EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: MGP_CAROLIEiJ_G0020379 (Gene tree)
Gene ID: 110310786
Gene Symbol: Gtsf1
Alias: 1700006H03Rik|Cue110
Full Name: gametocyte specific factor 1
Gene Type: protein_coding
Species: Mus_caroli
Status: putative
Strand: Minus strand
Length: 19162 bases
Position: chr15:97247862-97267023
Accession: 110310786
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CAROLIEiJ_P0040092	zf-U11-48K	PF05253.12	3.7e-20	1	2
MGP_CAROLIEiJ_P0040092	zf-U11-48K	PF05253.12	3.7e-20	2	2
MGP_CAROLIEiJ_P0040091	zf-U11-48K	PF05253.12	7e-20	1	2
MGP_CAROLIEiJ_P0040091	zf-U11-48K	PF05253.12	7e-20	2	2
MGP_CAROLIEiJ_P0040084	zf-U11-48K	PF05253.12	7.9e-20	1	2
MGP_CAROLIEiJ_P0040084	zf-U11-48K	PF05253.12	7.9e-20	2	2
MGP_CAROLIEiJ_P0040086	zf-U11-48K	PF05253.12	7.9e-20	1	2
MGP_CAROLIEiJ_P0040086	zf-U11-48K	PF05253.12	7.9e-20	2	2
MGP_CAROLIEiJ_P0040088	zf-U11-48K	PF05253.12	7.9e-20	1	2
MGP_CAROLIEiJ_P0040088	zf-U11-48K	PF05253.12	7.9e-20	2	2
MGP_CAROLIEiJ_P0040089	zf-U11-48K	PF05253.12	7.9e-20	1	2
MGP_CAROLIEiJ_P0040089	zf-U11-48K	PF05253.12	7.9e-20	2	2
MGP_CAROLIEiJ_P0040090	zf-U11-48K	PF05253.12	7.9e-20	1	2
MGP_CAROLIEiJ_P0040090	zf-U11-48K	PF05253.12	7.9e-20	2	2
MGP_CAROLIEiJ_P0040085	zf-U11-48K	PF05253.12	1.1e-19	1	2
MGP_CAROLIEiJ_P0040085	zf-U11-48K	PF05253.12	1.1e-19	2	2
MGP_CAROLIEiJ_P0040087	zf-U11-48K	PF05253.12	1.2e-19	1	2
MGP_CAROLIEiJ_P0040087	zf-U11-48K	PF05253.12	1.2e-19	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CAROLIEiJ_T0040088	-	799	-	MGP_CAROLIEiJ_P0040088	167 (aa)	XP_021039555	UPI00000280D5
MGP_CAROLIEiJ_T0040089	-	756	-	MGP_CAROLIEiJ_P0040089	167 (aa)	XP_021039555	UPI00000280D5
MGP_CAROLIEiJ_T0040086	-	767	-	MGP_CAROLIEiJ_P0040086	167 (aa)	XP_021039555	UPI00000280D5
MGP_CAROLIEiJ_T0040087	-	698	-	MGP_CAROLIEiJ_P0040087	193 (aa)	-	UPI00001E9FE0
MGP_CAROLIEiJ_T0040084	-	852	-	MGP_CAROLIEiJ_P0040084	167 (aa)	XP_021039555	UPI00000280D5
MGP_CAROLIEiJ_T0040085	-	747	-	MGP_CAROLIEiJ_P0040085	186 (aa)	-	-
MGP_CAROLIEiJ_T0040091	-	704	-	MGP_CAROLIEiJ_P0040091	161 (aa)	-	UPI000198D061
MGP_CAROLIEiJ_T0040090	-	735	-	MGP_CAROLIEiJ_P0040090	167 (aa)	XP_021039555	UPI00000280D5
MGP_CAROLIEiJ_T0040092	-	615	-	MGP_CAROLIEiJ_P0040092	127 (aa)	-	UPI000198D062

Gene Model

Click here to download MGP_CAROLIEiJ_G0020379's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CAROLIEiJ_G0020379's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CAROLIEiJ_G0020379	Gtsf1	91	32.759	MGP_CAROLIEiJ_G0024611	Gtsf1l	69	32.759

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_CAROLIEiJ_G0020379	Gtsf1	99	92.857	ENSG00000170627	GTSF1	100	91.617	Homo_sapiens
MGP_CAROLIEiJ_G0020379	Gtsf1	92	52.137	ENSAPOG00000022724	-	95	46.000	Acanthochromis_polyacanthus
MGP_CAROLIEiJ_G0020379	Gtsf1	97	97.531	ENSAMEG00000000939	GTSF1	96	97.531	Ailuropoda_melanoleuca
MGP_CAROLIEiJ_G0020379	Gtsf1	92	50.427	ENSAOCG00000022214	-	74	42.236	Amphiprion_ocellaris
MGP_CAROLIEiJ_G0020379	Gtsf1	94	61.667	ENSAPLG00000004814	GTSF1	93	60.317	Anas_platyrhynchos
MGP_CAROLIEiJ_G0020379	Gtsf1	97	66.667	ENSACAG00000014260	-	96	60.606	Anolis_carolinensis
MGP_CAROLIEiJ_G0020379	Gtsf1	91	49.138	ENSACAG00000029590	-	95	49.138	Anolis_carolinensis
MGP_CAROLIEiJ_G0020379	Gtsf1	100	92.216	ENSANAG00000024529	GTSF1	100	92.216	Aotus_nancymaae
MGP_CAROLIEiJ_G0020379	Gtsf1	100	95.210	ENSBTAG00000018085	GTSF1	100	95.210	Bos_taurus
MGP_CAROLIEiJ_G0020379	Gtsf1	100	87.425	ENSCJAG00000039915	-	99	81.818	Callithrix_jacchus
MGP_CAROLIEiJ_G0020379	Gtsf1	100	92.814	ENSCJAG00000018968	-	100	92.814	Callithrix_jacchus
MGP_CAROLIEiJ_G0020379	Gtsf1	100	97.638	ENSCAFG00000006465	-	100	97.006	Canis_familiaris
MGP_CAROLIEiJ_G0020379	Gtsf1	100	97.638	ENSCAFG00020020373	-	94	96.341	Canis_lupus_dingo
MGP_CAROLIEiJ_G0020379	Gtsf1	98	94.479	ENSCHIG00000012215	-	95	94.479	Capra_hircus
MGP_CAROLIEiJ_G0020379	Gtsf1	100	75.155	ENSTSYG00000035266	-	100	74.850	Carlito_syrichta
MGP_CAROLIEiJ_G0020379	Gtsf1	100	94.488	ENSTSYG00000004679	-	100	93.373	Carlito_syrichta
MGP_CAROLIEiJ_G0020379	Gtsf1	100	99.213	ENSCPOG00000008743	GTSF1	100	98.204	Cavia_porcellus
MGP_CAROLIEiJ_G0020379	Gtsf1	96	69.032	ENSCCAG00000032808	GTSF1	100	68.944	Cebus_capucinus
MGP_CAROLIEiJ_G0020379	Gtsf1	99	92.857	ENSCATG00000036328	GTSF1	100	91.617	Cercocebus_atys
MGP_CAROLIEiJ_G0020379	Gtsf1	100	98.425	ENSCLAG00000012811	GTSF1	100	97.605	Chinchilla_lanigera
MGP_CAROLIEiJ_G0020379	Gtsf1	96	92.258	ENSCSAG00000005394	GTSF1	99	91.720	Chlorocebus_sabaeus
MGP_CAROLIEiJ_G0020379	Gtsf1	100	96.063	ENSCHOG00000001659	GTSF1	100	95.210	Choloepus_hoffmanni
MGP_CAROLIEiJ_G0020379	Gtsf1	95	61.039	ENSCPBG00000024905	-	86	60.625	Chrysemys_picta_bellii
MGP_CAROLIEiJ_G0020379	Gtsf1	97	75.806	ENSCPBG00000005134	-	79	66.129	Chrysemys_picta_bellii
MGP_CAROLIEiJ_G0020379	Gtsf1	100	86.228	ENSCANG00000031776	-	100	86.228	Colobus_angolensis_palliatus
MGP_CAROLIEiJ_G0020379	Gtsf1	100	90.419	ENSCANG00000033118	GTSF1	100	90.419	Colobus_angolensis_palliatus
MGP_CAROLIEiJ_G0020379	Gtsf1	100	99.401	ENSCGRG00001013814	Gtsf1	100	99.401	Cricetulus_griseus_chok1gshd
MGP_CAROLIEiJ_G0020379	Gtsf1	100	99.401	ENSCGRG00000007733	Gtsf1	100	99.401	Cricetulus_griseus_crigri
MGP_CAROLIEiJ_G0020379	Gtsf1	96	95.902	ENSDNOG00000001438	-	90	94.904	Dasypus_novemcinctus
MGP_CAROLIEiJ_G0020379	Gtsf1	100	98.425	ENSDORG00000003228	Gtsf1	100	98.204	Dipodomys_ordii
MGP_CAROLIEiJ_G0020379	Gtsf1	100	96.063	ENSETEG00000009310	GTSF1	100	93.413	Echinops_telfairi
MGP_CAROLIEiJ_G0020379	Gtsf1	100	96.407	ENSEASG00005010260	GTSF1	99	89.730	Equus_asinus_asinus
MGP_CAROLIEiJ_G0020379	Gtsf1	100	96.407	ENSECAG00000013618	GTSF1	100	96.407	Equus_caballus
MGP_CAROLIEiJ_G0020379	Gtsf1	100	97.006	ENSEEUG00000005185	GTSF1	100	97.006	Erinaceus_europaeus
MGP_CAROLIEiJ_G0020379	Gtsf1	100	97.638	ENSFCAG00000010156	-	100	97.006	Felis_catus
MGP_CAROLIEiJ_G0020379	Gtsf1	100	67.665	ENSFCAG00000023672	-	99	64.324	Felis_catus
MGP_CAROLIEiJ_G0020379	Gtsf1	94	53.719	ENSFALG00000007613	-	100	53.175	Ficedula_albicollis
MGP_CAROLIEiJ_G0020379	Gtsf1	100	94.488	ENSFDAG00000009383	GTSF1	100	93.413	Fukomys_damarensis
MGP_CAROLIEiJ_G0020379	Gtsf1	89	64.035	ENSGALG00000001109	GTSF1	95	55.195	Gallus_gallus
MGP_CAROLIEiJ_G0020379	Gtsf1	92	55.556	ENSGACG00000010783	-	80	50.340	Gasterosteus_aculeatus
MGP_CAROLIEiJ_G0020379	Gtsf1	82	51.887	ENSGAGG00000016342	-	99	51.887	Gopherus_agassizii
MGP_CAROLIEiJ_G0020379	Gtsf1	100	62.963	ENSGAGG00000011062	GTSF1	86	61.677	Gopherus_agassizii
MGP_CAROLIEiJ_G0020379	Gtsf1	87	45.045	ENSGAGG00000018216	-	89	45.045	Gopherus_agassizii
MGP_CAROLIEiJ_G0020379	Gtsf1	51	64.615	ENSGAGG00000024765	-	60	64.615	Gopherus_agassizii
MGP_CAROLIEiJ_G0020379	Gtsf1	99	92.857	ENSGGOG00000016063	GTSF1	100	91.617	Gorilla_gorilla
MGP_CAROLIEiJ_G0020379	Gtsf1	100	96.850	ENSHGLG00000002436	GTSF1	100	95.808	Heterocephalus_glaber_female
MGP_CAROLIEiJ_G0020379	Gtsf1	100	96.850	ENSHGLG00100017301	GTSF1	100	95.808	Heterocephalus_glaber_male
MGP_CAROLIEiJ_G0020379	Gtsf1	94	52.893	ENSIPUG00000002483	-	88	45.251	Ictalurus_punctatus
MGP_CAROLIEiJ_G0020379	Gtsf1	100	99.213	ENSSTOG00000025170	GTSF1	100	98.802	Ictidomys_tridecemlineatus
MGP_CAROLIEiJ_G0020379	Gtsf1	100	87.578	ENSJJAG00000017442	-	100	86.826	Jaculus_jaculus
MGP_CAROLIEiJ_G0020379	Gtsf1	99	95.238	ENSJJAG00000003323	-	100	92.814	Jaculus_jaculus
MGP_CAROLIEiJ_G0020379	Gtsf1	92	53.846	ENSKMAG00000006038	-	80	48.980	Kryptolebias_marmoratus
MGP_CAROLIEiJ_G0020379	Gtsf1	94	63.333	ENSLACG00000008870	GTSF1	98	54.450	Latimeria_chalumnae
MGP_CAROLIEiJ_G0020379	Gtsf1	97	97.531	ENSLAFG00000016318	GTSF1	97	97.531	Loxodonta_africana
MGP_CAROLIEiJ_G0020379	Gtsf1	99	92.857	ENSMFAG00000041178	GTSF1	100	91.617	Macaca_fascicularis
MGP_CAROLIEiJ_G0020379	Gtsf1	99	92.857	ENSMMUG00000003758	GTSF1	100	91.617	Macaca_mulatta
MGP_CAROLIEiJ_G0020379	Gtsf1	99	92.857	ENSMNEG00000036779	GTSF1	100	91.617	Macaca_nemestrina
MGP_CAROLIEiJ_G0020379	Gtsf1	99	92.063	ENSMLEG00000028375	GTSF1	100	91.018	Mandrillus_leucophaeus
MGP_CAROLIEiJ_G0020379	Gtsf1	91	61.538	ENSMGAG00000000685	GTSF1	83	61.538	Meleagris_gallopavo
MGP_CAROLIEiJ_G0020379	Gtsf1	100	74.850	ENSMAUG00000018746	Gtsf1	100	73.964	Mesocricetus_auratus
MGP_CAROLIEiJ_G0020379	Gtsf1	100	97.006	ENSMICG00000008444	-	100	97.006	Microcebus_murinus
MGP_CAROLIEiJ_G0020379	Gtsf1	100	99.213	ENSMOCG00000018889	Gtsf1	100	98.802	Microtus_ochrogaster
MGP_CAROLIEiJ_G0020379	Gtsf1	100	88.199	ENSMODG00000019422	GTSF1	100	88.024	Monodelphis_domestica
MGP_CAROLIEiJ_G0020379	Gtsf1	100	100.000	ENSMUSG00000022487	Gtsf1	100	100.000	Mus_musculus
MGP_CAROLIEiJ_G0020379	Gtsf1	100	99.401	MGP_PahariEiJ_G0020378	Gtsf1	100	99.401	Mus_pahari
MGP_CAROLIEiJ_G0020379	Gtsf1	100	100.000	MGP_SPRETEiJ_G0021272	Gtsf1	100	100.000	Mus_spretus
MGP_CAROLIEiJ_G0020379	Gtsf1	100	88.189	ENSMPUG00000019140	-	100	88.024	Mustela_putorius_furo
MGP_CAROLIEiJ_G0020379	Gtsf1	98	98.387	ENSMPUG00000005669	-	98	97.561	Mustela_putorius_furo
MGP_CAROLIEiJ_G0020379	Gtsf1	100	96.063	ENSMPUG00000019323	-	100	95.808	Mustela_putorius_furo
MGP_CAROLIEiJ_G0020379	Gtsf1	100	95.276	ENSMLUG00000012961	-	100	95.210	Myotis_lucifugus
MGP_CAROLIEiJ_G0020379	Gtsf1	100	92.216	ENSMLUG00000026557	-	100	92.216	Myotis_lucifugus
MGP_CAROLIEiJ_G0020379	Gtsf1	100	98.802	ENSNGAG00000014213	Gtsf1	100	98.802	Nannospalax_galili
MGP_CAROLIEiJ_G0020379	Gtsf1	99	92.063	ENSNLEG00000017635	GTSF1	100	91.018	Nomascus_leucogenys
MGP_CAROLIEiJ_G0020379	Gtsf1	100	78.261	ENSMEUG00000016206	GTSF1	100	77.844	Notamacropus_eugenii
MGP_CAROLIEiJ_G0020379	Gtsf1	100	68.862	ENSOPRG00000017277	GTSF1	100	68.862	Ochotona_princeps
MGP_CAROLIEiJ_G0020379	Gtsf1	100	97.638	ENSODEG00000014220	GTSF1	100	97.006	Octodon_degus
MGP_CAROLIEiJ_G0020379	Gtsf1	97	73.387	ENSOANG00000011386	GTSF1	99	68.675	Ornithorhynchus_anatinus
MGP_CAROLIEiJ_G0020379	Gtsf1	100	96.894	ENSOCUG00000024495	GTSF1	100	96.407	Oryctolagus_cuniculus
MGP_CAROLIEiJ_G0020379	Gtsf1	100	44.961	ENSORLG00015005017	-	71	50.877	Oryzias_latipes_hsok
MGP_CAROLIEiJ_G0020379	Gtsf1	96	96.774	ENSOGAG00000017227	GTSF1	94	94.969	Otolemur_garnettii
MGP_CAROLIEiJ_G0020379	Gtsf1	100	95.808	ENSOARG00000016162	GTSF1	100	95.808	Ovis_aries
MGP_CAROLIEiJ_G0020379	Gtsf1	99	92.857	ENSPPAG00000028506	GTSF1	100	91.617	Pan_paniscus
MGP_CAROLIEiJ_G0020379	Gtsf1	100	97.006	ENSPPRG00000004344	-	100	97.006	Panthera_pardus
MGP_CAROLIEiJ_G0020379	Gtsf1	100	86.826	ENSPPRG00000017612	-	99	81.967	Panthera_pardus
MGP_CAROLIEiJ_G0020379	Gtsf1	100	87.425	ENSPTIG00000010868	-	99	82.514	Panthera_tigris_altaica
MGP_CAROLIEiJ_G0020379	Gtsf1	100	97.006	ENSPTIG00000020415	-	100	97.006	Panthera_tigris_altaica
MGP_CAROLIEiJ_G0020379	Gtsf1	99	92.857	ENSPTRG00000005041	GTSF1	100	91.617	Pan_troglodytes
MGP_CAROLIEiJ_G0020379	Gtsf1	99	92.857	ENSPANG00000020579	GTSF1	100	91.617	Papio_anubis
MGP_CAROLIEiJ_G0020379	Gtsf1	97	74.194	ENSPSIG00000009968	GTSF1	90	63.934	Pelodiscus_sinensis
MGP_CAROLIEiJ_G0020379	Gtsf1	91	49.573	ENSPSIG00000009839	-	93	44.966	Pelodiscus_sinensis
MGP_CAROLIEiJ_G0020379	Gtsf1	100	99.401	ENSPEMG00000009595	Gtsf1	100	99.401	Peromyscus_maniculatus_bairdii
MGP_CAROLIEiJ_G0020379	Gtsf1	100	83.234	ENSPCIG00000006731	GTSF1	100	83.234	Phascolarctos_cinereus
MGP_CAROLIEiJ_G0020379	Gtsf1	99	92.857	ENSPPYG00000004605	GTSF1	100	91.617	Pongo_abelii
MGP_CAROLIEiJ_G0020379	Gtsf1	97	84.615	ENSPCOG00000015201	-	99	81.481	Propithecus_coquereli
MGP_CAROLIEiJ_G0020379	Gtsf1	100	96.850	ENSPCOG00000016907	-	100	96.407	Propithecus_coquereli
MGP_CAROLIEiJ_G0020379	Gtsf1	100	97.638	ENSPVAG00000000333	GTSF1	100	97.006	Pteropus_vampyrus
MGP_CAROLIEiJ_G0020379	Gtsf1	94	54.545	ENSPNAG00000005737	-	89	45.198	Pygocentrus_nattereri
MGP_CAROLIEiJ_G0020379	Gtsf1	100	100.000	ENSRNOG00000036831	Gtsf1	94	100.000	Rattus_norvegicus
MGP_CAROLIEiJ_G0020379	Gtsf1	100	83.234	ENSRBIG00000039916	-	94	80.791	Rhinopithecus_bieti
MGP_CAROLIEiJ_G0020379	Gtsf1	99	92.063	ENSRBIG00000043438	-	100	91.018	Rhinopithecus_bieti
MGP_CAROLIEiJ_G0020379	Gtsf1	99	92.857	ENSRROG00000008137	GTSF1	100	91.617	Rhinopithecus_roxellana
MGP_CAROLIEiJ_G0020379	Gtsf1	100	93.413	ENSSBOG00000029460	GTSF1	100	93.413	Saimiri_boliviensis_boliviensis
MGP_CAROLIEiJ_G0020379	Gtsf1	100	88.199	ENSSHAG00000011633	GTSF1	100	88.024	Sarcophilus_harrisii
MGP_CAROLIEiJ_G0020379	Gtsf1	100	96.850	ENSSARG00000004928	GTSF1	78	96.923	Sorex_araneus
MGP_CAROLIEiJ_G0020379	Gtsf1	86	70.909	ENSSPUG00000010064	GTSF1	93	70.909	Sphenodon_punctatus
MGP_CAROLIEiJ_G0020379	Gtsf1	100	96.407	ENSSSCG00000026333	GTSF1	100	96.407	Sus_scrofa
MGP_CAROLIEiJ_G0020379	Gtsf1	94	56.198	ENSTGUG00000002008	-	100	55.469	Taeniopygia_guttata
MGP_CAROLIEiJ_G0020379	Gtsf1	96	95.031	ENSTBEG00000006154	GTSF1	100	95.031	Tupaia_belangeri
MGP_CAROLIEiJ_G0020379	Gtsf1	100	94.012	ENSTTRG00000004470	GTSF1	100	94.012	Tursiops_truncatus
MGP_CAROLIEiJ_G0020379	Gtsf1	100	97.638	ENSUAMG00000021669	GTSF1	94	96.951	Ursus_americanus
MGP_CAROLIEiJ_G0020379	Gtsf1	100	97.638	ENSUMAG00000011279	GTSF1	100	97.605	Ursus_maritimus
MGP_CAROLIEiJ_G0020379	Gtsf1	100	95.276	ENSVPAG00000007016	GTSF1	100	95.210	Vicugna_pacos
MGP_CAROLIEiJ_G0020379	Gtsf1	100	97.638	ENSVVUG00000023687	-	95	89.894	Vulpes_vulpes
MGP_CAROLIEiJ_G0020379	Gtsf1	99	68.254	ENSXETG00000033546	gtsf1	78	60.452	Xenopus_tropicalis