EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_CAROLIEiJ_G0020542 (Gene tree)
Gene ID: 110311762
Gene Symbol: -
Alias: -
Full Name: DGCR8%2C microprocessor complex subunit
Gene Type: protein_coding
Species: Mus_caroli
Status: putative
Strand: Minus strand
Length: 34207 bases
Position: chr16:14748673-14782879
Accession: 110311762
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CAROLIEiJ_P0040775	dsrm	PF00035.26	3e-21	1	2
MGP_CAROLIEiJ_P0040775	dsrm	PF00035.26	3e-21	2	2
MGP_CAROLIEiJ_P0040776	dsrm	PF00035.26	3e-21	1	2
MGP_CAROLIEiJ_P0040776	dsrm	PF00035.26	3e-21	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CAROLIEiJ_T0040781	-	98	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0040780	-	2541	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0040775	-	4322	XM_021185281	MGP_CAROLIEiJ_P0040775	773 (aa)	XP_021040940	UPI000A305ED7
MGP_CAROLIEiJ_T0040776	-	4524	-	MGP_CAROLIEiJ_P0040776	773 (aa)	XP_021040941	UPI000A305ED7
MGP_CAROLIEiJ_T0040777	-	1248	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0040778	-	643	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0040779	-	3389	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_CAROLIEiJ_G0020542's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CAROLIEiJ_G0020542's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_CAROLIEiJ_G0020542	-	100	95.213	ENSG00000128191	DGCR8	100	95.213	Homo_sapiens
MGP_CAROLIEiJ_G0020542	-	100	96.895	ENSAMEG00000011732	DGCR8	100	96.895	Ailuropoda_melanoleuca
MGP_CAROLIEiJ_G0020542	-	95	72.763	ENSACIG00000020103	dgcr8	100	70.566	Amphilophus_citrinellus
MGP_CAROLIEiJ_G0020542	-	95	73.421	ENSAOCG00000009444	dgcr8	100	71.195	Amphiprion_ocellaris
MGP_CAROLIEiJ_G0020542	-	95	73.289	ENSAPEG00000004916	dgcr8	100	71.069	Amphiprion_percula
MGP_CAROLIEiJ_G0020542	-	95	73.822	ENSATEG00000015435	dgcr8	100	71.589	Anabas_testudineus
MGP_CAROLIEiJ_G0020542	-	100	85.052	ENSAPLG00000004281	DGCR8	100	85.052	Anas_platyrhynchos
MGP_CAROLIEiJ_G0020542	-	100	82.861	ENSACAG00000008031	DGCR8	100	82.861	Anolis_carolinensis
MGP_CAROLIEiJ_G0020542	-	100	94.825	ENSANAG00000013710	DGCR8	100	94.825	Aotus_nancymaae
MGP_CAROLIEiJ_G0020542	-	95	72.775	ENSACLG00000019757	dgcr8	100	72.304	Astatotilapia_calliptera
MGP_CAROLIEiJ_G0020542	-	95	73.177	ENSAMXG00000017429	dgcr8	100	71.233	Astyanax_mexicanus
MGP_CAROLIEiJ_G0020542	-	100	90.168	ENSBTAG00000019869	DGCR8	100	90.298	Bos_taurus
MGP_CAROLIEiJ_G0020542	-	100	95.084	ENSCJAG00000010780	DGCR8	100	95.084	Callithrix_jacchus
MGP_CAROLIEiJ_G0020542	-	100	96.636	ENSCAFG00000014196	DGCR8	100	96.636	Canis_familiaris
MGP_CAROLIEiJ_G0020542	-	100	96.636	ENSCAFG00020007769	DGCR8	100	96.636	Canis_lupus_dingo
MGP_CAROLIEiJ_G0020542	-	100	89.133	ENSCHIG00000019845	DGCR8	100	89.263	Capra_hircus
MGP_CAROLIEiJ_G0020542	-	100	95.213	ENSTSYG00000027809	DGCR8	100	95.213	Carlito_syrichta
MGP_CAROLIEiJ_G0020542	-	89	100.000	ENSCAPG00000007081	DGCR8	100	100.000	Cavia_aperea
MGP_CAROLIEiJ_G0020542	-	100	96.507	ENSCPOG00000002952	DGCR8	100	96.556	Cavia_porcellus
MGP_CAROLIEiJ_G0020542	-	100	95.084	ENSCCAG00000036620	DGCR8	100	95.084	Cebus_capucinus
MGP_CAROLIEiJ_G0020542	-	100	95.084	ENSCATG00000030676	DGCR8	100	95.084	Cercocebus_atys
MGP_CAROLIEiJ_G0020542	-	100	96.119	ENSCLAG00000013910	DGCR8	100	96.119	Chinchilla_lanigera
MGP_CAROLIEiJ_G0020542	-	100	95.084	ENSCSAG00000011993	DGCR8	100	95.084	Chlorocebus_sabaeus
MGP_CAROLIEiJ_G0020542	-	100	84.367	ENSCPBG00000016973	DGCR8	100	84.367	Chrysemys_picta_bellii
MGP_CAROLIEiJ_G0020542	-	100	95.084	ENSCANG00000029485	DGCR8	100	95.084	Colobus_angolensis_palliatus
MGP_CAROLIEiJ_G0020542	-	100	98.706	ENSCGRG00001000935	-	100	98.706	Cricetulus_griseus_chok1gshd
MGP_CAROLIEiJ_G0020542	-	100	98.706	ENSCGRG00000005319	-	100	98.706	Cricetulus_griseus_crigri
MGP_CAROLIEiJ_G0020542	-	95	70.619	ENSCSEG00000011546	dgcr8	100	67.658	Cynoglossus_semilaevis
MGP_CAROLIEiJ_G0020542	-	95	72.332	ENSCVAG00000008664	dgcr8	100	70.151	Cyprinodon_variegatus
MGP_CAROLIEiJ_G0020542	-	95	72.562	ENSDARG00000035564	dgcr8	100	70.398	Danio_rerio
MGP_CAROLIEiJ_G0020542	-	100	94.567	ENSDNOG00000010345	DGCR8	100	94.567	Dasypus_novemcinctus
MGP_CAROLIEiJ_G0020542	-	100	96.507	ENSDORG00000028551	-	100	96.507	Dipodomys_ordii
MGP_CAROLIEiJ_G0020542	-	75	38.462	FBgn0039861	pasha	91	37.869	Drosophila_melanogaster
MGP_CAROLIEiJ_G0020542	-	68	88.750	ENSETEG00000015987	-	68	88.750	Echinops_telfairi
MGP_CAROLIEiJ_G0020542	-	69	47.492	ENSEBUG00000011988	dgcr8	87	45.109	Eptatretus_burgeri
MGP_CAROLIEiJ_G0020542	-	100	95.213	ENSEASG00005010521	DGCR8	100	95.213	Equus_asinus_asinus
MGP_CAROLIEiJ_G0020542	-	100	95.213	ENSECAG00000009295	DGCR8	100	95.213	Equus_caballus
MGP_CAROLIEiJ_G0020542	-	87	97.500	ENSEEUG00000011818	DGCR8	91	97.500	Erinaceus_europaeus
MGP_CAROLIEiJ_G0020542	-	96	73.740	ENSELUG00000006969	dgcr8	100	71.665	Esox_lucius
MGP_CAROLIEiJ_G0020542	-	100	95.990	ENSFCAG00000006801	DGCR8	100	96.021	Felis_catus
MGP_CAROLIEiJ_G0020542	-	100	84.407	ENSFALG00000008149	DGCR8	100	84.407	Ficedula_albicollis
MGP_CAROLIEiJ_G0020542	-	100	96.766	ENSFDAG00000008236	DGCR8	100	96.766	Fukomys_damarensis
MGP_CAROLIEiJ_G0020542	-	95	72.691	ENSFHEG00000007016	dgcr8	99	70.701	Fundulus_heteroclitus
MGP_CAROLIEiJ_G0020542	-	95	73.351	ENSGMOG00000007715	dgcr8	100	70.897	Gadus_morhua
MGP_CAROLIEiJ_G0020542	-	100	84.794	ENSGALG00000033126	DGCR8	100	84.794	Gallus_gallus
MGP_CAROLIEiJ_G0020542	-	95	70.490	ENSGAFG00000006516	dgcr8	100	68.927	Gambusia_affinis
MGP_CAROLIEiJ_G0020542	-	95	73.698	ENSGACG00000012975	dgcr8	100	71.429	Gasterosteus_aculeatus
MGP_CAROLIEiJ_G0020542	-	100	84.774	ENSGAGG00000024260	DGCR8	100	84.774	Gopherus_agassizii
MGP_CAROLIEiJ_G0020542	-	100	95.084	ENSGGOG00000000780	DGCR8	100	95.084	Gorilla_gorilla
MGP_CAROLIEiJ_G0020542	-	95	72.775	ENSHBUG00000008555	dgcr8	100	70.588	Haplochromis_burtoni
MGP_CAROLIEiJ_G0020542	-	100	96.507	ENSHGLG00000016999	DGCR8	100	96.507	Heterocephalus_glaber_female
MGP_CAROLIEiJ_G0020542	-	100	96.507	ENSHGLG00100014468	DGCR8	100	96.507	Heterocephalus_glaber_male
MGP_CAROLIEiJ_G0020542	-	100	68.290	ENSHCOG00000003315	dgcr8	100	68.204	Hippocampus_comes
MGP_CAROLIEiJ_G0020542	-	95	72.715	ENSIPUG00000016755	DGCR8	99	70.253	Ictalurus_punctatus
MGP_CAROLIEiJ_G0020542	-	100	96.636	ENSSTOG00000023936	DGCR8	100	96.636	Ictidomys_tridecemlineatus
MGP_CAROLIEiJ_G0020542	-	100	96.507	ENSJJAG00000014171	-	100	96.507	Jaculus_jaculus
MGP_CAROLIEiJ_G0020542	-	95	73.298	ENSKMAG00000009087	dgcr8	99	71.649	Kryptolebias_marmoratus
MGP_CAROLIEiJ_G0020542	-	95	70.855	ENSLBEG00000025152	dgcr8	100	69.183	Labrus_bergylta
MGP_CAROLIEiJ_G0020542	-	95	77.570	ENSLACG00000017462	DGCR8	99	76.883	Latimeria_chalumnae
MGP_CAROLIEiJ_G0020542	-	100	74.055	ENSLOCG00000002491	dgcr8	100	74.055	Lepisosteus_oculatus
MGP_CAROLIEiJ_G0020542	-	100	96.248	ENSLAFG00000013724	DGCR8	100	96.248	Loxodonta_africana
MGP_CAROLIEiJ_G0020542	-	100	94.955	ENSMFAG00000033708	DGCR8	100	94.955	Macaca_fascicularis
MGP_CAROLIEiJ_G0020542	-	100	94.955	ENSMMUG00000020098	DGCR8	100	94.955	Macaca_mulatta
MGP_CAROLIEiJ_G0020542	-	100	95.084	ENSMNEG00000009733	DGCR8	100	95.084	Macaca_nemestrina
MGP_CAROLIEiJ_G0020542	-	100	95.084	ENSMLEG00000030324	DGCR8	100	95.084	Mandrillus_leucophaeus
MGP_CAROLIEiJ_G0020542	-	95	71.825	ENSMAMG00000020856	dgcr8	100	69.912	Mastacembelus_armatus
MGP_CAROLIEiJ_G0020542	-	95	72.775	ENSMZEG00005018646	dgcr8	100	70.588	Maylandia_zebra
MGP_CAROLIEiJ_G0020542	-	100	77.964	ENSMGAG00000001534	DGCR8	100	77.964	Meleagris_gallopavo
MGP_CAROLIEiJ_G0020542	-	100	98.706	ENSMAUG00000000517	-	100	98.706	Mesocricetus_auratus
MGP_CAROLIEiJ_G0020542	-	100	95.472	ENSMICG00000030145	DGCR8	100	95.472	Microcebus_murinus
MGP_CAROLIEiJ_G0020542	-	100	98.836	ENSMOCG00000014743	-	100	98.836	Microtus_ochrogaster
MGP_CAROLIEiJ_G0020542	-	95	73.622	ENSMMOG00000014823	dgcr8	100	71.518	Mola_mola
MGP_CAROLIEiJ_G0020542	-	100	83.012	ENSMODG00000010334	DGCR8	100	83.012	Monodelphis_domestica
MGP_CAROLIEiJ_G0020542	-	95	71.937	ENSMALG00000015163	dgcr8	99	70.229	Monopterus_albus
MGP_CAROLIEiJ_G0020542	-	100	99.741	ENSMUSG00000022718	Dgcr8	100	99.741	Mus_musculus
MGP_CAROLIEiJ_G0020542	-	100	100.000	MGP_PahariEiJ_G0016247	-	100	100.000	Mus_pahari
MGP_CAROLIEiJ_G0020542	-	100	96.248	MGP_SPRETEiJ_G0021437	-	100	96.248	Mus_spretus
MGP_CAROLIEiJ_G0020542	-	98	96.552	ENSMPUG00000004005	DGCR8	100	96.552	Mustela_putorius_furo
MGP_CAROLIEiJ_G0020542	-	100	93.402	ENSMLUG00000017533	DGCR8	100	93.402	Myotis_lucifugus
MGP_CAROLIEiJ_G0020542	-	100	97.801	ENSNGAG00000003283	-	100	97.801	Nannospalax_galili
MGP_CAROLIEiJ_G0020542	-	95	72.906	ENSNBRG00000002412	dgcr8	100	70.713	Neolamprologus_brichardi
MGP_CAROLIEiJ_G0020542	-	100	94.955	ENSNLEG00000005643	DGCR8	100	94.955	Nomascus_leucogenys
MGP_CAROLIEiJ_G0020542	-	100	74.031	ENSMEUG00000001041	DGCR8	100	74.031	Notamacropus_eugenii
MGP_CAROLIEiJ_G0020542	-	100	92.755	ENSOPRG00000008457	DGCR8	100	92.755	Ochotona_princeps
MGP_CAROLIEiJ_G0020542	-	100	95.990	ENSODEG00000016402	DGCR8	100	95.990	Octodon_degus
MGP_CAROLIEiJ_G0020542	-	95	73.901	ENSONIG00000011072	dgcr8	100	70.338	Oreochromis_niloticus
MGP_CAROLIEiJ_G0020542	-	100	94.049	ENSOCUG00000003612	DGCR8	100	94.049	Oryctolagus_cuniculus
MGP_CAROLIEiJ_G0020542	-	95	71.296	ENSORLG00000015160	dgcr8	99	69.221	Oryzias_latipes
MGP_CAROLIEiJ_G0020542	-	95	71.751	ENSORLG00020022168	dgcr8	99	69.654	Oryzias_latipes_hni
MGP_CAROLIEiJ_G0020542	-	95	71.788	ENSORLG00015012766	dgcr8	99	69.565	Oryzias_latipes_hsok
MGP_CAROLIEiJ_G0020542	-	95	70.526	ENSOMEG00000019137	dgcr8	100	67.925	Oryzias_melastigma
MGP_CAROLIEiJ_G0020542	-	100	95.472	ENSOGAG00000004851	DGCR8	100	95.472	Otolemur_garnettii
MGP_CAROLIEiJ_G0020542	-	100	87.339	ENSOARG00000018063	DGCR8	100	87.468	Ovis_aries
MGP_CAROLIEiJ_G0020542	-	100	95.213	ENSPPAG00000039507	DGCR8	100	95.213	Pan_paniscus
MGP_CAROLIEiJ_G0020542	-	100	95.860	ENSPPRG00000018958	DGCR8	100	95.860	Panthera_pardus
MGP_CAROLIEiJ_G0020542	-	100	95.860	ENSPTIG00000010980	DGCR8	100	95.860	Panthera_tigris_altaica
MGP_CAROLIEiJ_G0020542	-	100	95.213	ENSPTRG00000014073	DGCR8	100	95.213	Pan_troglodytes
MGP_CAROLIEiJ_G0020542	-	100	95.084	ENSPANG00000019987	DGCR8	100	95.084	Papio_anubis
MGP_CAROLIEiJ_G0020542	-	97	73.705	ENSPKIG00000010338	dgcr8	100	72.807	Paramormyrops_kingsleyae
MGP_CAROLIEiJ_G0020542	-	100	83.484	ENSPSIG00000002300	-	100	83.484	Pelodiscus_sinensis
MGP_CAROLIEiJ_G0020542	-	95	72.799	ENSPMGG00000021200	dgcr8	100	70.603	Periophthalmus_magnuspinnatus
MGP_CAROLIEiJ_G0020542	-	100	98.706	ENSPEMG00000018266	-	100	98.706	Peromyscus_maniculatus_bairdii
MGP_CAROLIEiJ_G0020542	-	100	83.204	ENSPCIG00000027728	DGCR8	100	83.204	Phascolarctos_cinereus
MGP_CAROLIEiJ_G0020542	-	95	71.186	ENSPFOG00000010796	dgcr8	99	69.647	Poecilia_formosa
MGP_CAROLIEiJ_G0020542	-	95	71.018	ENSPLAG00000002812	dgcr8	99	69.483	Poecilia_latipinna
MGP_CAROLIEiJ_G0020542	-	95	71.149	ENSPMEG00000024459	dgcr8	99	69.609	Poecilia_mexicana
MGP_CAROLIEiJ_G0020542	-	95	70.703	ENSPREG00000018877	dgcr8	100	68.991	Poecilia_reticulata
MGP_CAROLIEiJ_G0020542	-	100	95.213	ENSPPYG00000011591	DGCR8	100	95.213	Pongo_abelii
MGP_CAROLIEiJ_G0020542	-	100	90.944	ENSPCAG00000015976	DGCR8	100	90.944	Procavia_capensis
MGP_CAROLIEiJ_G0020542	-	100	95.602	ENSPCOG00000025377	DGCR8	100	95.602	Propithecus_coquereli
MGP_CAROLIEiJ_G0020542	-	100	85.640	ENSPVAG00000015694	DGCR8	100	85.640	Pteropus_vampyrus
MGP_CAROLIEiJ_G0020542	-	95	72.775	ENSPNYG00000004486	dgcr8	100	70.588	Pundamilia_nyererei
MGP_CAROLIEiJ_G0020542	-	95	74.118	ENSPNAG00000016504	dgcr8	100	72.174	Pygocentrus_nattereri
MGP_CAROLIEiJ_G0020542	-	100	98.965	ENSRNOG00000001886	Dgcr8	100	98.965	Rattus_norvegicus
MGP_CAROLIEiJ_G0020542	-	100	95.084	ENSRBIG00000015201	DGCR8	100	95.084	Rhinopithecus_bieti
MGP_CAROLIEiJ_G0020542	-	100	95.084	ENSRROG00000029948	DGCR8	100	95.084	Rhinopithecus_roxellana
MGP_CAROLIEiJ_G0020542	-	100	95.084	ENSSBOG00000022975	DGCR8	100	95.084	Saimiri_boliviensis_boliviensis
MGP_CAROLIEiJ_G0020542	-	100	83.204	ENSSHAG00000002274	DGCR8	100	83.204	Sarcophilus_harrisii
MGP_CAROLIEiJ_G0020542	-	95	75.532	ENSSFOG00015017499	dgcr8	100	73.704	Scleropages_formosus
MGP_CAROLIEiJ_G0020542	-	95	74.069	ENSSMAG00000019677	dgcr8	100	71.792	Scophthalmus_maximus
MGP_CAROLIEiJ_G0020542	-	95	73.684	ENSSDUG00000002478	dgcr8	100	71.447	Seriola_dumerili
MGP_CAROLIEiJ_G0020542	-	95	73.684	ENSSLDG00000015762	dgcr8	100	71.447	Seriola_lalandi_dorsalis
MGP_CAROLIEiJ_G0020542	-	100	94.825	ENSSARG00000009292	DGCR8	100	94.825	Sorex_araneus
MGP_CAROLIEiJ_G0020542	-	100	83.333	ENSSPUG00000014967	DGCR8	100	83.333	Sphenodon_punctatus
MGP_CAROLIEiJ_G0020542	-	95	73.587	ENSSPAG00000009666	dgcr8	100	71.178	Stegastes_partitus
MGP_CAROLIEiJ_G0020542	-	100	94.049	ENSSSCG00000010135	DGCR8	100	94.049	Sus_scrofa
MGP_CAROLIEiJ_G0020542	-	95	71.953	ENSTRUG00000013594	dgcr8	100	69.799	Takifugu_rubripes
MGP_CAROLIEiJ_G0020542	-	95	74.194	ENSTNIG00000016762	dgcr8	100	72.015	Tetraodon_nigroviridis
MGP_CAROLIEiJ_G0020542	-	100	78.655	ENSTBEG00000007196	DGCR8	100	79.043	Tupaia_belangeri
MGP_CAROLIEiJ_G0020542	-	100	89.521	ENSTTRG00000008121	DGCR8	100	89.521	Tursiops_truncatus
MGP_CAROLIEiJ_G0020542	-	100	96.636	ENSUAMG00000010847	DGCR8	100	96.636	Ursus_americanus
MGP_CAROLIEiJ_G0020542	-	100	96.636	ENSUMAG00000007398	DGCR8	100	96.636	Ursus_maritimus
MGP_CAROLIEiJ_G0020542	-	100	96.766	ENSVVUG00000025413	DGCR8	100	96.766	Vulpes_vulpes
MGP_CAROLIEiJ_G0020542	-	95	79.376	ENSXETG00000006320	dgcr8	100	76.577	Xenopus_tropicalis
MGP_CAROLIEiJ_G0020542	-	95	70.596	ENSXCOG00000015141	dgcr8	99	69.086	Xiphophorus_couchianus
MGP_CAROLIEiJ_G0020542	-	95	70.763	ENSXMAG00000002426	dgcr8	100	68.812	Xiphophorus_maculatus