EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_CAROLIEiJ_G0020134 (Gene tree)
Gene ID: 110310296
Gene Symbol: Trmu
Alias: 1110005N20Rik|1600025P05Rik|Trmt1
Full Name: tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase
Gene Type: protein_coding
Species: Mus_caroli
Status: putative
Strand: Plus strand
Length: 18984 bases
Position: chr15:79867690-79886673
Accession: 110310296
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CAROLIEiJ_P0039353	tRNA_Me_trans	PF03054.16	2e-140	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CAROLIEiJ_T0039356	-	666	-	MGP_CAROLIEiJ_P0039356	57 (aa)	-	-
MGP_CAROLIEiJ_T0039357	-	812	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0039354	-	314	-	MGP_CAROLIEiJ_P0039354	103 (aa)	-	-
MGP_CAROLIEiJ_T0039355	-	743	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0039352	-	468	-	MGP_CAROLIEiJ_P0039352	99 (aa)	-	UPI0001DD351F
MGP_CAROLIEiJ_T0039353	-	1541	XM_021183117	MGP_CAROLIEiJ_P0039353	417 (aa)	XP_021038776	UPI000A319481
MGP_CAROLIEiJ_T0039360	-	2066	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0039358	-	788	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0039359	-	853	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_CAROLIEiJ_G0020134's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CAROLIEiJ_G0020134's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_CAROLIEiJ_G0020134	Trmu	100	91.228	ENSG00000100416	TRMU	100	94.667	Homo_sapiens
MGP_CAROLIEiJ_G0020134	Trmu	100	67.866	ENSAPOG00000014458	trmu	100	67.866	Acanthochromis_polyacanthus
MGP_CAROLIEiJ_G0020134	Trmu	98	89.024	ENSAMEG00000003319	TRMU	98	89.024	Ailuropoda_melanoleuca
MGP_CAROLIEiJ_G0020134	Trmu	99	66.667	ENSACIG00000002101	trmu	99	66.667	Amphilophus_citrinellus
MGP_CAROLIEiJ_G0020134	Trmu	100	68.345	ENSAOCG00000013155	trmu	100	68.345	Amphiprion_ocellaris
MGP_CAROLIEiJ_G0020134	Trmu	100	67.866	ENSAPEG00000013350	trmu	100	67.866	Amphiprion_percula
MGP_CAROLIEiJ_G0020134	Trmu	100	67.626	ENSATEG00000007814	trmu	100	67.626	Anabas_testudineus
MGP_CAROLIEiJ_G0020134	Trmu	88	84.000	ENSAPLG00000016380	TRMU	98	78.068	Anas_platyrhynchos
MGP_CAROLIEiJ_G0020134	Trmu	100	75.779	ENSACAG00000007720	TRMU	100	75.779	Anolis_carolinensis
MGP_CAROLIEiJ_G0020134	Trmu	98	87.561	ENSANAG00000038053	TRMU	97	87.561	Aotus_nancymaae
MGP_CAROLIEiJ_G0020134	Trmu	99	68.127	ENSACLG00000005395	trmu	99	68.127	Astatotilapia_calliptera
MGP_CAROLIEiJ_G0020134	Trmu	88	80.460	ENSAMXG00000005282	trmu	99	70.098	Astyanax_mexicanus
MGP_CAROLIEiJ_G0020134	Trmu	99	87.019	ENSBTAG00000005595	TRMU	99	87.019	Bos_taurus
MGP_CAROLIEiJ_G0020134	Trmu	95	45.000	WBGene00007114	mttu-1	98	39.433	Caenorhabditis_elegans
MGP_CAROLIEiJ_G0020134	Trmu	98	86.585	ENSCJAG00000000198	TRMU	97	86.585	Callithrix_jacchus
MGP_CAROLIEiJ_G0020134	Trmu	98	90.220	ENSCAFG00000000779	TRMU	98	88.969	Canis_familiaris
MGP_CAROLIEiJ_G0020134	Trmu	98	90.220	ENSCAFG00020009184	TRMU	98	88.969	Canis_lupus_dingo
MGP_CAROLIEiJ_G0020134	Trmu	100	87.770	ENSCHIG00000017074	TRMU	100	87.770	Capra_hircus
MGP_CAROLIEiJ_G0020134	Trmu	99	87.500	ENSTSYG00000003853	TRMU	99	87.500	Carlito_syrichta
MGP_CAROLIEiJ_G0020134	Trmu	96	82.578	ENSCAPG00000013034	TRMU	98	82.578	Cavia_aperea
MGP_CAROLIEiJ_G0020134	Trmu	99	87.711	ENSCPOG00000020780	TRMU	99	87.711	Cavia_porcellus
MGP_CAROLIEiJ_G0020134	Trmu	99	86.988	ENSCCAG00000021641	TRMU	99	86.988	Cebus_capucinus
MGP_CAROLIEiJ_G0020134	Trmu	99	86.635	ENSCATG00000032800	TRMU	99	86.635	Cercocebus_atys
MGP_CAROLIEiJ_G0020134	Trmu	99	90.120	ENSCLAG00000017269	TRMU	99	90.120	Chinchilla_lanigera
MGP_CAROLIEiJ_G0020134	Trmu	99	87.351	ENSCSAG00000005279	TRMU	99	87.351	Chlorocebus_sabaeus
MGP_CAROLIEiJ_G0020134	Trmu	88	84.000	ENSCPBG00000011621	TRMU	93	79.301	Chrysemys_picta_bellii
MGP_CAROLIEiJ_G0020134	Trmu	98	47.525	ENSCING00000019371	-	96	46.056	Ciona_intestinalis
MGP_CAROLIEiJ_G0020134	Trmu	99	86.874	ENSCANG00000041645	TRMU	99	86.874	Colobus_angolensis_palliatus
MGP_CAROLIEiJ_G0020134	Trmu	99	94.952	ENSCGRG00001001739	Trmu	99	94.952	Cricetulus_griseus_chok1gshd
MGP_CAROLIEiJ_G0020134	Trmu	89	98.039	ENSCGRG00000002781	Trmu	99	87.019	Cricetulus_griseus_crigri
MGP_CAROLIEiJ_G0020134	Trmu	83	82.927	ENSCSEG00000012382	trmu	99	66.346	Cynoglossus_semilaevis
MGP_CAROLIEiJ_G0020134	Trmu	100	68.345	ENSCVAG00000001366	trmu	100	68.345	Cyprinodon_variegatus
MGP_CAROLIEiJ_G0020134	Trmu	99	66.024	ENSDARG00000043734	trmu	99	66.024	Danio_rerio
MGP_CAROLIEiJ_G0020134	Trmu	54	83.700	ENSDNOG00000047245	-	84	80.000	Dasypus_novemcinctus
MGP_CAROLIEiJ_G0020134	Trmu	98	88.480	ENSDORG00000007455	Trmu	99	88.480	Dipodomys_ordii
MGP_CAROLIEiJ_G0020134	Trmu	89	41.555	FBgn0040337	CG3021	99	41.235	Drosophila_melanogaster
MGP_CAROLIEiJ_G0020134	Trmu	82	87.654	ENSETEG00000009394	-	66	86.441	Echinops_telfairi
MGP_CAROLIEiJ_G0020134	Trmu	93	55.243	ENSEBUG00000007454	trmu	98	54.252	Eptatretus_burgeri
MGP_CAROLIEiJ_G0020134	Trmu	98	88.998	ENSEASG00005021725	TRMU	99	88.010	Equus_asinus_asinus
MGP_CAROLIEiJ_G0020134	Trmu	98	88.998	ENSECAG00000000467	TRMU	99	88.010	Equus_caballus
MGP_CAROLIEiJ_G0020134	Trmu	70	87.500	ENSEEUG00000000074	-	78	88.889	Erinaceus_europaeus
MGP_CAROLIEiJ_G0020134	Trmu	83	80.488	ENSELUG00000009464	trmu	99	66.576	Esox_lucius
MGP_CAROLIEiJ_G0020134	Trmu	98	88.753	ENSFCAG00000006533	TRMU	99	87.952	Felis_catus
MGP_CAROLIEiJ_G0020134	Trmu	88	86.000	ENSFALG00000010035	TRMU	96	77.895	Ficedula_albicollis
MGP_CAROLIEiJ_G0020134	Trmu	93	88.372	ENSFDAG00000017472	TRMU	98	88.372	Fukomys_damarensis
MGP_CAROLIEiJ_G0020134	Trmu	100	68.345	ENSFHEG00000003162	trmu	100	68.345	Fundulus_heteroclitus
MGP_CAROLIEiJ_G0020134	Trmu	97	62.162	ENSGMOG00000001323	trmu	100	62.162	Gadus_morhua
MGP_CAROLIEiJ_G0020134	Trmu	88	86.000	ENSGALG00000031922	TRMU	96	77.641	Gallus_gallus
MGP_CAROLIEiJ_G0020134	Trmu	100	75.758	ENSGAFG00000013331	trmu	100	75.758	Gambusia_affinis
MGP_CAROLIEiJ_G0020134	Trmu	96	66.256	ENSGACG00000019024	trmu	96	66.256	Gasterosteus_aculeatus
MGP_CAROLIEiJ_G0020134	Trmu	99	88.544	ENSGGOG00000000203	TRMU	99	88.544	Gorilla_gorilla
MGP_CAROLIEiJ_G0020134	Trmu	99	67.640	ENSHBUG00000023421	trmu	99	67.640	Haplochromis_burtoni
MGP_CAROLIEiJ_G0020134	Trmu	99	87.260	ENSHGLG00000009278	TRMU	99	87.260	Heterocephalus_glaber_female
MGP_CAROLIEiJ_G0020134	Trmu	99	87.260	ENSHGLG00100018863	TRMU	99	87.260	Heterocephalus_glaber_male
MGP_CAROLIEiJ_G0020134	Trmu	83	84.146	ENSHCOG00000013459	trmu	96	70.781	Hippocampus_comes
MGP_CAROLIEiJ_G0020134	Trmu	98	67.892	ENSIPUG00000009785	trmu	100	67.892	Ictalurus_punctatus
MGP_CAROLIEiJ_G0020134	Trmu	99	89.880	ENSSTOG00000010993	TRMU	99	89.880	Ictidomys_tridecemlineatus
MGP_CAROLIEiJ_G0020134	Trmu	99	91.106	ENSJJAG00000000667	Trmu	99	91.106	Jaculus_jaculus
MGP_CAROLIEiJ_G0020134	Trmu	100	67.386	ENSKMAG00000008516	trmu	100	67.386	Kryptolebias_marmoratus
MGP_CAROLIEiJ_G0020134	Trmu	97	68.642	ENSLBEG00000018831	trmu	97	68.642	Labrus_bergylta
MGP_CAROLIEiJ_G0020134	Trmu	99	72.289	ENSLACG00000013713	TRMU	99	72.289	Latimeria_chalumnae
MGP_CAROLIEiJ_G0020134	Trmu	96	72.932	ENSLOCG00000016066	trmu	95	72.932	Lepisosteus_oculatus
MGP_CAROLIEiJ_G0020134	Trmu	99	74.641	ENSLAFG00000005129	TRMU	99	74.641	Loxodonta_africana
MGP_CAROLIEiJ_G0020134	Trmu	99	87.351	ENSMFAG00000039767	TRMU	99	87.351	Macaca_fascicularis
MGP_CAROLIEiJ_G0020134	Trmu	99	87.351	ENSMMUG00000000807	TRMU	99	87.351	Macaca_mulatta
MGP_CAROLIEiJ_G0020134	Trmu	99	87.351	ENSMNEG00000028164	TRMU	99	87.351	Macaca_nemestrina
MGP_CAROLIEiJ_G0020134	Trmu	99	86.874	ENSMLEG00000033884	TRMU	99	86.874	Mandrillus_leucophaeus
MGP_CAROLIEiJ_G0020134	Trmu	96	69.674	ENSMAMG00000004717	trmu	96	69.674	Mastacembelus_armatus
MGP_CAROLIEiJ_G0020134	Trmu	99	68.127	ENSMZEG00005015797	trmu	99	68.127	Maylandia_zebra
MGP_CAROLIEiJ_G0020134	Trmu	88	84.000	ENSMGAG00000007550	TRMU	95	76.074	Meleagris_gallopavo
MGP_CAROLIEiJ_G0020134	Trmu	99	94.712	ENSMAUG00000022282	Trmu	99	94.712	Mesocricetus_auratus
MGP_CAROLIEiJ_G0020134	Trmu	99	89.104	ENSMICG00000029046	TRMU	100	89.104	Microcebus_murinus
MGP_CAROLIEiJ_G0020134	Trmu	99	95.192	ENSMOCG00000014641	Trmu	99	95.192	Microtus_ochrogaster
MGP_CAROLIEiJ_G0020134	Trmu	97	68.983	ENSMMOG00000007229	trmu	97	68.983	Mola_mola
MGP_CAROLIEiJ_G0020134	Trmu	99	77.778	ENSMODG00000007433	TRMU	96	77.778	Monodelphis_domestica
MGP_CAROLIEiJ_G0020134	Trmu	83	80.488	ENSMALG00000007721	trmu	96	67.419	Monopterus_albus
MGP_CAROLIEiJ_G0020134	Trmu	100	100.000	ENSMUSG00000022386	Trmu	100	100.000	Mus_musculus
MGP_CAROLIEiJ_G0020134	Trmu	100	100.000	MGP_PahariEiJ_G0020139	Trmu	100	100.000	Mus_pahari
MGP_CAROLIEiJ_G0020134	Trmu	100	100.000	MGP_SPRETEiJ_G0021031	Trmu	100	100.000	Mus_spretus
MGP_CAROLIEiJ_G0020134	Trmu	99	87.711	ENSMPUG00000002523	TRMU	99	87.711	Mustela_putorius_furo
MGP_CAROLIEiJ_G0020134	Trmu	99	92.289	ENSNGAG00000005132	Trmu	99	92.289	Nannospalax_galili
MGP_CAROLIEiJ_G0020134	Trmu	99	67.883	ENSNBRG00000022690	trmu	100	68.473	Neolamprologus_brichardi
MGP_CAROLIEiJ_G0020134	Trmu	99	87.112	ENSNLEG00000015773	TRMU	99	87.112	Nomascus_leucogenys
MGP_CAROLIEiJ_G0020134	Trmu	99	60.784	ENSMEUG00000000216	TRMU	99	69.817	Notamacropus_eugenii
MGP_CAROLIEiJ_G0020134	Trmu	99	88.434	ENSODEG00000014745	TRMU	99	88.434	Octodon_degus
MGP_CAROLIEiJ_G0020134	Trmu	99	67.883	ENSONIG00000009821	trmu	99	67.883	Oreochromis_niloticus
MGP_CAROLIEiJ_G0020134	Trmu	92	75.844	ENSOANG00000001891	TRMU	97	75.844	Ornithorhynchus_anatinus
MGP_CAROLIEiJ_G0020134	Trmu	93	88.689	ENSOCUG00000003664	TRMU	97	86.978	Oryctolagus_cuniculus
MGP_CAROLIEiJ_G0020134	Trmu	98	66.586	ENSORLG00000019015	trmu	99	66.586	Oryzias_latipes
MGP_CAROLIEiJ_G0020134	Trmu	98	66.344	ENSORLG00020006830	trmu	99	66.344	Oryzias_latipes_hni
MGP_CAROLIEiJ_G0020134	Trmu	98	66.344	ENSORLG00015003907	trmu	99	66.344	Oryzias_latipes_hsok
MGP_CAROLIEiJ_G0020134	Trmu	100	72.727	ENSOMEG00000015518	-	100	72.727	Oryzias_melastigma
MGP_CAROLIEiJ_G0020134	Trmu	58	63.750	ENSOMEG00000015541	trmu	86	63.750	Oryzias_melastigma
MGP_CAROLIEiJ_G0020134	Trmu	99	87.260	ENSOGAG00000008096	TRMU	99	87.260	Otolemur_garnettii
MGP_CAROLIEiJ_G0020134	Trmu	100	79.856	ENSOARG00000019475	TRMU	100	79.856	Ovis_aries
MGP_CAROLIEiJ_G0020134	Trmu	99	88.544	ENSPPAG00000033944	TRMU	99	88.544	Pan_paniscus
MGP_CAROLIEiJ_G0020134	Trmu	97	89.630	ENSPPRG00000004197	TRMU	99	88.193	Panthera_pardus
MGP_CAROLIEiJ_G0020134	Trmu	88	90.000	ENSPTIG00000014122	TRMU	98	89.098	Panthera_tigris_altaica
MGP_CAROLIEiJ_G0020134	Trmu	99	88.544	ENSPTRG00000014510	TRMU	99	88.544	Pan_troglodytes
MGP_CAROLIEiJ_G0020134	Trmu	95	90.127	ENSPANG00000023074	TRMU	96	87.258	Papio_anubis
MGP_CAROLIEiJ_G0020134	Trmu	96	68.672	ENSPKIG00000002849	trmu	96	68.672	Paramormyrops_kingsleyae
MGP_CAROLIEiJ_G0020134	Trmu	88	90.000	ENSPSIG00000013020	TRMU	95	81.044	Pelodiscus_sinensis
MGP_CAROLIEiJ_G0020134	Trmu	83	84.146	ENSPMGG00000004083	trmu	99	69.024	Periophthalmus_magnuspinnatus
MGP_CAROLIEiJ_G0020134	Trmu	99	95.192	ENSPEMG00000014007	Trmu	99	95.192	Peromyscus_maniculatus_bairdii
MGP_CAROLIEiJ_G0020134	Trmu	96	78.500	ENSPCIG00000009923	TRMU	97	77.108	Phascolarctos_cinereus
MGP_CAROLIEiJ_G0020134	Trmu	94	67.677	ENSPFOG00000008197	trmu	88	67.677	Poecilia_formosa
MGP_CAROLIEiJ_G0020134	Trmu	98	69.682	ENSPLAG00000008414	trmu	98	69.682	Poecilia_latipinna
MGP_CAROLIEiJ_G0020134	Trmu	100	69.065	ENSPMEG00000004326	trmu	100	69.065	Poecilia_mexicana
MGP_CAROLIEiJ_G0020134	Trmu	98	69.682	ENSPREG00000007980	trmu	98	69.682	Poecilia_reticulata
MGP_CAROLIEiJ_G0020134	Trmu	99	88.783	ENSPPYG00000011949	TRMU	99	88.783	Pongo_abelii
MGP_CAROLIEiJ_G0020134	Trmu	88	86.000	ENSPCAG00000013462	TRMU	99	77.577	Procavia_capensis
MGP_CAROLIEiJ_G0020134	Trmu	99	88.702	ENSPCOG00000016539	TRMU	99	88.702	Propithecus_coquereli
MGP_CAROLIEiJ_G0020134	Trmu	83	93.902	ENSPVAG00000013202	TRMU	99	78.125	Pteropus_vampyrus
MGP_CAROLIEiJ_G0020134	Trmu	99	67.640	ENSPNYG00000005629	trmu	99	67.640	Pundamilia_nyererei
MGP_CAROLIEiJ_G0020134	Trmu	99	68.613	ENSPNAG00000006339	trmu	96	68.613	Pygocentrus_nattereri
MGP_CAROLIEiJ_G0020134	Trmu	100	96.643	ENSRNOG00000016465	Trmu	100	96.643	Rattus_norvegicus
MGP_CAROLIEiJ_G0020134	Trmu	99	86.635	ENSRBIG00000038973	TRMU	99	86.635	Rhinopithecus_bieti
MGP_CAROLIEiJ_G0020134	Trmu	99	86.874	ENSRROG00000004267	TRMU	99	86.874	Rhinopithecus_roxellana
MGP_CAROLIEiJ_G0020134	Trmu	96	31.068	YDL033C	SLM3	91	31.172	Saccharomyces_cerevisiae
MGP_CAROLIEiJ_G0020134	Trmu	98	88.293	ENSSBOG00000030184	TRMU	97	88.293	Saimiri_boliviensis_boliviensis
MGP_CAROLIEiJ_G0020134	Trmu	90	67.819	ENSSFOG00015020664	trmu	99	67.819	Scleropages_formosus
MGP_CAROLIEiJ_G0020134	Trmu	97	68.238	ENSSMAG00000019450	trmu	97	68.238	Scophthalmus_maximus
MGP_CAROLIEiJ_G0020134	Trmu	97	69.383	ENSSDUG00000011913	trmu	97	69.383	Seriola_dumerili
MGP_CAROLIEiJ_G0020134	Trmu	97	69.630	ENSSLDG00000011684	trmu	97	69.630	Seriola_lalandi_dorsalis
MGP_CAROLIEiJ_G0020134	Trmu	88	84.000	ENSSPUG00000017123	TRMU	94	69.095	Sphenodon_punctatus
MGP_CAROLIEiJ_G0020134	Trmu	100	67.866	ENSSPAG00000021875	trmu	100	67.866	Stegastes_partitus
MGP_CAROLIEiJ_G0020134	Trmu	98	87.745	ENSSSCG00000000007	TRMU	99	86.747	Sus_scrofa
MGP_CAROLIEiJ_G0020134	Trmu	88	84.000	ENSTGUG00000003663	-	100	78.552	Taeniopygia_guttata
MGP_CAROLIEiJ_G0020134	Trmu	90	79.775	ENSTRUG00000003403	-	89	79.775	Takifugu_rubripes
MGP_CAROLIEiJ_G0020134	Trmu	97	70.720	ENSTRUG00000001231	trmu	98	70.720	Takifugu_rubripes
MGP_CAROLIEiJ_G0020134	Trmu	99	69.734	ENSTNIG00000010484	trmu	97	69.734	Tetraodon_nigroviridis
MGP_CAROLIEiJ_G0020134	Trmu	93	54.005	ENSTBEG00000011276	-	99	54.005	Tupaia_belangeri
MGP_CAROLIEiJ_G0020134	Trmu	99	87.857	ENSTTRG00000004160	TRMU	99	87.857	Tursiops_truncatus
MGP_CAROLIEiJ_G0020134	Trmu	89	86.275	ENSUAMG00000024825	TRMU	97	90.378	Ursus_americanus
MGP_CAROLIEiJ_G0020134	Trmu	88	88.000	ENSUMAG00000019079	TRMU	97	89.883	Ursus_maritimus
MGP_CAROLIEiJ_G0020134	Trmu	88	84.000	ENSVPAG00000000685	-	100	75.342	Vicugna_pacos
MGP_CAROLIEiJ_G0020134	Trmu	99	89.157	ENSVVUG00000024963	TRMU	99	89.157	Vulpes_vulpes
MGP_CAROLIEiJ_G0020134	Trmu	98	72.993	ENSXETG00000023304	trmu	96	72.993	Xenopus_tropicalis
MGP_CAROLIEiJ_G0020134	Trmu	98	67.150	ENSXCOG00000015105	trmu	98	67.150	Xiphophorus_couchianus
MGP_CAROLIEiJ_G0020134	Trmu	98	69.193	ENSXMAG00000006697	trmu	98	69.193	Xiphophorus_maculatus