91.686	Capra_hircus
MGP_CAROLIEiJ_G0020093	Poldip3	100	92.162	ENSTSYG00000007189	POLDIP3	100	92.162	Carlito_syrichta
MGP_CAROLIEiJ_G0020093	Poldip3	95	84.987	ENSCAPG00000006798	POLDIP3	100	84.987	Cavia_aperea
MGP_CAROLIEiJ_G0020093	Poldip3	100	86.493	ENSCPOG00000019524	POLDIP3	100	86.256	Cavia_porcellus
MGP_CAROLIEiJ_G0020093	Poldip3	100	76.359	ENSCCAG00000011395	-	100	75.650	Cebus_capucinus
MGP_CAROLIEiJ_G0020093	Poldip3	100	90.499	ENSCCAG00000027969	-	100	90.499	Cebus_capucinus
MGP_CAROLIEiJ_G0020093	Poldip3	100	90.736	ENSCATG00000029583	POLDIP3	100	90.736	Cercocebus_atys
MGP_CAROLIEiJ_G0020093	Poldip3	100	88.599	ENSCLAG00000016864	POLDIP3	100	88.599	Chinchilla_lanigera
MGP_CAROLIEiJ_G0020093	Poldip3	100	90.974	ENSCSAG00000005654	POLDIP3	100	90.974	Chlorocebus_sabaeus
MGP_CAROLIEiJ_G0020093	Poldip3	100	75.592	ENSCPBG00000021819	POLDIP3	87	75.592	Chrysemys_picta_bellii
MGP_CAROLIEiJ_G0020093	Poldip3	100	90.736	ENSCANG00000027664	POLDIP3	100	90.974	Colobus_angolensis_palliatus
MGP_CAROLIEiJ_G0020093	Poldip3	100	94.133	ENSCGRG00001004211	-	100	94.133	Cricetulus_griseus_chok1gshd
MGP_CAROLIEiJ_G0020093	Poldip3	95	94.355	ENSCGRG00000009374	-	100	94.355	Cricetulus_griseus_crigri
MGP_CAROLIEiJ_G0020093	Poldip3	96	44.035	ENSCSEG00000007165	poldip3	100	43.064	Cynoglossus_semilaevis
MGP_CAROLIEiJ_G0020093	Poldip3	83	50.309	ENSCVAG00000004370	poldip3	98	43.284	Cyprinodon_variegatus
MGP_CAROLIEiJ_G0020093	Poldip3	96	40.945	ENSDARG00000099375	poldip3	98	42.085	Danio_rerio
MGP_CAROLIEiJ_G0020093	Poldip3	100	91.358	ENSDNOG00000037211	-	100	90.736	Dasypus_novemcinctus
MGP_CAROLIEiJ_G0020093	Poldip3	100	88.389	ENSDORG00000006590	Poldip3	100	88.863	Dipodomys_ordii
MGP_CAROLIEiJ_G0020093	Poldip3	100	78.095	ENSETEG00000018022	POLDIP3	100	78.095	Echinops_telfairi
MGP_CAROLIEiJ_G0020093	Poldip3	100	39.379	ENSEBUG00000001181	poldip3	93	38.902	Eptatretus_burgeri
MGP_CAROLIEiJ_G0020093	Poldip3	100	91.449	ENSEASG00005000795	POLDIP3	100	91.449	Equus_asinus_asinus
MGP_CAROLIEiJ_G0020093	Poldip3	100	91.211	ENSECAG00000018350	POLDIP3	100	91.211	Equus_caballus
MGP_CAROLIEiJ_G0020093	Poldip3	86	72.376	ENSEEUG00000001290	POLDIP3	100	72.376	Erinaceus_europaeus
MGP_CAROLIEiJ_G0020093	Poldip3	100	45.492	ENSELUG00000009005	poldip3	90	44.489	Esox_lucius
MGP_CAROLIEiJ_G0020093	Poldip3	100	90.306	ENSFCAG00000032029	POLDIP3	100	90.306	Felis_catus
MGP_CAROLIEiJ_G0020093	Poldip3	100	73.872	ENSFALG00000011621	POLDIP3	86	74.347	Ficedula_albicollis
MGP_CAROLIEiJ_G0020093	Poldip3	100	86.461	ENSFDAG00000019550	POLDIP3	100	86.461	Fukomys_damarensis
MGP_CAROLIEiJ_G0020093	Poldip3	100	51.174	ENSFHEG00000006083	poldip3	100	51.508	Fundulus_heteroclitus
MGP_CAROLIEiJ_G0020093	Poldip3	100	49.312	ENSGMOG00000006232	poldip3	100	50.345	Gadus_morhua
MGP_CAROLIEiJ_G0020093	Poldip3	100	73.634	ENSGALG00000011863	POLDIP3	100	73.634	Gallus_gallus
MGP_CAROLIEiJ_G0020093	Poldip3	100	39.655	ENSGAFG00000017465	poldip3	95	47.512	Gambusia_affinis
MGP_CAROLIEiJ_G0020093	Poldip3	100	47.797	ENSGACG00000007224	poldip3	100	48.238	Gasterosteus_aculeatus
MGP_CAROLIEiJ_G0020093	Poldip3	100	76.123	ENSGAGG00000014629	POLDIP3	96	76.123	Gopherus_agassizii
MGP_CAROLIEiJ_G0020093	Poldip3	100	90.736	ENSGGOG00000014961	POLDIP3	100	90.736	Gorilla_gorilla
MGP_CAROLIEiJ_G0020093	Poldip3	100	44.356	ENSHBUG00000021806	poldip3	82	44.970	Haplochromis_burtoni
MGP_CAROLIEiJ_G0020093	Poldip3	100	89.549	ENSHGLG00000013156	POLDIP3	100	89.549	Heterocephalus_glaber_female
MGP_CAROLIEiJ_G0020093	Poldip3	100	89.549	ENSHGLG00100009086	POLDIP3	100	89.549	Heterocephalus_glaber_male
MGP_CAROLIEiJ_G0020093	Poldip3	100	41.283	ENSHCOG00000005823	poldip3	98	43.505	Hippocampus_comes
MGP_CAROLIEiJ_G0020093	Poldip3	100	47.458	ENSIPUG00000000564	poldip3	100	47.343	Ictalurus_punctatus
MGP_CAROLIEiJ_G0020093	Poldip3	95	91.771	ENSSTOG00000008230	POLDIP3	100	91.771	Ictidomys_tridecemlineatus
MGP_CAROLIEiJ_G0020093	Poldip3	100	89.549	ENSJJAG00000018034	Poldip3	100	89.786	Jaculus_jaculus
MGP_CAROLIEiJ_G0020093	Poldip3	100	41.582	ENSKMAG00000013839	poldip3	100	41.785	Kryptolebias_marmoratus
MGP_CAROLIEiJ_G0020093	Poldip3	100	90.024	ENSLAFG00000014901	POLDIP3	98	90.024	Loxodonta_africana
MGP_CAROLIEiJ_G0020093	Poldip3	100	90.736	ENSMFAG00000044670	POLDIP3	100	90.736	Macaca_fascicularis
MGP_CAROLIEiJ_G0020093	Poldip3	100	90.736	ENSMMUG00000047046	POLDIP3	100	90.736	Macaca_mulatta
MGP_CAROLIEiJ_G0020093	Poldip3	100	90.736	ENSMNEG00000037068	POLDIP3	100	90.736	Macaca_nemestrina
MGP_CAROLIEiJ_G0020093	Poldip3	100	48.434	ENSMAMG00000009151	poldip3	87	71.166	Mastacembelus_armatus
MGP_CAROLIEiJ_G0020093	Poldip3	100	44.752	ENSMZEG00005005201	poldip3	100	44.970	Maylandia_zebra
MGP_CAROLIEiJ_G0020093	Poldip3	95	72.886	ENSMGAG00000011986	POLDIP3	100	72.886	Meleagris_gallopavo
MGP_CAROLIEiJ_G0020093	Poldip3	97	88.293	ENSMAUG00000014002	Poldip3	99	88.293	Mesocricetus_auratus
MGP_CAROLIEiJ_G0020093	Poldip3	100	90.974	ENSMICG00000041767	POLDIP3	100	90.974	Microcebus_murinus
MGP_CAROLIEiJ_G0020093	Poldip3	100	94.062	ENSMOCG00000014101	Poldip3	100	94.062	Microtus_ochrogaster
MGP_CAROLIEiJ_G0020093	Poldip3	86	49.296	ENSMMOG00000004982	poldip3	97	48.732	Mola_mola
MGP_CAROLIEiJ_G0020093	Poldip3	96	76.049	ENSMODG00000006932	-	57	76.049	Monodelphis_domestica
MGP_CAROLIEiJ_G0020093	Poldip3	100	98.571	ENSMUSG00000041815	Poldip3	100	98.571	Mus_musculus
MGP_CAROLIEiJ_G0020093	Poldip3	100	97.143	MGP_PahariEiJ_G0020100	Poldip3	100	97.143	Mus_pahari
MGP_CAROLIEiJ_G0020093	Poldip3	100	99.048	MGP_SPRETEiJ_G0020991	Poldip3	100	99.048	Mus_spretus
MGP_CAROLIEiJ_G0020093	Poldip3	100	90.024	ENSMPUG00000016314	POLDIP3	100	90.024	Mustela_putorius_furo
MGP_CAROLIEiJ_G0020093	Poldip3	99	85.919	ENSMLUG00000012408	POLDIP3	99	85.919	Myotis_lucifugus
MGP_CAROLIEiJ_G0020093	Poldip3	100	92.143	ENSNGAG00000000210	Poldip3	100	92.143	Nannospalax_galili
MGP_CAROLIEiJ_G0020093	Poldip3	100	45.129	ENSNBRG00000001837	poldip3	100	45.129	Neolamprologus_brichardi
MGP_CAROLIEiJ_G0020093	Poldip3	100	90.306	ENSNLEG00000015950	POLDIP3	100	90.306	Nomascus_leucogenys
MGP_CAROLIEiJ_G0020093	Poldip3	100	77.672	ENSMEUG00000013932	POLDIP3	100	77.672	Notamacropus_eugenii
MGP_CAROLIEiJ_G0020093	Poldip3	100	88.599	ENSODEG00000014224	POLDIP3	100	88.599	Octodon_degus
MGP_CAROLIEiJ_G0020093	Poldip3	100	42.885	ENSONIG00000008367	poldip3	100	42.885	Oreochromis_niloticus
MGP_CAROLIEiJ_G0020093	Poldip3	97	70.048	ENSOANG00000011029	POLDIP3	98	70.048	Ornithorhynchus_anatinus
MGP_CAROLIEiJ_G0020093	Poldip3	100	88.571	ENSOCUG00000016133	POLDIP3	99	88.571	Oryctolagus_cuniculus
MGP_CAROLIEiJ_G0020093	Poldip3	100	47.319	ENSORLG00000014799	poldip3	100	47.917	Oryzias_latipes
MGP_CAROLIEiJ_G0020093	Poldip3	100	43.354	ENSORLG00020006113	poldip3	100	42.828	Oryzias_latipes_hni
MGP_CAROLIEiJ_G0020093	Poldip3	100	43.675	ENSORLG00015018234	poldip3	100	44.076	Oryzias_latipes_hsok
MGP_CAROLIEiJ_G0020093	Poldip3	100	41.968	ENSOMEG00000007071	poldip3	100	41.767	Oryzias_melastigma
MGP_CAROLIEiJ_G0020093	Poldip3	100	91.211	ENSOGAG00000008216	POLDIP3	100	91.211	Otolemur_garnettii
MGP_CAROLIEiJ_G0020093	Poldip3	100	91.686	ENSOARG00000018993	POLDIP3	100	91.686	Ovis_aries
MGP_CAROLIEiJ_G0020093	Poldip3	100	90.974	ENSPPAG00000036619	POLDIP3	100	90.974	Pan_paniscus
MGP_CAROLIEiJ_G0020093	Poldip3	100	90.561	ENSPPRG00000021188	POLDIP3	100	90.561	Panthera_pardus
MGP_CAROLIEiJ_G0020093	Poldip3	100	90.561	ENSPTIG00000021396	POLDIP3	100	90.561	Panthera_tigris_altaica
MGP_CAROLIEiJ_G0020093	Poldip3	100	90.974	ENSPTRG00000014460	POLDIP3	100	90.974	Pan_troglodytes
MGP_CAROLIEiJ_G0020093	Poldip3	100	90.736	ENSPANG00000007026	POLDIP3	100	90.736	Papio_anubis
MGP_CAROLIEiJ_G0020093	Poldip3	96	46.170	ENSPKIG00000002188	poldip3	90	46.791	Paramormyrops_kingsleyae
MGP_CAROLIEiJ_G0020093	Poldip3	96	43.205	ENSPKIG00000007231	poldip3	93	43.191	Paramormyrops_kingsleyae
MGP_CAROLIEiJ_G0020093	Poldip3	95	75.682	ENSPSIG00000006347	POLDIP3	100	75.682	Pelodiscus_sinensis
MGP_CAROLIEiJ_G0020093	Poldip3	100	94.076	ENSPEMG00000021065	Poldip3	100	94.076	Peromyscus_maniculatus_bairdii
MGP_CAROLIEiJ_G0020093	Poldip3	100	39.479	ENSPMAG00000004894	poldip3	93	38.913	Petromyzon_marinus
MGP_CAROLIEiJ_G0020093	Poldip3	100	77.197	ENSPCIG00000026194	POLDIP3	100	77.197	Phascolarctos_cinereus
MGP_CAROLIEiJ_G0020093	Poldip3	100	50.000	ENSPFOG00000000926	poldip3	100	48.848	Poecilia_formosa
MGP_CAROLIEiJ_G0020093	Poldip3	100	48.700	ENSPLAG00000005558	poldip3	100	49.289	Poecilia_latipinna
MGP_CAROLIEiJ_G0020093	Poldip3	100	40.771	ENSPMEG00000018286	poldip3	95	52.575	Poecilia_mexicana
MGP_CAROLIEiJ_G0020093	Poldip3	100	39.645	ENSPREG00000016505	poldip3	100	40.039	Poecilia_reticulata
MGP_CAROLIEiJ_G0020093	Poldip3	100	90.974	ENSPPYG00000011899	POLDIP3	100	90.974	Pongo_abelii
MGP_CAROLIEiJ_G0020093	Poldip3	100	90.499	ENSPCAG00000009424	POLDIP3	100	90.499	Procavia_capensis
MGP_CAROLIEiJ_G0020093	Poldip3	100	91.686	ENSPCOG00000020271	POLDIP3	100	91.686	Propithecus_coquereli
MGP_CAROLIEiJ_G0020093	Poldip3	100	90.024	ENSPVAG00000014131	POLDIP3	100	90.024	Pteropus_vampyrus
MGP_CAROLIEiJ_G0020093	Poldip3	100	44.841	ENSPNYG00000020333	poldip3	100	44.970	Pundamilia_nyererei
MGP_CAROLIEiJ_G0020093	Poldip3	100	45.472	ENSPNAG00000023036	poldip3	100	46.654	Pygocentrus_nattereri
MGP_CAROLIEiJ_G0020093	Poldip3	100	95.952	ENSRNOG00000022877	Poldip3	100	95.952	Rattus_norvegicus
MGP_CAROLIEiJ_G0020093	Poldip3	100	91.211	ENSRBIG00000041676	POLDIP3	100	91.211	Rhinopithecus_bieti
MGP_CAROLIEiJ_G0020093	Poldip3	100	91.211	ENSRROG00000022379	POLDIP3	100	91.211	Rhinopithecus_roxellana
MGP_CAROLIEiJ_G0020093	Poldip3	100	90.261	ENSSBOG00000021779	-	100	90.261	Saimiri_boliviensis_boliviensis
MGP_CAROLIEiJ_G0020093	Poldip3	100	72.209	ENSSBOG00000025315	-	100	71.971	Saimiri_boliviensis_boliviensis
MGP_CAROLIEiJ_G0020093	Poldip3	100	76.247	ENSSHAG00000005316	POLDIP3	98	76.247	Sarcophilus_harrisii
MGP_CAROLIEiJ_G0020093	Poldip3	96	48.148	ENSSFOG00015012429	-	97	49.691	Scleropages_formosus
MGP_CAROLIEiJ_G0020093	Poldip3	100	41.199	ENSSFOG00015012582	poldip3	100	41.586	Scleropages_formosus
MGP_CAROLIEiJ_G0020093	Poldip3	100	49.880	ENSSMAG00000004609	poldip3	100	49.282	Scophthalmus_maximus
MGP_CAROLIEiJ_G0020093	Poldip3	100	40.800	ENSSDUG00000016881	poldip3	94	50.000	Seriola_dumerili
MGP_CAROLIEiJ_G0020093	Poldip3	100	40.600	ENSSLDG00000024763	poldip3	100	41.082	Seriola_lalandi_dorsalis
MGP_CAROLIEiJ_G0020093	Poldip3	95	78.109	ENSSARG00000011587	POLDIP3	95	78.109	Sorex_araneus
MGP_CAROLIEiJ_G0020093	Poldip3	100	73.821	ENSSPUG00000005362	POLDIP3	96	73.821	Sphenodon_punctatus
MGP_CAROLIEiJ_G0020093	Poldip3	100	91.924	ENSSSCG00000000039	POLDIP3	100	91.924	Sus_scrofa
MGP_CAROLIEiJ_G0020093	Poldip3	100	75.177	ENSTGUG00000009622	-	98	75.177	Taeniopygia_guttata
MGP_CAROLIEiJ_G0020093	Poldip3	100	49.526	ENSTRUG00000006604	poldip3	100	49.052	Takifugu_rubripes
MGP_CAROLIEiJ_G0020093	Poldip3	100	49.669	ENSTNIG00000010841	poldip3	100	49.561	Tetraodon_nigroviridis
MGP_CAROLIEiJ_G0020093	Poldip3	100	90.024	ENSTBEG00000010978	POLDIP3	100	90.261	Tupaia_belangeri
MGP_CAROLIEiJ_G0020093	Poldip3	95	91.771	ENSTTRG00000015129	POLDIP3	100	91.771	Tursiops_truncatus
MGP_CAROLIEiJ_G0020093	Poldip3	100	90.024	ENSUAMG00000026181	POLDIP3	100	90.024	Ursus_americanus
MGP_CAROLIEiJ_G0020093	Poldip3	93	90.909	ENSUMAG00000020385	POLDIP3	98	87.923	Ursus_maritimus
MGP_CAROLIEiJ_G0020093	Poldip3	100	91.211	ENSVVUG00000002231	POLDIP3	100	91.211	Vulpes_vulpes
MGP_CAROLIEiJ_G0020093	Poldip3	100	61.036	ENSXETG00000013412	poldip3	100	59.424	Xenopus_tropicalis
MGP_CAROLIEiJ_G0020093	Poldip3	87	47.222	ENSXCOG00000015952	poldip3	95	47.074	Xiphophorus_couchianus
MGP_CAROLIEiJ_G0020093	Poldip3	100	39.652	ENSXMAG00000006152	poldip3	100	40.927	Xiphophorus_maculatus