EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: MGP_CAROLIEiJ_G0020416 (Gene tree)
Gene ID: 110311546
Gene Symbol: Sept12
Alias: 1700028G04Rik|4933413B09Rik|Septin12
Full Name: septin 12
Gene Type: protein_coding
Species: Mus_caroli
Status: putative
Strand: Minus strand
Length: 10683 bases
Position: chr16:1243412-1254094
Accession: 1918339
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CAROLIEiJ_P0040236	MMR_HSR1	PF01926.23	8.8e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CAROLIEiJ_T0040236	-	2600	-	MGP_CAROLIEiJ_P0040236	317 (aa)	-	-

Gene Model

Click here to download MGP_CAROLIEiJ_G0020416's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CAROLIEiJ_G0020416's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CAROLIEiJ_G0020416	Sept12	84	36.704	MGP_CAROLIEiJ_G0027783	Sept14	56	37.751
MGP_CAROLIEiJ_G0020416	Sept12	81	37.838	MGP_CAROLIEiJ_G0016340	Sept8	56	39.113
MGP_CAROLIEiJ_G0020416	Sept12	77	43.145	MGP_CAROLIEiJ_G0020551	-	67	43.145
MGP_CAROLIEiJ_G0020416	Sept12	78	65.462	MGP_CAROLIEiJ_G0017463	Sept9	82	64.322
MGP_CAROLIEiJ_G0020416	Sept12	80	37.692	MGP_CAROLIEiJ_G0032996	Sept6	67	41.176
MGP_CAROLIEiJ_G0020416	Sept12	81	41.797	MGP_CAROLIEiJ_G0031917	Sept7	56	41.797
MGP_CAROLIEiJ_G0020416	Sept12	84	42.446	MGP_CAROLIEiJ_G0016931	Sept4	92	43.256
MGP_CAROLIEiJ_G0020416	Sept12	84	57.249	MGP_CAROLIEiJ_G0020078	Sept3	75	59.289
MGP_CAROLIEiJ_G0020416	Sept12	77	43.775	MGP_CAROLIEiJ_G0030492	Sept1	100	47.945
MGP_CAROLIEiJ_G0020416	Sept12	84	38.346	MGP_CAROLIEiJ_G0015340	Sept10	57	39.600
MGP_CAROLIEiJ_G0020416	Sept12	82	37.931	MGP_CAROLIEiJ_G0027424	Sept11	57	38.710
MGP_CAROLIEiJ_G0020416	Sept12	81	43.077	MGP_CAROLIEiJ_G0014457	-	100	48.148

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_CAROLIEiJ_G0020416	Sept12	79	88.000	ENSG00000140623	SEPT12	80	87.838	Homo_sapiens
MGP_CAROLIEiJ_G0020416	Sept12	80	86.614	ENSAMEG00000001746	SEPT12	71	86.614	Ailuropoda_melanoleuca
MGP_CAROLIEiJ_G0020416	Sept12	79	65.873	ENSATEG00000007502	sept12	58	65.873	Anabas_testudineus
MGP_CAROLIEiJ_G0020416	Sept12	82	69.663	ENSACAG00000000531	-	75	71.373	Anolis_carolinensis
MGP_CAROLIEiJ_G0020416	Sept12	80	85.827	ENSANAG00000035914	SEPT12	71	85.827	Aotus_nancymaae
MGP_CAROLIEiJ_G0020416	Sept12	79	67.063	ENSAMXG00000013711	sept12	66	67.063	Astyanax_mexicanus
MGP_CAROLIEiJ_G0020416	Sept12	80	86.220	ENSBTAG00000016330	SEPT12	69	87.200	Bos_taurus
MGP_CAROLIEiJ_G0020416	Sept12	86	85.294	ENSCAFG00000019171	SEPT12	71	86.220	Canis_familiaris
MGP_CAROLIEiJ_G0020416	Sept12	86	81.053	ENSCAFG00020024938	SEPT12	94	81.648	Canis_lupus_dingo
MGP_CAROLIEiJ_G0020416	Sept12	79	87.200	ENSCHIG00000013270	SEPT12	71	87.200	Capra_hircus
MGP_CAROLIEiJ_G0020416	Sept12	80	85.827	ENSTSYG00000008537	SEPT12	71	85.827	Carlito_syrichta
MGP_CAROLIEiJ_G0020416	Sept12	77	88.571	ENSCAPG00000013691	SEPT12	69	88.571	Cavia_aperea
MGP_CAROLIEiJ_G0020416	Sept12	80	88.976	ENSCPOG00000011596	SEPT12	70	88.976	Cavia_porcellus
MGP_CAROLIEiJ_G0020416	Sept12	79	87.600	ENSCCAG00000021929	SEPT12	71	87.402	Cebus_capucinus
MGP_CAROLIEiJ_G0020416	Sept12	79	88.400	ENSCATG00000033120	SEPT12	82	88.288	Cercocebus_atys
MGP_CAROLIEiJ_G0020416	Sept12	86	84.615	ENSCLAG00000011397	SEPT12	90	84.615	Chinchilla_lanigera
MGP_CAROLIEiJ_G0020416	Sept12	79	52.672	ENSCSAG00000008975	SEPT12	71	53.008	Chlorocebus_sabaeus
MGP_CAROLIEiJ_G0020416	Sept12	84	70.149	ENSCPBG00000026556	SEPT12	74	73.307	Chrysemys_picta_bellii
MGP_CAROLIEiJ_G0020416	Sept12	77	50.699	ENSCSAVG00000001804	-	87	50.699	Ciona_savignyi
MGP_CAROLIEiJ_G0020416	Sept12	79	87.600	ENSCANG00000035476	SEPT12	71	87.402	Colobus_angolensis_palliatus
MGP_CAROLIEiJ_G0020416	Sept12	97	83.333	ENSCGRG00001012476	Sept12	100	83.333	Cricetulus_griseus_chok1gshd
MGP_CAROLIEiJ_G0020416	Sept12	97	83.333	ENSCGRG00000015421	Sept12	100	83.333	Cricetulus_griseus_crigri
MGP_CAROLIEiJ_G0020416	Sept12	79	65.873	ENSCSEG00000011498	sept12	70	65.873	Cynoglossus_semilaevis
MGP_CAROLIEiJ_G0020416	Sept12	84	65.299	ENSDARG00000019191	sept12	81	69.504	Danio_rerio
MGP_CAROLIEiJ_G0020416	Sept12	84	90.189	ENSDORG00000011984	Sept12	93	90.189	Dipodomys_ordii
MGP_CAROLIEiJ_G0020416	Sept12	77	69.388	ENSETEG00000016201	SEPT12	68	69.388	Echinops_telfairi
MGP_CAROLIEiJ_G0020416	Sept12	74	86.017	ENSEASG00005000570	SEPT12	87	86.486	Equus_asinus_asinus
MGP_CAROLIEiJ_G0020416	Sept12	85	85.874	ENSECAG00000018692	SEPT12	66	85.827	Equus_caballus
MGP_CAROLIEiJ_G0020416	Sept12	80	85.882	ENSFCAG00000029843	SEPT12	71	86.220	Felis_catus
MGP_CAROLIEiJ_G0020416	Sept12	82	72.519	ENSFALG00000004482	SEPT12	68	74.603	Ficedula_albicollis
MGP_CAROLIEiJ_G0020416	Sept12	85	84.328	ENSFDAG00000016066	SEPT12	93	84.328	Fukomys_damarensis
MGP_CAROLIEiJ_G0020416	Sept12	79	66.667	ENSFHEG00000008995	sept12	63	66.667	Fundulus_heteroclitus
MGP_CAROLIEiJ_G0020416	Sept12	79	66.932	ENSGMOG00000009662	sept12	81	66.932	Gadus_morhua
MGP_CAROLIEiJ_G0020416	Sept12	91	67.466	ENSGALG00000029027	SEPT12	72	73.307	Gallus_gallus
MGP_CAROLIEiJ_G0020416	Sept12	84	63.910	ENSGAFG00000005527	sept12	73	66.270	Gambusia_affinis
MGP_CAROLIEiJ_G0020416	Sept12	79	66.667	ENSGACG00000000503	sept12	74	66.667	Gasterosteus_aculeatus
MGP_CAROLIEiJ_G0020416	Sept12	84	67.164	ENSGAGG00000016756	SEPT12	74	70.120	Gopherus_agassizii
MGP_CAROLIEiJ_G0020416	Sept12	85	87.037	ENSGGOG00000007528	SEPT12	71	87.402	Gorilla_gorilla
MGP_CAROLIEiJ_G0020416	Sept12	80	88.189	ENSHGLG00000014562	SEPT12	72	88.189	Heterocephalus_glaber_female
MGP_CAROLIEiJ_G0020416	Sept12	80	88.189	ENSHGLG00100000756	SEPT12	72	88.189	Heterocephalus_glaber_male
MGP_CAROLIEiJ_G0020416	Sept12	84	64.794	ENSIPUG00000015361	sept12	67	67.331	Ictalurus_punctatus
MGP_CAROLIEiJ_G0020416	Sept12	80	88.189	ENSSTOG00000012312	SEPT12	71	88.189	Ictidomys_tridecemlineatus
MGP_CAROLIEiJ_G0020416	Sept12	70	90.583	ENSJJAG00000024267	Sept12	72	90.583	Jaculus_jaculus
MGP_CAROLIEiJ_G0020416	Sept12	79	65.079	ENSKMAG00000006409	sept12	74	65.079	Kryptolebias_marmoratus
MGP_CAROLIEiJ_G0020416	Sept12	83	65.283	ENSLBEG00000004076	sept12	75	65.283	Labrus_bergylta
MGP_CAROLIEiJ_G0020416	Sept12	85	86.347	ENSLAFG00000030360	SEPT12	71	86.328	Loxodonta_africana
MGP_CAROLIEiJ_G0020416	Sept12	79	88.800	ENSMFAG00000043961	SEPT12	71	88.583	Macaca_fascicularis
MGP_CAROLIEiJ_G0020416	Sept12	79	88.400	ENSMLEG00000019167	SEPT12	71	88.189	Mandrillus_leucophaeus
MGP_CAROLIEiJ_G0020416	Sept12	79	66.270	ENSMAMG00000003208	sept12	63	66.270	Mastacembelus_armatus
MGP_CAROLIEiJ_G0020416	Sept12	79	72.908	ENSMGAG00000009617	SEPT12	74	72.908	Meleagris_gallopavo
MGP_CAROLIEiJ_G0020416	Sept12	86	95.956	ENSMAUG00000013139	Sept12	76	95.956	Mesocricetus_auratus
MGP_CAROLIEiJ_G0020416	Sept12	79	86.000	ENSMICG00000015913	SEPT12	71	85.827	Microcebus_murinus
MGP_CAROLIEiJ_G0020416	Sept12	86	95.588	ENSMOCG00000017045	Sept12	94	89.619	Microtus_ochrogaster
MGP_CAROLIEiJ_G0020416	Sept12	85	81.413	ENSMODG00000006197	SEPT12	71	83.333	Monodelphis_domestica
MGP_CAROLIEiJ_G0020416	Sept12	79	66.534	ENSMALG00000003054	sept12	75	66.534	Monopterus_albus
MGP_CAROLIEiJ_G0020416	Sept12	100	98.738	ENSMUSG00000022542	Sept12	100	98.738	Mus_musculus
MGP_CAROLIEiJ_G0020416	Sept12	100	95.899	MGP_PahariEiJ_G0016124	Sept12	100	95.899	Mus_pahari
MGP_CAROLIEiJ_G0020416	Sept12	100	98.738	MGP_SPRETEiJ_G0021310	Sept12	100	98.738	Mus_spretus
MGP_CAROLIEiJ_G0020416	Sept12	80	85.827	ENSMPUG00000014915	SEPT12	71	85.827	Mustela_putorius_furo
MGP_CAROLIEiJ_G0020416	Sept12	85	84.444	ENSMLUG00000003525	SEPT12	71	86.454	Myotis_lucifugus
MGP_CAROLIEiJ_G0020416	Sept12	89	91.489	ENSNGAG00000021915	Sept12	92	91.489	Nannospalax_galili
MGP_CAROLIEiJ_G0020416	Sept12	79	81.200	ENSNLEG00000009906	SEPT12	72	82.283	Nomascus_leucogenys
MGP_CAROLIEiJ_G0020416	Sept12	69	82.727	ENSMEUG00000003153	SEPT12	91	81.696	Notamacropus_eugenii
MGP_CAROLIEiJ_G0020416	Sept12	85	85.502	ENSODEG00000013145	SEPT12	70	86.905	Octodon_degus
MGP_CAROLIEiJ_G0020416	Sept12	80	83.922	ENSOCUG00000008343	SEPT12	71	83.922	Oryctolagus_cuniculus
MGP_CAROLIEiJ_G0020416	Sept12	79	65.079	ENSORLG00000019251	-	75	65.079	Oryzias_latipes
MGP_CAROLIEiJ_G0020416	Sept12	80	64.961	ENSORLG00015007797	-	76	64.961	Oryzias_latipes_hsok
MGP_CAROLIEiJ_G0020416	Sept12	79	64.683	ENSOMEG00000002676	-	61	64.683	Oryzias_melastigma
MGP_CAROLIEiJ_G0020416	Sept12	79	88.000	ENSOGAG00000025966	SEPT12	71	87.795	Otolemur_garnettii
MGP_CAROLIEiJ_G0020416	Sept12	79	86.800	ENSOARG00000003930	SEPT12	71	86.800	Ovis_aries
MGP_CAROLIEiJ_G0020416	Sept12	79	87.600	ENSPPAG00000033910	SEPT12	71	87.402	Pan_paniscus
MGP_CAROLIEiJ_G0020416	Sept12	80	67.843	ENSPPRG00000006622	SEPT12	67	68.110	Panthera_pardus
MGP_CAROLIEiJ_G0020416	Sept12	80	84.706	ENSPTIG00000015526	SEPT12	71	85.039	Panthera_tigris_altaica
MGP_CAROLIEiJ_G0020416	Sept12	79	87.600	ENSPTRG00000007728	SEPT12	71	87.402	Pan_troglodytes
MGP_CAROLIEiJ_G0020416	Sept12	79	88.400	ENSPANG00000022807	SEPT12	82	88.288	Papio_anubis
MGP_CAROLIEiJ_G0020416	Sept12	83	68.165	ENSPKIG00000009934	-	72	71.951	Paramormyrops_kingsleyae
MGP_CAROLIEiJ_G0020416	Sept12	86	63.542	ENSPKIG00000019480	sept12	68	69.048	Paramormyrops_kingsleyae
MGP_CAROLIEiJ_G0020416	Sept12	67	67.136	ENSPSIG00000014795	SEPT12	57	70.149	Pelodiscus_sinensis
MGP_CAROLIEiJ_G0020416	Sept12	84	59.328	ENSPMGG00000019506	-	69	61.176	Periophthalmus_magnuspinnatus
MGP_CAROLIEiJ_G0020416	Sept12	79	83.600	ENSPCIG00000026671	SEPT12	71	82.677	Phascolarctos_cinereus
MGP_CAROLIEiJ_G0020416	Sept12	86	62.681	ENSPFOG00000015822	sept12	73	66.270	Poecilia_formosa
MGP_CAROLIEiJ_G0020416	Sept12	84	64.419	ENSPLAG00000004719	sept12	74	65.882	Poecilia_latipinna
MGP_CAROLIEiJ_G0020416	Sept12	84	64.419	ENSPMEG00000022516	sept12	74	65.882	Poecilia_mexicana
MGP_CAROLIEiJ_G0020416	Sept12	79	87.200	ENSPCOG00000014037	SEPT12	71	87.008	Propithecus_coquereli
MGP_CAROLIEiJ_G0020416	Sept12	80	86.275	ENSPVAG00000016080	SEPT12	67	86.220	Pteropus_vampyrus
MGP_CAROLIEiJ_G0020416	Sept12	86	64.234	ENSPNAG00000026381	sept12	66	67.460	Pygocentrus_nattereri
MGP_CAROLIEiJ_G0020416	Sept12	86	97.426	ENSRNOG00000003137	Sept12	76	97.426	Rattus_norvegicus
MGP_CAROLIEiJ_G0020416	Sept12	79	87.200	ENSRBIG00000024546	SEPT12	71	87.008	Rhinopithecus_bieti
MGP_CAROLIEiJ_G0020416	Sept12	79	87.600	ENSRROG00000028781	SEPT12	71	87.402	Rhinopithecus_roxellana
MGP_CAROLIEiJ_G0020416	Sept12	79	88.800	ENSSBOG00000036170	SEPT12	71	88.583	Saimiri_boliviensis_boliviensis
MGP_CAROLIEiJ_G0020416	Sept12	79	84.000	ENSSHAG00000007036	SEPT12	68	84.000	Sarcophilus_harrisii
MGP_CAROLIEiJ_G0020416	Sept12	79	69.841	ENSSFOG00015023684	sept12	72	69.841	Scleropages_formosus
MGP_CAROLIEiJ_G0020416	Sept12	85	66.667	ENSSFOG00015010148	-	83	69.048	Scleropages_formosus
MGP_CAROLIEiJ_G0020416	Sept12	79	66.667	ENSSMAG00000015399	sept12	60	66.667	Scophthalmus_maximus
MGP_CAROLIEiJ_G0020416	Sept12	86	68.132	ENSSPUG00000009703	SEPT12	73	72.908	Sphenodon_punctatus
MGP_CAROLIEiJ_G0020416	Sept12	79	68.924	ENSTGUG00000003705	SEPT12	85	68.924	Taeniopygia_guttata
MGP_CAROLIEiJ_G0020416	Sept12	79	65.873	ENSTRUG00000021364	sept12	56	65.873	Takifugu_rubripes
MGP_CAROLIEiJ_G0020416	Sept12	80	87.795	ENSTTRG00000005489	SEPT12	68	87.795	Tursiops_truncatus
MGP_CAROLIEiJ_G0020416	Sept12	80	86.614	ENSUMAG00000002994	SEPT12	88	85.333	Ursus_maritimus
MGP_CAROLIEiJ_G0020416	Sept12	63	84.577	ENSVPAG00000010635	-	76	84.577	Vicugna_pacos
MGP_CAROLIEiJ_G0020416	Sept12	80	86.220	ENSVVUG00000016536	SEPT12	71	86.220	Vulpes_vulpes
MGP_CAROLIEiJ_G0020416	Sept12	79	66.008	ENSXETG00000009151	sept12	76	66.270	Xenopus_tropicalis
MGP_CAROLIEiJ_G0020416	Sept12	79	66.270	ENSXCOG00000007643	sept12	71	66.270	Xiphophorus_couchianus
MGP_CAROLIEiJ_G0020416	Sept12	79	66.667	ENSXMAG00000012528	sept12	58	66.667	Xiphophorus_maculatus