EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: MGP_CAROLIEiJ_G0020438 (Gene tree)
Gene ID: 110311863
Gene Symbol: Rpl39l
Alias: 4930517K11Rik
Full Name: 60S ribosomal protein L39-like
Gene Type: protein_coding
Species: Mus_caroli
Status: putative
Strand: Plus strand
Length: 4688 bases
Position: chr16:6707052-6711739
Accession: 110311863
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CAROLIEiJ_P0040318	Ribosomal_L39	PF00832.20	3.7e-23	1	1
MGP_CAROLIEiJ_P0040319	Ribosomal_L39	PF00832.20	3.7e-23	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CAROLIEiJ_T0040318	-	550	-	MGP_CAROLIEiJ_P0040318	51 (aa)	XP_021041092	UPI0000025BAA
MGP_CAROLIEiJ_T0040319	-	787	-	MGP_CAROLIEiJ_P0040319	51 (aa)	XP_021041092	UPI0000025BAA

Gene Model

Click here to download MGP_CAROLIEiJ_G0020438's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CAROLIEiJ_G0020438's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CAROLIEiJ_G0020438	Rpl39l	100	94.118	MGP_CAROLIEiJ_G0032998	-	100	94.118

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_CAROLIEiJ_G0020438	Rpl39l	100	96.078	ENSAMEG00000019848	-	100	96.078	Ailuropoda_melanoleuca
MGP_CAROLIEiJ_G0020438	Rpl39l	100	88.235	ENSANAG00000016436	-	100	88.235	Aotus_nancymaae
MGP_CAROLIEiJ_G0020438	Rpl39l	100	94.118	ENSANAG00000016046	-	100	94.118	Aotus_nancymaae
MGP_CAROLIEiJ_G0020438	Rpl39l	100	96.078	ENSANAG00000031418	-	100	96.078	Aotus_nancymaae
MGP_CAROLIEiJ_G0020438	Rpl39l	100	92.157	ENSCAFG00020023883	-	100	92.157	Canis_lupus_dingo
MGP_CAROLIEiJ_G0020438	Rpl39l	100	88.235	ENSCAFG00020027515	-	100	88.235	Canis_lupus_dingo
MGP_CAROLIEiJ_G0020438	Rpl39l	100	94.118	ENSCAFG00020026664	-	100	94.118	Canis_lupus_dingo
MGP_CAROLIEiJ_G0020438	Rpl39l	100	94.118	ENSCAFG00020009904	-	100	94.118	Canis_lupus_dingo
MGP_CAROLIEiJ_G0020438	Rpl39l	100	92.157	ENSCAFG00020002578	-	100	92.157	Canis_lupus_dingo
MGP_CAROLIEiJ_G0020438	Rpl39l	100	94.118	ENSTSYG00000026785	-	100	94.118	Carlito_syrichta
MGP_CAROLIEiJ_G0020438	Rpl39l	90	89.130	ENSTSYG00000026787	-	82	89.130	Carlito_syrichta
MGP_CAROLIEiJ_G0020438	Rpl39l	100	96.078	ENSCAPG00000007210	-	100	96.078	Cavia_aperea
MGP_CAROLIEiJ_G0020438	Rpl39l	100	96.078	ENSCPOG00000036636	-	100	96.078	Cavia_porcellus
MGP_CAROLIEiJ_G0020438	Rpl39l	100	94.118	ENSCLAG00000017874	-	100	94.118	Chinchilla_lanigera
MGP_CAROLIEiJ_G0020438	Rpl39l	100	90.196	ENSCLAG00000017707	-	100	90.196	Chinchilla_lanigera
MGP_CAROLIEiJ_G0020438	Rpl39l	100	84.314	ENSCGRG00001008057	-	100	84.314	Cricetulus_griseus_chok1gshd
MGP_CAROLIEiJ_G0020438	Rpl39l	100	92.157	ENSCGRG00001012052	-	100	92.157	Cricetulus_griseus_chok1gshd
MGP_CAROLIEiJ_G0020438	Rpl39l	100	98.039	ENSCGRG00001003230	Rpl39l	100	98.039	Cricetulus_griseus_chok1gshd
MGP_CAROLIEiJ_G0020438	Rpl39l	100	98.039	ENSCGRG00000018615	Rpl39l	100	98.039	Cricetulus_griseus_crigri
MGP_CAROLIEiJ_G0020438	Rpl39l	100	92.157	ENSCGRG00000019654	-	100	92.157	Cricetulus_griseus_crigri
MGP_CAROLIEiJ_G0020438	Rpl39l	100	92.157	ENSDORG00000027732	-	100	92.157	Dipodomys_ordii
MGP_CAROLIEiJ_G0020438	Rpl39l	100	94.118	ENSDORG00000028485	-	100	94.118	Dipodomys_ordii
MGP_CAROLIEiJ_G0020438	Rpl39l	100	80.392	ENSFCAG00000044333	RPL39L	100	80.392	Felis_catus
MGP_CAROLIEiJ_G0020438	Rpl39l	100	71.154	ENSFCAG00000038709	-	91	71.154	Felis_catus
MGP_CAROLIEiJ_G0020438	Rpl39l	100	96.078	ENSFDAG00000021400	-	100	96.078	Fukomys_damarensis
MGP_CAROLIEiJ_G0020438	Rpl39l	92	91.489	ENSGGOG00000040312	-	65	91.489	Gorilla_gorilla
MGP_CAROLIEiJ_G0020438	Rpl39l	100	88.235	ENSGGOG00000036596	-	100	88.235	Gorilla_gorilla
MGP_CAROLIEiJ_G0020438	Rpl39l	100	92.157	ENSHGLG00000020604	-	100	92.157	Heterocephalus_glaber_female
MGP_CAROLIEiJ_G0020438	Rpl39l	100	92.157	ENSHGLG00100011216	-	100	92.157	Heterocephalus_glaber_male
MGP_CAROLIEiJ_G0020438	Rpl39l	100	96.078	ENSSTOG00000030492	-	100	96.078	Ictidomys_tridecemlineatus
MGP_CAROLIEiJ_G0020438	Rpl39l	100	94.118	ENSSTOG00000028051	-	100	94.118	Ictidomys_tridecemlineatus
MGP_CAROLIEiJ_G0020438	Rpl39l	100	88.235	ENSJJAG00000010041	-	100	88.235	Jaculus_jaculus
MGP_CAROLIEiJ_G0020438	Rpl39l	100	92.157	ENSLAFG00000028648	-	100	92.157	Loxodonta_africana
MGP_CAROLIEiJ_G0020438	Rpl39l	100	94.118	ENSMFAG00000020492	-	100	94.118	Macaca_fascicularis
MGP_CAROLIEiJ_G0020438	Rpl39l	100	96.078	ENSMMUG00000044527	-	100	96.078	Macaca_mulatta
MGP_CAROLIEiJ_G0020438	Rpl39l	100	94.118	ENSMMUG00000045452	-	100	94.118	Macaca_mulatta
MGP_CAROLIEiJ_G0020438	Rpl39l	100	92.157	ENSMMUG00000038479	-	100	92.157	Macaca_mulatta
MGP_CAROLIEiJ_G0020438	Rpl39l	100	88.235	ENSMNEG00000001683	-	68	88.235	Macaca_nemestrina
MGP_CAROLIEiJ_G0020438	Rpl39l	100	94.118	ENSMNEG00000000126	-	100	94.118	Macaca_nemestrina
MGP_CAROLIEiJ_G0020438	Rpl39l	98	94.000	ENSMLEG00000000739	-	100	94.000	Mandrillus_leucophaeus
MGP_CAROLIEiJ_G0020438	Rpl39l	100	90.196	ENSMLEG00000009433	-	100	90.196	Mandrillus_leucophaeus
MGP_CAROLIEiJ_G0020438	Rpl39l	100	94.118	ENSMLEG00000018088	-	100	94.118	Mandrillus_leucophaeus
MGP_CAROLIEiJ_G0020438	Rpl39l	100	96.078	ENSMLEG00000003517	-	100	96.078	Mandrillus_leucophaeus
MGP_CAROLIEiJ_G0020438	Rpl39l	100	98.039	ENSMAUG00000015776	Rpl39l	100	98.039	Mesocricetus_auratus
MGP_CAROLIEiJ_G0020438	Rpl39l	100	90.196	ENSMAUG00000002516	-	100	90.196	Mesocricetus_auratus
MGP_CAROLIEiJ_G0020438	Rpl39l	100	96.078	ENSMOCG00000001545	Rpl39l	100	96.078	Microtus_ochrogaster
MGP_CAROLIEiJ_G0020438	Rpl39l	100	96.078	ENSMOCG00000002138	-	100	96.078	Microtus_ochrogaster
MGP_CAROLIEiJ_G0020438	Rpl39l	100	100.000	ENSMUSG00000039209	Rpl39l	100	100.000	Mus_musculus
MGP_CAROLIEiJ_G0020438	Rpl39l	100	100.000	MGP_SPRETEiJ_G0021332	Rpl39l	100	100.000	Mus_spretus
MGP_CAROLIEiJ_G0020438	Rpl39l	100	90.196	ENSMLUG00000025012	-	100	90.196	Myotis_lucifugus
MGP_CAROLIEiJ_G0020438	Rpl39l	100	90.196	ENSMLUG00000015029	-	100	90.196	Myotis_lucifugus
MGP_CAROLIEiJ_G0020438	Rpl39l	100	86.275	ENSNGAG00000008665	-	100	86.275	Nannospalax_galili
MGP_CAROLIEiJ_G0020438	Rpl39l	90	89.130	ENSNGAG00000022494	-	96	89.130	Nannospalax_galili
MGP_CAROLIEiJ_G0020438	Rpl39l	100	94.118	ENSNGAG00000012570	Rpl39l	100	94.118	Nannospalax_galili
MGP_CAROLIEiJ_G0020438	Rpl39l	100	94.118	ENSODEG00000020114	-	100	94.118	Octodon_degus
MGP_CAROLIEiJ_G0020438	Rpl39l	100	92.157	ENSOGAG00000024799	-	100	92.157	Otolemur_garnettii
MGP_CAROLIEiJ_G0020438	Rpl39l	100	86.275	ENSPPRG00000020779	-	100	86.275	Panthera_pardus
MGP_CAROLIEiJ_G0020438	Rpl39l	100	88.235	ENSPTIG00000006209	-	100	88.235	Panthera_tigris_altaica
MGP_CAROLIEiJ_G0020438	Rpl39l	98	94.000	ENSPANG00000030226	-	100	94.000	Papio_anubis
MGP_CAROLIEiJ_G0020438	Rpl39l	100	100.000	ENSRNOG00000032300	Rpl39l	100	100.000	Rattus_norvegicus
MGP_CAROLIEiJ_G0020438	Rpl39l	100	94.118	ENSRBIG00000010842	-	100	94.118	Rhinopithecus_bieti
MGP_CAROLIEiJ_G0020438	Rpl39l	100	94.118	ENSRROG00000023025	-	100	94.118	Rhinopithecus_roxellana
MGP_CAROLIEiJ_G0020438	Rpl39l	100	94.118	ENSRROG00000037724	-	100	94.118	Rhinopithecus_roxellana
MGP_CAROLIEiJ_G0020438	Rpl39l	100	90.196	ENSSSCG00000038385	-	69	90.196	Sus_scrofa
MGP_CAROLIEiJ_G0020438	Rpl39l	100	84.314	ENSSSCG00000033224	-	100	84.314	Sus_scrofa
MGP_CAROLIEiJ_G0020438	Rpl39l	90	91.304	ENSUAMG00000000067	-	98	91.304	Ursus_americanus
MGP_CAROLIEiJ_G0020438	Rpl39l	100	96.078	ENSUAMG00000020990	-	100	96.078	Ursus_americanus
MGP_CAROLIEiJ_G0020438	Rpl39l	100	96.078	ENSUMAG00000015280	-	100	96.078	Ursus_maritimus
MGP_CAROLIEiJ_G0020438	Rpl39l	98	92.000	ENSVVUG00000022951	-	100	92.000	Vulpes_vulpes
MGP_CAROLIEiJ_G0020438	Rpl39l	100	86.275	ENSVVUG00000014095	-	100	86.275	Vulpes_vulpes
MGP_CAROLIEiJ_G0020438	Rpl39l	100	96.078	ENSVVUG00000030147	-	100	96.078	Vulpes_vulpes