EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: MGP_CAROLIEiJ_G0020389 (Gene tree)
Gene ID: 110311716
Gene Symbol: Zfp597
Alias: 4933407K12Rik
Full Name: zinc finger protein 597
Gene Type: protein_coding
Species: Mus_caroli
Status: putative
Strand: Minus strand
Length: 27589 bases
Position: chr16:131310-158898
Accession: 110311716
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CAROLIEiJ_P0040110	zf-C2H2	PF00096.26	2.6e-28	1	5
MGP_CAROLIEiJ_P0040110	zf-C2H2	PF00096.26	2.6e-28	2	5
MGP_CAROLIEiJ_P0040110	zf-C2H2	PF00096.26	2.6e-28	3	5
MGP_CAROLIEiJ_P0040110	zf-C2H2	PF00096.26	2.6e-28	4	5
MGP_CAROLIEiJ_P0040110	zf-C2H2	PF00096.26	2.6e-28	5	5
MGP_CAROLIEiJ_P0040110	zf-met	PF12874.7	0.00029	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CAROLIEiJ_T0040110	-	6311	-	MGP_CAROLIEiJ_P0040110	419 (aa)	XP_021040863	UPI000A315184
MGP_CAROLIEiJ_T0040111	-	1503	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0040112	-	1804	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0040113	-	696	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0040109	-	398	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_CAROLIEiJ_G0020389's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CAROLIEiJ_G0020389's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CAROLIEiJ_G0020389	Zfp597	95	40.964	MGP_CAROLIEiJ_G0031203	Zfp882	99	40.964
MGP_CAROLIEiJ_G0020389	Zfp597	62	39.744	MGP_CAROLIEiJ_G0029144	-	69	30.918
MGP_CAROLIEiJ_G0020389	Zfp597	63	39.744	MGP_CAROLIEiJ_G0029143	-	80	30.918
MGP_CAROLIEiJ_G0020389	Zfp597	99	36.301	MGP_CAROLIEiJ_G0029427	-	99	36.301
MGP_CAROLIEiJ_G0020389	Zfp597	63	38.889	MGP_CAROLIEiJ_G0029135	Zfp628	59	37.500
MGP_CAROLIEiJ_G0020389	Zfp597	66	43.158	MGP_CAROLIEiJ_G0028463	Prdm5	71	43.158
MGP_CAROLIEiJ_G0020389	Zfp597	65	44.697	MGP_CAROLIEiJ_G0029321	Zfp112	68	44.697
MGP_CAROLIEiJ_G0020389	Zfp597	64	37.681	MGP_CAROLIEiJ_G0029324	Zfp111	75	37.681
MGP_CAROLIEiJ_G0020389	Zfp597	96	43.750	MGP_CAROLIEiJ_G0018683	Zfp493	99	43.750
MGP_CAROLIEiJ_G0020389	Zfp597	96	33.333	MGP_CAROLIEiJ_G0015655	-	93	33.333
MGP_CAROLIEiJ_G0020389	Zfp597	96	46.739	MGP_CAROLIEiJ_G0031579	Zfp1	99	46.739
MGP_CAROLIEiJ_G0020389	Zfp597	68	31.349	MGP_CAROLIEiJ_G0028343	Repin1	86	31.466
MGP_CAROLIEiJ_G0020389	Zfp597	63	43.333	MGP_CAROLIEiJ_G0018274	Zkscan4	53	43.333
MGP_CAROLIEiJ_G0020389	Zfp597	97	42.697	MGP_CAROLIEiJ_G0016437	Zfp867	99	38.462
MGP_CAROLIEiJ_G0020389	Zfp597	65	45.370	MGP_CAROLIEiJ_G0029322	Zfp235	66	38.258
MGP_CAROLIEiJ_G0020389	Zfp597	63	47.321	MGP_CAROLIEiJ_G0029326	Zfp108	69	47.321
MGP_CAROLIEiJ_G0020389	Zfp597	62	46.296	MGP_CAROLIEiJ_G0029327	Zfp93	75	46.296
MGP_CAROLIEiJ_G0020389	Zfp597	96	37.091	MGP_CAROLIEiJ_G0029329	Zfp94	95	36.154
MGP_CAROLIEiJ_G0020389	Zfp597	71	32.026	MGP_CAROLIEiJ_G0016391	Zfp672	88	33.735
MGP_CAROLIEiJ_G0020389	Zfp597	98	37.313	MGP_CAROLIEiJ_G0019949	Zfp251	94	37.313
MGP_CAROLIEiJ_G0020389	Zfp597	64	38.393	MGP_CAROLIEiJ_G0031420	Zfp319	86	38.393
MGP_CAROLIEiJ_G0020389	Zfp597	97	40.476	MGP_CAROLIEiJ_G0018661	Zfp759	99	35.366
MGP_CAROLIEiJ_G0020389	Zfp597	96	33.071	MGP_CAROLIEiJ_G0018660	-	76	33.071
MGP_CAROLIEiJ_G0020389	Zfp597	98	48.649	MGP_CAROLIEiJ_G0021128	Zfp51	95	48.649
MGP_CAROLIEiJ_G0020389	Zfp597	63	43.023	MGP_CAROLIEiJ_G0029490	Zfp420	97	39.259
MGP_CAROLIEiJ_G0020389	Zfp597	66	40.187	MGP_CAROLIEiJ_G0022445	Zfp236	65	37.079
MGP_CAROLIEiJ_G0020389	Zfp597	71	31.076	MGP_CAROLIEiJ_G0024724	Zfp64	60	31.076
MGP_CAROLIEiJ_G0020389	Zfp597	84	35.443	MGP_CAROLIEiJ_G0016306	Zfp354a	70	35.443
MGP_CAROLIEiJ_G0020389	Zfp597	98	49.091	MGP_CAROLIEiJ_G0021132	Zfp948	98	37.500
MGP_CAROLIEiJ_G0020389	Zfp597	63	34.909	MGP_CAROLIEiJ_G0029614	Zfp715	61	34.733
MGP_CAROLIEiJ_G0020389	Zfp597	63	49.074	MGP_CAROLIEiJ_G0029612	Zfp141	50	49.074
MGP_CAROLIEiJ_G0020389	Zfp597	63	34.799	MGP_CAROLIEiJ_G0030498	Zfp768	50	34.351

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_CAROLIEiJ_G0020389	Zfp597	99	71.698	ENSJJAG00000023435	Zfp597	99	71.698	Jaculus_jaculus
MGP_CAROLIEiJ_G0020389	Zfp597	100	85.714	ENSRNOG00000007576	Zfp597	100	85.714	Rattus_norvegicus