EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: MGP_CAROLIEiJ_G0020176 (Gene tree)
Gene ID: 110310503
Gene Symbol: Rabl2
Alias: 1110031N17Rik|Rabl2a
Full Name: RAB%2C member of RAS oncogene family like 2B
Gene Type: protein_coding
Species: Mus_caroli
Status: putative
Strand: Minus strand
Length: 9591 bases
Position: chr15:83535054-83544644
Accession: 110310503
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CAROLIEiJ_P0039506	MMR_HSR1	PF01926.23	6e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CAROLIEiJ_T0039510	-	487	-	MGP_CAROLIEiJ_P0039510	61 (aa)	-	-
MGP_CAROLIEiJ_T0039511	-	872	-	MGP_CAROLIEiJ_P0039511	64 (aa)	-	-
MGP_CAROLIEiJ_T0039512	-	170	-	MGP_CAROLIEiJ_P0039512	56 (aa)	-	-
MGP_CAROLIEiJ_T0039513	-	856	-	MGP_CAROLIEiJ_P0039513	74 (aa)	-	-
MGP_CAROLIEiJ_T0039514	-	1034	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0039515	-	541	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0039509	-	834	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0039508	-	887	-	MGP_CAROLIEiJ_P0039508	103 (aa)	-	-
MGP_CAROLIEiJ_T0039507	-	1785	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0039506	-	1595	XM_021183519	MGP_CAROLIEiJ_P0039506	226 (aa)	XP_021039178	UPI000A315118

Gene Model

Click here to download MGP_CAROLIEiJ_G0020176's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CAROLIEiJ_G0020176's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CAROLIEiJ_G0020176	Rabl2	69	34.146	MGP_CAROLIEiJ_G0029992	Rab30	79	34.146
MGP_CAROLIEiJ_G0020176	Rabl2	68	30.818	MGP_CAROLIEiJ_G0025227	Rab13	78	30.818
MGP_CAROLIEiJ_G0020176	Rabl2	66	37.580	MGP_CAROLIEiJ_G0016115	Rab1a	75	37.580
MGP_CAROLIEiJ_G0020176	Rabl2	64	31.126	MGP_CAROLIEiJ_G0032562	Mras	77	32.099
MGP_CAROLIEiJ_G0020176	Rabl2	66	37.908	MGP_CAROLIEiJ_G0032346	Rab11a	75	40.000
MGP_CAROLIEiJ_G0020176	Rabl2	66	37.908	MGP_CAROLIEiJ_G0022536	Rab1b	76	37.908
MGP_CAROLIEiJ_G0020176	Rabl2	72	34.524	MGP_CAROLIEiJ_G0033044	Rab33a	71	34.524
MGP_CAROLIEiJ_G0020176	Rabl2	74	33.708	MGP_CAROLIEiJ_G0033427	Rab9b	88	33.708
MGP_CAROLIEiJ_G0020176	Rabl2	83	31.250	MGP_CAROLIEiJ_G0019238	Rab2b	87	31.250
MGP_CAROLIEiJ_G0020176	Rabl2	77	30.220	MGP_CAROLIEiJ_G0016794	Rab34	67	30.220
MGP_CAROLIEiJ_G0020176	Rabl2	68	30.380	MGP_CAROLIEiJ_G0025171	Rab25	74	30.380
MGP_CAROLIEiJ_G0020176	Rabl2	81	34.197	MGP_CAROLIEiJ_G0024976	Rab33b	81	34.197
MGP_CAROLIEiJ_G0020176	Rabl2	74	33.520	MGP_CAROLIEiJ_G0033573	Rab9	87	33.520
MGP_CAROLIEiJ_G0020176	Rabl2	71	35.928	MGP_CAROLIEiJ_G0021741	Rab5a	84	36.538
MGP_CAROLIEiJ_G0020176	Rabl2	72	31.325	MGP_CAROLIEiJ_G0027632	Rab35	83	31.325
MGP_CAROLIEiJ_G0020176	Rabl2	68	34.177	MGP_CAROLIEiJ_G0023477	-	79	36.975
MGP_CAROLIEiJ_G0020176	Rabl2	66	32.680	MGP_CAROLIEiJ_G0032585	Rab6b	74	32.680
MGP_CAROLIEiJ_G0020176	Rabl2	76	32.386	MGP_CAROLIEiJ_G0021839	Rab12	60	32.386
MGP_CAROLIEiJ_G0020176	Rabl2	69	30.818	MGP_CAROLIEiJ_G0021830	Rab31	82	30.818
MGP_CAROLIEiJ_G0020176	Rabl2	68	36.943	MGP_CAROLIEiJ_G0021415	Rab11b	86	36.943
MGP_CAROLIEiJ_G0020176	Rabl2	66	34.641	MGP_CAROLIEiJ_G0025796	Rab2a	92	31.658
MGP_CAROLIEiJ_G0020176	Rabl2	64	32.000	MGP_CAROLIEiJ_G0017386	Rab37	69	32.000
MGP_CAROLIEiJ_G0020176	Rabl2	66	35.948	MGP_CAROLIEiJ_G0017184	Rab5c	71	35.948
MGP_CAROLIEiJ_G0020176	Rabl2	81	31.915	MGP_CAROLIEiJ_G0030051	Rab6a	88	31.915
MGP_CAROLIEiJ_G0020176	Rabl2	68	33.125	MGP_CAROLIEiJ_G0024752	Rab22a	81	33.125
MGP_CAROLIEiJ_G0020176	Rabl2	88	33.495	MGP_CAROLIEiJ_G0021978	Rab18	96	33.495

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_CAROLIEiJ_G0020176	Rabl2	98	84.163	ENSG00000079974	RABL2B	100	89.899	Homo_sapiens
MGP_CAROLIEiJ_G0020176	Rabl2	98	84.163	ENSG00000144134	RABL2A	98	90.909	Homo_sapiens
MGP_CAROLIEiJ_G0020176	Rabl2	97	73.636	ENSAPOG00000023708	rabl2	99	73.636	Acanthochromis_polyacanthus
MGP_CAROLIEiJ_G0020176	Rabl2	99	82.819	ENSAMEG00000003173	-	100	82.819	Ailuropoda_melanoleuca
MGP_CAROLIEiJ_G0020176	Rabl2	97	73.182	ENSACIG00000000670	rabl2	99	73.182	Amphilophus_citrinellus
MGP_CAROLIEiJ_G0020176	Rabl2	97	74.091	ENSAOCG00000008069	rabl2	99	74.091	Amphiprion_ocellaris
MGP_CAROLIEiJ_G0020176	Rabl2	97	73.636	ENSAPEG00000003164	rabl2	99	73.636	Amphiprion_percula
MGP_CAROLIEiJ_G0020176	Rabl2	98	72.973	ENSATEG00000001111	rabl2	99	72.973	Anabas_testudineus
MGP_CAROLIEiJ_G0020176	Rabl2	77	80.571	ENSACAG00000000418	-	99	80.571	Anolis_carolinensis
MGP_CAROLIEiJ_G0020176	Rabl2	98	84.163	ENSANAG00000021001	-	97	84.163	Aotus_nancymaae
MGP_CAROLIEiJ_G0020176	Rabl2	97	72.273	ENSACLG00000025632	rabl2	99	72.273	Astatotilapia_calliptera
MGP_CAROLIEiJ_G0020176	Rabl2	94	76.995	ENSAMXG00000040611	rabl2	96	76.995	Astyanax_mexicanus
MGP_CAROLIEiJ_G0020176	Rabl2	99	82.743	ENSBTAG00000004876	RABL2B	100	83.186	Bos_taurus
MGP_CAROLIEiJ_G0020176	Rabl2	98	84.163	ENSCJAG00000018414	-	97	84.163	Callithrix_jacchus
MGP_CAROLIEiJ_G0020176	Rabl2	99	87.892	ENSCAFG00020006938	-	100	87.892	Canis_lupus_dingo
MGP_CAROLIEiJ_G0020176	Rabl2	99	80.519	ENSCHIG00000000591	-	100	80.952	Capra_hircus
MGP_CAROLIEiJ_G0020176	Rabl2	98	84.615	ENSTSYG00000004323	-	97	84.615	Carlito_syrichta
MGP_CAROLIEiJ_G0020176	Rabl2	95	85.047	ENSCPOG00000026899	-	96	85.047	Cavia_porcellus
MGP_CAROLIEiJ_G0020176	Rabl2	98	85.520	ENSCCAG00000025944	-	97	85.520	Cebus_capucinus
MGP_CAROLIEiJ_G0020176	Rabl2	98	82.805	ENSCATG00000034307	-	97	82.805	Cercocebus_atys
MGP_CAROLIEiJ_G0020176	Rabl2	98	85.973	ENSCLAG00000017218	-	99	85.973	Chinchilla_lanigera
MGP_CAROLIEiJ_G0020176	Rabl2	99	83.408	ENSCSAG00000004698	-	97	83.408	Chlorocebus_sabaeus
MGP_CAROLIEiJ_G0020176	Rabl2	94	79.245	ENSCPBG00000011715	-	94	79.245	Chrysemys_picta_bellii
MGP_CAROLIEiJ_G0020176	Rabl2	83	65.957	ENSCING00000004961	-	87	65.957	Ciona_intestinalis
MGP_CAROLIEiJ_G0020176	Rabl2	80	67.778	ENSCSAVG00000006042	-	87	67.778	Ciona_savignyi
MGP_CAROLIEiJ_G0020176	Rabl2	98	83.258	ENSCANG00000030879	-	97	83.258	Colobus_angolensis_palliatus
MGP_CAROLIEiJ_G0020176	Rabl2	99	94.619	ENSCGRG00001021894	Rabl2	100	94.619	Cricetulus_griseus_chok1gshd
MGP_CAROLIEiJ_G0020176	Rabl2	90	74.384	ENSCSEG00000005479	rabl2	95	71.831	Cynoglossus_semilaevis
MGP_CAROLIEiJ_G0020176	Rabl2	97	72.727	ENSCVAG00000011432	rabl2	99	72.727	Cyprinodon_variegatus
MGP_CAROLIEiJ_G0020176	Rabl2	97	71.364	ENSDARG00000063321	rabl2	99	71.364	Danio_rerio
MGP_CAROLIEiJ_G0020176	Rabl2	98	86.937	ENSDNOG00000035151	-	99	86.937	Dasypus_novemcinctus
MGP_CAROLIEiJ_G0020176	Rabl2	99	85.650	ENSDORG00000000003	Rabl2	100	85.650	Dipodomys_ordii
MGP_CAROLIEiJ_G0020176	Rabl2	99	86.996	ENSEASG00005008239	-	100	86.996	Equus_asinus_asinus
MGP_CAROLIEiJ_G0020176	Rabl2	99	86.996	ENSECAG00000026942	-	100	86.996	Equus_caballus
MGP_CAROLIEiJ_G0020176	Rabl2	99	85.650	ENSFCAG00000033642	-	100	85.650	Felis_catus
MGP_CAROLIEiJ_G0020176	Rabl2	99	84.305	ENSFDAG00000002113	-	100	84.305	Fukomys_damarensis
MGP_CAROLIEiJ_G0020176	Rabl2	95	74.766	ENSFHEG00000015015	rabl2	81	74.766	Fundulus_heteroclitus
MGP_CAROLIEiJ_G0020176	Rabl2	87	74.112	ENSGMOG00000018928	rabl2	100	74.112	Gadus_morhua
MGP_CAROLIEiJ_G0020176	Rabl2	91	78.155	ENSGALG00000032458	RABL2B	92	78.155	Gallus_gallus
MGP_CAROLIEiJ_G0020176	Rabl2	85	78.646	ENSGAFG00000005188	rabl2	95	74.882	Gambusia_affinis
MGP_CAROLIEiJ_G0020176	Rabl2	97	69.545	ENSGACG00000012474	rabl2	99	69.545	Gasterosteus_aculeatus
MGP_CAROLIEiJ_G0020176	Rabl2	97	72.273	ENSHBUG00000010964	rabl2	99	72.273	Haplochromis_burtoni
MGP_CAROLIEiJ_G0020176	Rabl2	99	86.099	ENSHGLG00000005750	-	100	86.099	Heterocephalus_glaber_female
MGP_CAROLIEiJ_G0020176	Rabl2	99	86.099	ENSHGLG00100016281	-	100	86.099	Heterocephalus_glaber_male
MGP_CAROLIEiJ_G0020176	Rabl2	99	86.996	ENSSTOG00000002723	-	100	86.996	Ictidomys_tridecemlineatus
MGP_CAROLIEiJ_G0020176	Rabl2	99	90.583	ENSJJAG00000010792	Rabl2	100	90.583	Jaculus_jaculus
MGP_CAROLIEiJ_G0020176	Rabl2	97	73.182	ENSKMAG00000012723	rabl2	99	73.182	Kryptolebias_marmoratus
MGP_CAROLIEiJ_G0020176	Rabl2	97	74.091	ENSLBEG00000003644	rabl2	99	74.091	Labrus_bergylta
MGP_CAROLIEiJ_G0020176	Rabl2	98	74.324	ENSLACG00000003722	rabl2	99	74.324	Latimeria_chalumnae
MGP_CAROLIEiJ_G0020176	Rabl2	97	75.455	ENSLOCG00000016767	rabl2	96	75.455	Lepisosteus_oculatus
MGP_CAROLIEiJ_G0020176	Rabl2	98	84.163	ENSMFAG00000044775	-	97	84.163	Macaca_fascicularis
MGP_CAROLIEiJ_G0020176	Rabl2	98	84.163	ENSMMUG00000022914	RABL2B	97	84.163	Macaca_mulatta
MGP_CAROLIEiJ_G0020176	Rabl2	98	83.710	ENSMNEG00000028460	-	96	83.710	Macaca_nemestrina
MGP_CAROLIEiJ_G0020176	Rabl2	98	82.805	ENSMLEG00000032621	-	96	82.805	Mandrillus_leucophaeus
MGP_CAROLIEiJ_G0020176	Rabl2	97	72.727	ENSMAMG00000008168	rabl2	99	72.727	Mastacembelus_armatus
MGP_CAROLIEiJ_G0020176	Rabl2	97	70.000	ENSMZEG00005019758	rabl2	99	70.000	Maylandia_zebra
MGP_CAROLIEiJ_G0020176	Rabl2	98	94.595	ENSMAUG00000010955	Rabl2	100	94.595	Mesocricetus_auratus
MGP_CAROLIEiJ_G0020176	Rabl2	98	88.688	ENSMICG00000031301	-	97	88.688	Microcebus_murinus
MGP_CAROLIEiJ_G0020176	Rabl2	98	94.144	ENSMOCG00000002775	Rabl2	99	94.144	Microtus_ochrogaster
MGP_CAROLIEiJ_G0020176	Rabl2	94	84.112	ENSMODG00000010838	-	98	84.112	Monodelphis_domestica
MGP_CAROLIEiJ_G0020176	Rabl2	97	72.727	ENSMALG00000005944	rabl2	99	72.727	Monopterus_albus
MGP_CAROLIEiJ_G0020176	Rabl2	99	98.206	ENSMUSG00000022621	Rabl2	100	98.206	Mus_musculus
MGP_CAROLIEiJ_G0020176	Rabl2	99	97.758	MGP_PahariEiJ_G0020181	Rabl2	100	97.758	Mus_pahari
MGP_CAROLIEiJ_G0020176	Rabl2	99	98.655	MGP_SPRETEiJ_G0021073	Rabl2	100	98.655	Mus_spretus
MGP_CAROLIEiJ_G0020176	Rabl2	99	86.099	ENSMPUG00000001806	-	100	86.099	Mustela_putorius_furo
MGP_CAROLIEiJ_G0020176	Rabl2	98	90.991	ENSNGAG00000012843	Rabl2	96	90.991	Nannospalax_galili
MGP_CAROLIEiJ_G0020176	Rabl2	97	72.273	ENSNBRG00000000489	rabl2	99	72.273	Neolamprologus_brichardi
MGP_CAROLIEiJ_G0020176	Rabl2	98	83.258	ENSNLEG00000030435	-	96	83.258	Nomascus_leucogenys
MGP_CAROLIEiJ_G0020176	Rabl2	99	84.753	ENSODEG00000015650	-	100	84.753	Octodon_degus
MGP_CAROLIEiJ_G0020176	Rabl2	97	72.727	ENSONIG00000014885	rabl2	99	72.727	Oreochromis_niloticus
MGP_CAROLIEiJ_G0020176	Rabl2	93	73.810	ENSORLG00000009874	rabl2	93	73.810	Oryzias_latipes
MGP_CAROLIEiJ_G0020176	Rabl2	93	73.810	ENSORLG00020001721	rabl2	93	73.810	Oryzias_latipes_hni
MGP_CAROLIEiJ_G0020176	Rabl2	93	73.810	ENSORLG00015014268	rabl2	93	73.810	Oryzias_latipes_hsok
MGP_CAROLIEiJ_G0020176	Rabl2	92	74.038	ENSOMEG00000008576	rabl2	96	74.038	Oryzias_melastigma
MGP_CAROLIEiJ_G0020176	Rabl2	98	86.878	ENSOGAG00000009123	-	97	86.878	Otolemur_garnettii
MGP_CAROLIEiJ_G0020176	Rabl2	94	86.047	ENSPPRG00000014642	-	94	86.047	Panthera_pardus
MGP_CAROLIEiJ_G0020176	Rabl2	99	85.650	ENSPTIG00000018747	-	100	85.650	Panthera_tigris_altaica
MGP_CAROLIEiJ_G0020176	Rabl2	98	80.087	ENSPTRG00000014555	-	97	80.087	Pan_troglodytes
MGP_CAROLIEiJ_G0020176	Rabl2	97	79.565	ENSPANG00000036121	-	96	79.565	Papio_anubis
MGP_CAROLIEiJ_G0020176	Rabl2	91	79.126	ENSPKIG00000025372	rabl2	92	79.126	Paramormyrops_kingsleyae
MGP_CAROLIEiJ_G0020176	Rabl2	90	82.759	ENSPSIG00000014041	-	90	82.759	Pelodiscus_sinensis
MGP_CAROLIEiJ_G0020176	Rabl2	87	75.635	ENSPMGG00000012946	rabl2	96	75.635	Periophthalmus_magnuspinnatus
MGP_CAROLIEiJ_G0020176	Rabl2	99	95.067	ENSPEMG00000024045	Rabl2	100	95.067	Peromyscus_maniculatus_bairdii
MGP_CAROLIEiJ_G0020176	Rabl2	88	88.000	ENSPCIG00000012436	-	89	83.333	Phascolarctos_cinereus
MGP_CAROLIEiJ_G0020176	Rabl2	94	74.884	ENSPFOG00000017960	rabl2	95	74.884	Poecilia_formosa
MGP_CAROLIEiJ_G0020176	Rabl2	94	75.587	ENSPLAG00000015685	rabl2	95	75.587	Poecilia_latipinna
MGP_CAROLIEiJ_G0020176	Rabl2	94	75.587	ENSPMEG00000004703	rabl2	95	75.587	Poecilia_mexicana
MGP_CAROLIEiJ_G0020176	Rabl2	86	77.320	ENSPREG00000014761	rabl2	96	77.320	Poecilia_reticulata
MGP_CAROLIEiJ_G0020176	Rabl2	98	83.710	ENSPPYG00000012000	-	97	83.710	Pongo_abelii
MGP_CAROLIEiJ_G0020176	Rabl2	98	87.783	ENSPCOG00000024865	-	97	87.783	Propithecus_coquereli
MGP_CAROLIEiJ_G0020176	Rabl2	98	80.687	ENSPVAG00000004539	-	98	80.687	Pteropus_vampyrus
MGP_CAROLIEiJ_G0020176	Rabl2	97	72.273	ENSPNYG00000004845	rabl2	99	72.273	Pundamilia_nyererei
MGP_CAROLIEiJ_G0020176	Rabl2	89	79.602	ENSPNAG00000024254	rabl2	96	77.465	Pygocentrus_nattereri
MGP_CAROLIEiJ_G0020176	Rabl2	99	95.111	ENSRNOG00000013947	Rabl2	90	95.111	Rattus_norvegicus
MGP_CAROLIEiJ_G0020176	Rabl2	98	83.710	ENSRBIG00000033607	-	97	83.710	Rhinopithecus_bieti
MGP_CAROLIEiJ_G0020176	Rabl2	98	84.163	ENSRROG00000031130	-	97	84.163	Rhinopithecus_roxellana
MGP_CAROLIEiJ_G0020176	Rabl2	98	85.973	ENSSBOG00000033266	-	97	85.973	Saimiri_boliviensis_boliviensis
MGP_CAROLIEiJ_G0020176	Rabl2	90	77.941	ENSSFOG00015020738	rabl2	95	76.887	Scleropages_formosus
MGP_CAROLIEiJ_G0020176	Rabl2	95	74.766	ENSSMAG00000004606	rabl2	96	74.766	Scophthalmus_maximus
MGP_CAROLIEiJ_G0020176	Rabl2	97	73.182	ENSSDUG00000014765	rabl2	99	73.182	Seriola_dumerili
MGP_CAROLIEiJ_G0020176	Rabl2	75	89.412	ENSSSCG00000025041	-	100	89.412	Sus_scrofa
MGP_CAROLIEiJ_G0020176	Rabl2	91	75.243	ENSTGUG00000016028	-	99	75.243	Taeniopygia_guttata
MGP_CAROLIEiJ_G0020176	Rabl2	97	73.182	ENSTRUG00000012454	rabl2	99	73.182	Takifugu_rubripes
MGP_CAROLIEiJ_G0020176	Rabl2	97	73.182	ENSTNIG00000017951	rabl2	99	73.182	Tetraodon_nigroviridis
MGP_CAROLIEiJ_G0020176	Rabl2	89	86.634	ENSUAMG00000015761	-	90	86.634	Ursus_americanus
MGP_CAROLIEiJ_G0020176	Rabl2	99	85.333	ENSUMAG00000017116	-	100	85.202	Ursus_maritimus
MGP_CAROLIEiJ_G0020176	Rabl2	99	86.996	ENSVVUG00000025761	-	100	86.996	Vulpes_vulpes
MGP_CAROLIEiJ_G0020176	Rabl2	94	78.404	ENSXETG00000015712	rabl2b	95	78.404	Xenopus_tropicalis
MGP_CAROLIEiJ_G0020176	Rabl2	86	79.487	ENSXMAG00000004569	rabl2	95	76.056	Xiphophorus_maculatus