EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: MGP_CAROLIEiJ_G0020380 (Gene tree)
Gene ID: 110310856
Gene Symbol: Gtsf2
Alias: BC048502
Full Name: gametocyte-specific factor 1-like
Gene Type: protein_coding
Species: Mus_caroli
Status: putative
Strand: Minus strand
Length: 9294 bases
Position: chr15:97278755-97288048
Accession: 110310856
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CAROLIEiJ_P0040093	zf-U11-48K	PF05253.12	2.9e-17	1	2
MGP_CAROLIEiJ_P0040093	zf-U11-48K	PF05253.12	2.9e-17	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CAROLIEiJ_T0040093	-	718	XM_021183974	MGP_CAROLIEiJ_P0040093	154 (aa)	XP_021039633	UPI000A316982

Gene Model

Click here to download MGP_CAROLIEiJ_G0020380's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CAROLIEiJ_G0020380's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CAROLIEiJ_G0020380	Gtsf2	86	57.895	MGP_CAROLIEiJ_G0024611	Gtsf1l	87	57.895

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_CAROLIEiJ_G0020380	Gtsf2	99	73.856	ENSAMEG00000000958	-	100	73.856	Ailuropoda_melanoleuca
MGP_CAROLIEiJ_G0020380	Gtsf2	100	70.968	ENSCAFG00000006463	-	100	70.968	Canis_familiaris
MGP_CAROLIEiJ_G0020380	Gtsf2	99	70.588	ENSCAFG00020020371	-	97	70.588	Canis_lupus_dingo
MGP_CAROLIEiJ_G0020380	Gtsf2	100	65.806	ENSCPOG00000023851	-	100	65.806	Cavia_porcellus
MGP_CAROLIEiJ_G0020380	Gtsf2	95	64.626	ENSCLAG00000008579	-	100	64.626	Chinchilla_lanigera
MGP_CAROLIEiJ_G0020380	Gtsf2	100	83.117	ENSCGRG00001016136	Gtsf2	100	83.117	Cricetulus_griseus_chok1gshd
MGP_CAROLIEiJ_G0020380	Gtsf2	100	83.117	ENSCGRG00000012950	Gtsf2	100	83.117	Cricetulus_griseus_crigri
MGP_CAROLIEiJ_G0020380	Gtsf2	100	72.727	ENSDORG00000026087	Gtsf2	100	72.727	Dipodomys_ordii
MGP_CAROLIEiJ_G0020380	Gtsf2	68	66.981	ENSEASG00005010262	-	97	66.981	Equus_asinus_asinus
MGP_CAROLIEiJ_G0020380	Gtsf2	68	70.476	ENSECAG00000014413	-	97	70.476	Equus_caballus
MGP_CAROLIEiJ_G0020380	Gtsf2	69	73.585	ENSFCAG00000031316	-	93	71.560	Felis_catus
MGP_CAROLIEiJ_G0020380	Gtsf2	100	64.935	ENSFDAG00000019555	-	100	64.935	Fukomys_damarensis
MGP_CAROLIEiJ_G0020380	Gtsf2	92	70.629	ENSHGLG00000002798	-	95	70.068	Heterocephalus_glaber_female
MGP_CAROLIEiJ_G0020380	Gtsf2	92	70.629	ENSHGLG00100012359	-	95	70.068	Heterocephalus_glaber_male
MGP_CAROLIEiJ_G0020380	Gtsf2	97	67.333	ENSSTOG00000030158	-	100	67.333	Ictidomys_tridecemlineatus
MGP_CAROLIEiJ_G0020380	Gtsf2	100	76.623	ENSJJAG00000016320	Gtsf2	100	76.623	Jaculus_jaculus
MGP_CAROLIEiJ_G0020380	Gtsf2	99	84.868	ENSMAUG00000017189	-	94	84.868	Mesocricetus_auratus
MGP_CAROLIEiJ_G0020380	Gtsf2	52	87.500	ENSMAUG00000014687	-	89	86.420	Mesocricetus_auratus
MGP_CAROLIEiJ_G0020380	Gtsf2	100	85.065	ENSMOCG00000014770	Gtsf2	100	85.065	Microtus_ochrogaster
MGP_CAROLIEiJ_G0020380	Gtsf2	100	99.351	ENSMUSG00000053508	Gtsf2	100	99.351	Mus_musculus
MGP_CAROLIEiJ_G0020380	Gtsf2	100	96.104	MGP_PahariEiJ_G0020379	Gtsf2	100	96.104	Mus_pahari
MGP_CAROLIEiJ_G0020380	Gtsf2	100	99.351	MGP_SPRETEiJ_G0021273	Gtsf2	100	99.351	Mus_spretus
MGP_CAROLIEiJ_G0020380	Gtsf2	100	74.194	ENSMPUG00000005664	-	100	74.194	Mustela_putorius_furo
MGP_CAROLIEiJ_G0020380	Gtsf2	100	75.974	ENSNGAG00000008752	Gtsf2	100	75.974	Nannospalax_galili
MGP_CAROLIEiJ_G0020380	Gtsf2	87	65.672	ENSODEG00000013228	-	98	63.265	Octodon_degus
MGP_CAROLIEiJ_G0020380	Gtsf2	82	73.228	ENSPPRG00000004157	-	99	73.228	Panthera_pardus
MGP_CAROLIEiJ_G0020380	Gtsf2	82	73.228	ENSPTIG00000020670	-	99	73.228	Panthera_tigris_altaica
MGP_CAROLIEiJ_G0020380	Gtsf2	100	81.818	ENSPEMG00000014641	-	100	81.818	Peromyscus_maniculatus_bairdii
MGP_CAROLIEiJ_G0020380	Gtsf2	100	88.312	ENSPEMG00000010828	-	100	88.312	Peromyscus_maniculatus_bairdii
MGP_CAROLIEiJ_G0020380	Gtsf2	100	92.857	ENSRNOG00000036830	RGD1563200	100	92.857	Rattus_norvegicus
MGP_CAROLIEiJ_G0020380	Gtsf2	98	61.184	ENSSSCG00000000296	-	92	61.184	Sus_scrofa
MGP_CAROLIEiJ_G0020380	Gtsf2	68	76.190	ENSUAMG00000021668	-	96	76.190	Ursus_americanus
MGP_CAROLIEiJ_G0020380	Gtsf2	68	76.190	ENSUMAG00000011281	-	96	76.190	Ursus_maritimus
MGP_CAROLIEiJ_G0020380	Gtsf2	68	73.333	ENSVVUG00000023684	-	96	73.333	Vulpes_vulpes