EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
MGP_CAROLIEiJ_G0020356 (Gene tree)
Gene ID
110310952
Gene Symbol
Tarbp2
Alias
Prbp|TRBP
Full Name
TARBP2%2C RISC loading complex RNA binding subunit
Gene Type
protein_coding
Species
Mus_caroli
Status
putative
Strand
Plus strand
Length
5459 bases
Position
chr15:96359642-96365100
Accession
110310952
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
MGP_CAROLIEiJ_P0040017dsrmPF00035.269.8e-3412
MGP_CAROLIEiJ_P0040017dsrmPF00035.269.8e-3422
MGP_CAROLIEiJ_P0040022dsrmPF00035.262.3e-3212
MGP_CAROLIEiJ_P0040022dsrmPF00035.262.3e-3222
MGP_CAROLIEiJ_P0040024dsrmPF00035.262.6e-3212
MGP_CAROLIEiJ_P0040024dsrmPF00035.262.6e-3222
MGP_CAROLIEiJ_P0040014dsrmPF00035.262.6e-1711
MGP_CAROLIEiJ_P0040022DND1_DSRMPF14709.75.6e-1111
MGP_CAROLIEiJ_P0040024DND1_DSRMPF14709.78.5e-1111
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
MGP_CAROLIEiJ_T0040020-951--- (aa)--
MGP_CAROLIEiJ_T0040021-716--- (aa)--
MGP_CAROLIEiJ_T0040023-482-MGP_CAROLIEiJ_P004002358 (aa)-UPI0001889C99
MGP_CAROLIEiJ_T0040022-1081-MGP_CAROLIEiJ_P0040022225 (aa)-UPI0001889C9B
MGP_CAROLIEiJ_T0040015-2700--- (aa)--
MGP_CAROLIEiJ_T0040014-1274-MGP_CAROLIEiJ_P0040014274 (aa)-UPI00005AC2AA
MGP_CAROLIEiJ_T0040017-1519XM_021184139MGP_CAROLIEiJ_P0040017365 (aa)XP_021039798UPI00000220B9
MGP_CAROLIEiJ_T0040016-370-MGP_CAROLIEiJ_P004001649 (aa)-UPI0001889C97
MGP_CAROLIEiJ_T0040024-782-MGP_CAROLIEiJ_P0040024243 (aa)-UPI0001889C9A
MGP_CAROLIEiJ_T0040025-700--- (aa)--
MGP_CAROLIEiJ_T0040013-1019--- (aa)--
MGP_CAROLIEiJ_T0040012-1802-MGP_CAROLIEiJ_P004001279 (aa)-UPI0001889C96
MGP_CAROLIEiJ_T0040019-416-MGP_CAROLIEiJ_P004001956 (aa)-UPI0001889C98
MGP_CAROLIEiJ_T0040018-711--- (aa)--
Gene Model
Click here to download MGP_CAROLIEiJ_G0020356's gene model file
Protein-Protein Interaction (PPI)

Clik here to download MGP_CAROLIEiJ_G0020356's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
MGP_CAROLIEiJ_G0020356Tarbp29154.717MGP_CAROLIEiJ_G0023688Prkra9442.614
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
MGP_CAROLIEiJ_G0020356Tarbp210095.133ENSG00000139546TARBP299100.000Homo_sapiens
MGP_CAROLIEiJ_G0020356Tarbp29192.453ENSAPOG00000019892tarbp210065.479Acanthochromis_polyacanthus
MGP_CAROLIEiJ_G0020356Tarbp210093.033ENSAMEG00000012601TARBP210092.350Ailuropoda_melanoleuca
MGP_CAROLIEiJ_G0020356Tarbp29192.453ENSACIG00000016780tarbp210064.932Amphilophus_citrinellus
MGP_CAROLIEiJ_G0020356Tarbp29192.453ENSAOCG00000005201tarbp210065.479Amphiprion_ocellaris
MGP_CAROLIEiJ_G0020356Tarbp29192.453ENSAPEG00000008376tarbp210065.479Amphiprion_percula
MGP_CAROLIEiJ_G0020356Tarbp29192.453ENSATEG00000025012tarbp210065.205Anabas_testudineus
MGP_CAROLIEiJ_G0020356Tarbp29196.226ENSACAG00000001100TARBP29574.425Anolis_carolinensis
MGP_CAROLIEiJ_G0020356Tarbp298100.000ENSANAG00000034453TARBP29998.718Aotus_nancymaae
MGP_CAROLIEiJ_G0020356Tarbp29192.453ENSACLG00000018569tarbp29566.379Astatotilapia_calliptera
MGP_CAROLIEiJ_G0020356Tarbp29194.340ENSAMXG00000016665tarbp29965.301Astyanax_mexicanus
MGP_CAROLIEiJ_G0020356Tarbp210092.896ENSBTAG00000000435TARBP210093.443Bos_taurus
MGP_CAROLIEiJ_G0020356Tarbp210093.852ENSCJAG00000018668TARBP210093.716Callithrix_jacchus
MGP_CAROLIEiJ_G0020356Tarbp210093.443ENSCAFG00000006874TARBP210092.623Canis_familiaris
MGP_CAROLIEiJ_G0020356Tarbp210095.133ENSCAFG00020020735TARBP210093.716Canis_lupus_dingo
MGP_CAROLIEiJ_G0020356Tarbp210091.351ENSCHIG00000026017TARBP210091.351Capra_hircus
MGP_CAROLIEiJ_G0020356Tarbp298100.000ENSTSYG00000035683TARBP29998.718Carlito_syrichta
MGP_CAROLIEiJ_G0020356Tarbp28292.889ENSCAPG00000008981TARBP210092.889Cavia_aperea
MGP_CAROLIEiJ_G0020356Tarbp210093.363ENSCPOG00000001009TARBP210090.984Cavia_porcellus
MGP_CAROLIEiJ_G0020356Tarbp298100.000ENSCCAG00000033025TARBP298100.000Cebus_capucinus
MGP_CAROLIEiJ_G0020356Tarbp298100.000ENSCATG00000026344TARBP29997.436Cercocebus_atys
MGP_CAROLIEiJ_G0020356Tarbp210094.690ENSCLAG00000009175TARBP210091.803Chinchilla_lanigera
MGP_CAROLIEiJ_G0020356Tarbp210094.262ENSCSAG00000005479TARBP210092.896Chlorocebus_sabaeus
MGP_CAROLIEiJ_G0020356Tarbp29196.226ENSCPBG00000000654TARBP210074.709Chrysemys_picta_bellii
MGP_CAROLIEiJ_G0020356Tarbp29898.246ENSCANG00000040415TARBP29898.246Colobus_angolensis_palliatus
MGP_CAROLIEiJ_G0020356Tarbp210097.942ENSCGRG00001011856TARBP210097.260Cricetulus_griseus_chok1gshd
MGP_CAROLIEiJ_G0020356Tarbp210097.942ENSCGRG00000009088TARBP210097.942Cricetulus_griseus_crigri
MGP_CAROLIEiJ_G0020356Tarbp29192.453ENSCSEG00000010631tarbp210066.575Cynoglossus_semilaevis
MGP_CAROLIEiJ_G0020356Tarbp29192.453ENSCVAG00000009832tarbp210066.027Cyprinodon_variegatus
MGP_CAROLIEiJ_G0020356Tarbp29192.453ENSDARG00000070471tarbp210065.479Danio_rerio
MGP_CAROLIEiJ_G0020356Tarbp210094.262ENSDNOG00000002144TARBP210093.716Dasypus_novemcinctus
MGP_CAROLIEiJ_G0020356Tarbp291100.000ENSDORG00000029983-99100.000Dipodomys_ordii
MGP_CAROLIEiJ_G0020356Tarbp29594.737ENSDORG00000001390Tarbp210094.737Dipodomys_ordii
MGP_CAROLIEiJ_G0020356Tarbp29497.297ENSETEG00000002458TARBP28496.226Echinops_telfairi
MGP_CAROLIEiJ_G0020356Tarbp28389.583ENSEBUG00000002377tarbp29855.460Eptatretus_burgeri
MGP_CAROLIEiJ_G0020356Tarbp210095.575ENSEASG00005010030TARBP210094.536Equus_asinus_asinus
MGP_CAROLIEiJ_G0020356Tarbp298100.000ENSECAG00000011695TARBP29998.718Equus_caballus
MGP_CAROLIEiJ_G0020356Tarbp29497.297ENSEEUG00000001128-9984.936Erinaceus_europaeus
MGP_CAROLIEiJ_G0020356Tarbp29192.453ENSELUG00000010642tarbp29666.952Esox_lucius
MGP_CAROLIEiJ_G0020356Tarbp210095.133ENSFCAG00000007757TARBP210093.169Felis_catus
MGP_CAROLIEiJ_G0020356Tarbp210093.805ENSFDAG00000011932TARBP210091.803Fukomys_damarensis
MGP_CAROLIEiJ_G0020356Tarbp29192.453ENSFHEG00000016118tarbp210067.442Fundulus_heteroclitus
MGP_CAROLIEiJ_G0020356Tarbp29192.453ENSGMOG00000001290tarbp210064.033Gadus_morhua
MGP_CAROLIEiJ_G0020356Tarbp29167.068ENSGALG00000038939-9864.179Gallus_gallus
MGP_CAROLIEiJ_G0020356Tarbp29190.566ENSGALG00000048019-8790.361Gallus_gallus
MGP_CAROLIEiJ_G0020356Tarbp29192.453ENSGAFG00000013341tarbp210065.205Gambusia_affinis
MGP_CAROLIEiJ_G0020356Tarbp29192.453ENSGACG00000006645tarbp210064.578Gasterosteus_aculeatus
MGP_CAROLIEiJ_G0020356Tarbp29196.226ENSGAGG00000021169TARBP210073.425Gopherus_agassizii
MGP_CAROLIEiJ_G0020356Tarbp298100.000ENSGGOG00000012637TARBP29997.436Gorilla_gorilla
MGP_CAROLIEiJ_G0020356Tarbp29192.453ENSHBUG00000018639tarbp210064.384Haplochromis_burtoni
MGP_CAROLIEiJ_G0020356Tarbp210094.248ENSHGLG00000001284TARBP210090.984Heterocephalus_glaber_female
MGP_CAROLIEiJ_G0020356Tarbp210094.248ENSHGLG00100011274TARBP210090.984Heterocephalus_glaber_male
MGP_CAROLIEiJ_G0020356Tarbp29192.453ENSHCOG00000001027tarbp210062.740Hippocampus_comes
MGP_CAROLIEiJ_G0020356Tarbp29192.453ENSIPUG00000023701tarbp29766.574Ictalurus_punctatus
MGP_CAROLIEiJ_G0020356Tarbp210093.716ENSSTOG00000003678TARBP210093.716Ictidomys_tridecemlineatus
MGP_CAROLIEiJ_G0020356Tarbp29188.679ENSJJAG00000014366-9582.192Jaculus_jaculus
MGP_CAROLIEiJ_G0020356Tarbp29498.649ENSJJAG00000007198-9999.074Jaculus_jaculus
MGP_CAROLIEiJ_G0020356Tarbp29192.453ENSKMAG00000012142tarbp210064.658Kryptolebias_marmoratus
MGP_CAROLIEiJ_G0020356Tarbp29192.453ENSLBEG00000015027tarbp210065.753Labrus_bergylta
MGP_CAROLIEiJ_G0020356Tarbp29194.340ENSLACG00000007087TARBP27888.889Latimeria_chalumnae
MGP_CAROLIEiJ_G0020356Tarbp29196.226ENSLOCG00000005711tarbp210067.302Lepisosteus_oculatus
MGP_CAROLIEiJ_G0020356Tarbp29198.113ENSLAFG00000002620TARBP210081.690Loxodonta_africana
MGP_CAROLIEiJ_G0020356Tarbp298100.000ENSMFAG00000013567TARBP29997.436Macaca_fascicularis
MGP_CAROLIEiJ_G0020356Tarbp210094.690ENSMMUG00000018492TARBP210093.443Macaca_mulatta
MGP_CAROLIEiJ_G0020356Tarbp298100.000ENSMNEG00000036477TARBP29997.436Macaca_nemestrina
MGP_CAROLIEiJ_G0020356Tarbp298100.000ENSMLEG00000029583TARBP29997.436Mandrillus_leucophaeus
MGP_CAROLIEiJ_G0020356Tarbp29192.453ENSMAMG00000010272tarbp29766.379Mastacembelus_armatus
MGP_CAROLIEiJ_G0020356Tarbp29192.453ENSMZEG00005006895tarbp210064.384Maylandia_zebra
MGP_CAROLIEiJ_G0020356Tarbp210097.942ENSMAUG00000019805Tarbp210096.986Mesocricetus_auratus
MGP_CAROLIEiJ_G0020356Tarbp298100.000ENSMICG00000027441TARBP29998.718Microcebus_murinus
MGP_CAROLIEiJ_G0020356Tarbp210095.473ENSMOCG00000003691Tarbp210095.068Microtus_ochrogaster
MGP_CAROLIEiJ_G0020356Tarbp29192.453ENSMMOG00000010374tarbp210067.442Mola_mola
MGP_CAROLIEiJ_G0020356Tarbp29192.453ENSMALG00000009773tarbp210064.850Monopterus_albus
MGP_CAROLIEiJ_G0020356Tarbp2100100.000ENSMUSG00000023051Tarbp2100100.000Mus_musculus
MGP_CAROLIEiJ_G0020356Tarbp2100100.000MGP_PahariEiJ_G0020355Tarbp2100100.000Mus_pahari
MGP_CAROLIEiJ_G0020356Tarbp2100100.000MGP_SPRETEiJ_G0021249Tarbp2100100.000Mus_spretus
MGP_CAROLIEiJ_G0020356Tarbp210094.667ENSMPUG00000005944TARBP210094.247Mustela_putorius_furo
MGP_CAROLIEiJ_G0020356Tarbp210094.690ENSMLUG00000010035TARBP210092.896Myotis_lucifugus
MGP_CAROLIEiJ_G0020356Tarbp29498.649ENSNGAG00000017769-9999.074Nannospalax_galili
MGP_CAROLIEiJ_G0020356Tarbp29192.453ENSNBRG00000011845-7088.372Neolamprologus_brichardi
MGP_CAROLIEiJ_G0020356Tarbp29192.453ENSNBRG00000003967TARBP27665.035Neolamprologus_brichardi
MGP_CAROLIEiJ_G0020356Tarbp298100.000ENSNLEG00000017690TARBP29998.718Nomascus_leucogenys
MGP_CAROLIEiJ_G0020356Tarbp29198.113ENSMEUG00000001916TARBP210080.822Notamacropus_eugenii
MGP_CAROLIEiJ_G0020356Tarbp28292.444ENSOPRG00000011397TARBP210092.444Ochotona_princeps
MGP_CAROLIEiJ_G0020356Tarbp210094.690ENSODEG00000013413TARBP210092.920Octodon_degus
MGP_CAROLIEiJ_G0020356Tarbp29192.453ENSONIG00000005115tarbp29766.572Oreochromis_niloticus
MGP_CAROLIEiJ_G0020356Tarbp29498.649ENSOCUG00000005700TARBP210090.984Oryctolagus_cuniculus
MGP_CAROLIEiJ_G0020356Tarbp29192.453ENSORLG00000005209tarbp210065.753Oryzias_latipes
MGP_CAROLIEiJ_G0020356Tarbp29192.453ENSORLG00020017755tarbp210064.658Oryzias_latipes_hni
MGP_CAROLIEiJ_G0020356Tarbp29192.453ENSORLG00015013237tarbp210064.932Oryzias_latipes_hsok
MGP_CAROLIEiJ_G0020356Tarbp29192.453ENSOMEG00000018860tarbp210065.205Oryzias_melastigma
MGP_CAROLIEiJ_G0020356Tarbp210093.852ENSOGAG00000001744TARBP210093.716Otolemur_garnettii
MGP_CAROLIEiJ_G0020356Tarbp210092.350ENSOARG00000016437TARBP210092.896Ovis_aries
MGP_CAROLIEiJ_G0020356Tarbp298100.000ENSPPAG00000030429TARBP29998.718Pan_paniscus
MGP_CAROLIEiJ_G0020356Tarbp210094.690ENSPPRG00000000189TARBP210093.169Panthera_pardus
MGP_CAROLIEiJ_G0020356Tarbp29498.649ENSPTIG00000007859TARBP210088.493Panthera_tigris_altaica
MGP_CAROLIEiJ_G0020356Tarbp298100.000ENSPTRG00000005020TARBP29998.718Pan_troglodytes
MGP_CAROLIEiJ_G0020356Tarbp298100.000ENSPANG00000010689TARBP29997.436Papio_anubis
MGP_CAROLIEiJ_G0020356Tarbp29194.340ENSPKIG00000002455tarbp210067.213Paramormyrops_kingsleyae
MGP_CAROLIEiJ_G0020356Tarbp29192.453ENSPMGG00000006497tarbp29964.917Periophthalmus_magnuspinnatus
MGP_CAROLIEiJ_G0020356Tarbp210095.616ENSPEMG00000014285Tarbp210095.616Peromyscus_maniculatus_bairdii
MGP_CAROLIEiJ_G0020356Tarbp28888.235ENSPMAG00000000105tarbp210056.522Petromyzon_marinus
MGP_CAROLIEiJ_G0020356Tarbp29198.113ENSPCIG00000006672TARBP29281.096Phascolarctos_cinereus
MGP_CAROLIEiJ_G0020356Tarbp29192.453ENSPFOG00000007586tarbp210065.753Poecilia_formosa
MGP_CAROLIEiJ_G0020356Tarbp29192.453ENSPLAG00000017659tarbp210065.479Poecilia_latipinna
MGP_CAROLIEiJ_G0020356Tarbp29192.453ENSPMEG00000007775tarbp210065.753Poecilia_mexicana
MGP_CAROLIEiJ_G0020356Tarbp29192.453ENSPREG00000007815tarbp210065.479Poecilia_reticulata
MGP_CAROLIEiJ_G0020356Tarbp29497.297ENSPPYG00000004583TARBP210085.014Pongo_abelii
MGP_CAROLIEiJ_G0020356Tarbp29093.522ENSPCAG00000005352TARBP210077.596Procavia_capensis
MGP_CAROLIEiJ_G0020356Tarbp298100.000ENSPCOG00000013102TARBP29998.718Propithecus_coquereli
MGP_CAROLIEiJ_G0020356Tarbp29498.649ENSPVAG00000012286TARBP210089.344Pteropus_vampyrus
MGP_CAROLIEiJ_G0020356Tarbp29192.453ENSPNYG00000014125tarbp210064.384Pundamilia_nyererei
MGP_CAROLIEiJ_G0020356Tarbp29194.340ENSPNAG00000011128tarbp210063.684Pygocentrus_nattereri
MGP_CAROLIEiJ_G0020356Tarbp210098.354ENSRNOG00000042355Tarbp210097.260Rattus_norvegicus
MGP_CAROLIEiJ_G0020356Tarbp298100.000ENSRBIG00000027150TARBP29997.436Rhinopithecus_bieti
MGP_CAROLIEiJ_G0020356Tarbp298100.000ENSRROG00000044783TARBP29997.436Rhinopithecus_roxellana
MGP_CAROLIEiJ_G0020356Tarbp298100.000ENSSBOG00000027305TARBP29998.718Saimiri_boliviensis_boliviensis
MGP_CAROLIEiJ_G0020356Tarbp28178.723ENSSBOG00000034049-8575.824Saimiri_boliviensis_boliviensis
MGP_CAROLIEiJ_G0020356Tarbp29198.113ENSSHAG00000007064TARBP210081.267Sarcophilus_harrisii
MGP_CAROLIEiJ_G0020356Tarbp29192.453ENSSFOG00015010784tarbp210066.120Scleropages_formosus
MGP_CAROLIEiJ_G0020356Tarbp29192.453ENSSMAG00000012769tarbp210065.479Scophthalmus_maximus
MGP_CAROLIEiJ_G0020356Tarbp29192.453ENSSDUG00000018818tarbp210064.658Seriola_dumerili
MGP_CAROLIEiJ_G0020356Tarbp29192.453ENSSLDG00000001835tarbp210064.658Seriola_lalandi_dorsalis
MGP_CAROLIEiJ_G0020356Tarbp27387.931ENSSARG00000001010TARBP27384.577Sorex_araneus
MGP_CAROLIEiJ_G0020356Tarbp29196.226ENSSPUG00000005895TARBP210051.743Sphenodon_punctatus
MGP_CAROLIEiJ_G0020356Tarbp29192.453ENSSPAG00000022797tarbp210064.932Stegastes_partitus
MGP_CAROLIEiJ_G0020356Tarbp210094.262ENSSSCG00000000276TARBP210093.716Sus_scrofa
MGP_CAROLIEiJ_G0020356Tarbp29190.566ENSTRUG00000014379tarbp210064.658Takifugu_rubripes
MGP_CAROLIEiJ_G0020356Tarbp29190.566ENSTNIG00000007065tarbp210064.384Tetraodon_nigroviridis
MGP_CAROLIEiJ_G0020356Tarbp26397.110ENSTBEG00000012751-5597.110Tupaia_belangeri
MGP_CAROLIEiJ_G0020356Tarbp210093.716ENSTTRG00000017177TARBP210093.443Tursiops_truncatus
MGP_CAROLIEiJ_G0020356Tarbp210094.690ENSUAMG00000009011TARBP210092.623Ursus_americanus
MGP_CAROLIEiJ_G0020356Tarbp210094.690ENSUMAG00000010461TARBP210092.077Ursus_maritimus
MGP_CAROLIEiJ_G0020356Tarbp210095.133ENSVVUG00000028150TARBP210093.716Vulpes_vulpes
MGP_CAROLIEiJ_G0020356Tarbp29188.679ENSXETG00000012644tarbp29768.715Xenopus_tropicalis
MGP_CAROLIEiJ_G0020356Tarbp29192.453ENSXMAG00000017836tarbp210066.027Xiphophorus_maculatus

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