EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_CAROLIEiJ_G0020728 (Gene tree)
Gene ID: 110311544
Gene Symbol: Rabl3
Alias: 4930553C05Rik
Full Name: RAB%2C member of RAS oncogene family like 3
Gene Type: protein_coding
Species: Mus_caroli
Status: putative
Strand: Plus strand
Length: 33656 bases
Position: chr16:34602425-34636080
Accession: 110311544
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CAROLIEiJ_P0041540	MMR_HSR1	PF01926.23	8.4e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CAROLIEiJ_T0041540	-	1999	XM_021184914	MGP_CAROLIEiJ_P0041540	236 (aa)	XP_021040573	UPI000002200D
MGP_CAROLIEiJ_T0041541	-	1928	-	MGP_CAROLIEiJ_P0041541	129 (aa)	-	UPI00000E5F20
MGP_CAROLIEiJ_T0041542	-	4327	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0041543	-	653	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_CAROLIEiJ_G0020728's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CAROLIEiJ_G0020728's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_CAROLIEiJ_G0020728	Rabl3	100	95.349	ENSG00000144840	RABL3	100	95.349	Homo_sapiens
MGP_CAROLIEiJ_G0020728	Rabl3	100	92.248	ENSAPOG00000024479	rabl3	100	83.544	Acanthochromis_polyacanthus
MGP_CAROLIEiJ_G0020728	Rabl3	100	96.899	ENSAMEG00000004809	RABL3	100	94.068	Ailuropoda_melanoleuca
MGP_CAROLIEiJ_G0020728	Rabl3	100	90.698	ENSACIG00000014343	rabl3	100	80.508	Amphilophus_citrinellus
MGP_CAROLIEiJ_G0020728	Rabl3	100	92.248	ENSAOCG00000011851	rabl3	100	83.544	Amphiprion_ocellaris
MGP_CAROLIEiJ_G0020728	Rabl3	99	92.188	ENSAPEG00000011214	rabl3	100	83.544	Amphiprion_percula
MGP_CAROLIEiJ_G0020728	Rabl3	100	93.023	ENSATEG00000003503	rabl3	95	89.109	Anabas_testudineus
MGP_CAROLIEiJ_G0020728	Rabl3	100	92.248	ENSACAG00000011313	-	99	87.179	Anolis_carolinensis
MGP_CAROLIEiJ_G0020728	Rabl3	100	96.899	ENSANAG00000027278	RABL3	100	94.068	Aotus_nancymaae
MGP_CAROLIEiJ_G0020728	Rabl3	100	90.698	ENSACLG00000009820	rabl3	100	83.051	Astatotilapia_calliptera
MGP_CAROLIEiJ_G0020728	Rabl3	100	92.248	ENSAMXG00000038716	rabl3	100	83.898	Astyanax_mexicanus
MGP_CAROLIEiJ_G0020728	Rabl3	100	96.899	ENSBTAG00000015898	RABL3	100	93.644	Bos_taurus
MGP_CAROLIEiJ_G0020728	Rabl3	100	96.899	ENSCJAG00000008611	RABL3	100	94.068	Callithrix_jacchus
MGP_CAROLIEiJ_G0020728	Rabl3	100	96.899	ENSCAFG00000011292	RABL3	89	94.492	Canis_familiaris
MGP_CAROLIEiJ_G0020728	Rabl3	100	96.899	ENSCAFG00020006397	RABL3	100	94.492	Canis_lupus_dingo
MGP_CAROLIEiJ_G0020728	Rabl3	100	96.899	ENSCHIG00000017365	RABL3	100	93.644	Capra_hircus
MGP_CAROLIEiJ_G0020728	Rabl3	100	96.124	ENSCPOG00000009645	RABL3	100	91.949	Cavia_porcellus
MGP_CAROLIEiJ_G0020728	Rabl3	100	95.349	ENSCATG00000032561	RABL3	100	92.797	Cercocebus_atys
MGP_CAROLIEiJ_G0020728	Rabl3	100	96.124	ENSCLAG00000010855	RABL3	100	91.525	Chinchilla_lanigera
MGP_CAROLIEiJ_G0020728	Rabl3	98	95.238	ENSCSAG00000007155	RABL3	100	92.704	Chlorocebus_sabaeus
MGP_CAROLIEiJ_G0020728	Rabl3	100	93.798	ENSCPBG00000001999	RABL3	100	91.525	Chrysemys_picta_bellii
MGP_CAROLIEiJ_G0020728	Rabl3	100	95.349	ENSCANG00000031684	RABL3	100	92.797	Colobus_angolensis_palliatus
MGP_CAROLIEiJ_G0020728	Rabl3	100	99.225	ENSCGRG00001021537	Rabl3	100	97.458	Cricetulus_griseus_chok1gshd
MGP_CAROLIEiJ_G0020728	Rabl3	100	99.225	ENSCGRG00000002114	Rabl3	100	97.458	Cricetulus_griseus_crigri
MGP_CAROLIEiJ_G0020728	Rabl3	100	92.248	ENSCSEG00000014982	rabl3	100	73.305	Cynoglossus_semilaevis
MGP_CAROLIEiJ_G0020728	Rabl3	100	89.147	ENSCVAG00000009904	rabl3	100	70.339	Cyprinodon_variegatus
MGP_CAROLIEiJ_G0020728	Rabl3	100	89.922	ENSDARG00000040959	rabl3	93	89.844	Danio_rerio
MGP_CAROLIEiJ_G0020728	Rabl3	100	94.574	ENSDNOG00000008174	RABL3	100	92.373	Dasypus_novemcinctus
MGP_CAROLIEiJ_G0020728	Rabl3	100	94.574	ENSETEG00000010206	RABL3	100	93.644	Echinops_telfairi
MGP_CAROLIEiJ_G0020728	Rabl3	100	96.899	ENSECAG00000023059	RABL3	100	94.068	Equus_caballus
MGP_CAROLIEiJ_G0020728	Rabl3	99	94.531	ENSEEUG00000002897	RABL3	100	86.441	Erinaceus_europaeus
MGP_CAROLIEiJ_G0020728	Rabl3	100	91.473	ENSELUG00000014758	rabl3	100	81.780	Esox_lucius
MGP_CAROLIEiJ_G0020728	Rabl3	100	96.899	ENSFCAG00000031879	RABL3	100	85.169	Felis_catus
MGP_CAROLIEiJ_G0020728	Rabl3	100	93.023	ENSFALG00000005296	RABL3	100	90.254	Ficedula_albicollis
MGP_CAROLIEiJ_G0020728	Rabl3	100	95.349	ENSFDAG00000000307	RABL3	100	91.949	Fukomys_damarensis
MGP_CAROLIEiJ_G0020728	Rabl3	100	89.922	ENSFHEG00000011273	rabl3	100	82.203	Fundulus_heteroclitus
MGP_CAROLIEiJ_G0020728	Rabl3	100	89.147	ENSGMOG00000007845	rabl3	100	81.356	Gadus_morhua
MGP_CAROLIEiJ_G0020728	Rabl3	100	93.798	ENSGALG00000014949	RABL3	100	91.525	Gallus_gallus
MGP_CAROLIEiJ_G0020728	Rabl3	100	86.822	ENSGAFG00000015953	rabl3	100	80.932	Gambusia_affinis
MGP_CAROLIEiJ_G0020728	Rabl3	100	89.147	ENSGACG00000007387	rabl3	100	89.147	Gasterosteus_aculeatus
MGP_CAROLIEiJ_G0020728	Rabl3	100	94.574	ENSGAGG00000003677	RABL3	100	91.525	Gopherus_agassizii
MGP_CAROLIEiJ_G0020728	Rabl3	100	95.349	ENSGGOG00000006059	RABL3	100	92.373	Gorilla_gorilla
MGP_CAROLIEiJ_G0020728	Rabl3	100	91.473	ENSHBUG00000019478	rabl3	93	83.475	Haplochromis_burtoni
MGP_CAROLIEiJ_G0020728	Rabl3	100	94.574	ENSHGLG00000014491	RABL3	100	91.102	Heterocephalus_glaber_female
MGP_CAROLIEiJ_G0020728	Rabl3	100	94.574	ENSHGLG00100004866	RABL3	100	91.102	Heterocephalus_glaber_male
MGP_CAROLIEiJ_G0020728	Rabl3	100	92.248	ENSHCOG00000019245	rabl3	91	88.764	Hippocampus_comes
MGP_CAROLIEiJ_G0020728	Rabl3	100	93.023	ENSIPUG00000012657	rabl3	100	84.746	Ictalurus_punctatus
MGP_CAROLIEiJ_G0020728	Rabl3	100	96.124	ENSSTOG00000019452	RABL3	100	91.949	Ictidomys_tridecemlineatus
MGP_CAROLIEiJ_G0020728	Rabl3	100	95.349	ENSJJAG00000023553	Rabl3	100	83.475	Jaculus_jaculus
MGP_CAROLIEiJ_G0020728	Rabl3	100	84.496	ENSKMAG00000015464	rabl3	100	77.542	Kryptolebias_marmoratus
MGP_CAROLIEiJ_G0020728	Rabl3	100	91.473	ENSLBEG00000010627	-	100	83.544	Labrus_bergylta
MGP_CAROLIEiJ_G0020728	Rabl3	100	91.473	ENSLBEG00000020595	rabl3	100	83.544	Labrus_bergylta
MGP_CAROLIEiJ_G0020728	Rabl3	100	90.698	ENSLOCG00000006265	rabl3	100	87.712	Lepisosteus_oculatus
MGP_CAROLIEiJ_G0020728	Rabl3	100	96.124	ENSLAFG00000003711	RABL3	100	91.949	Loxodonta_africana
MGP_CAROLIEiJ_G0020728	Rabl3	100	95.349	ENSMFAG00000031923	RABL3	100	92.797	Macaca_fascicularis
MGP_CAROLIEiJ_G0020728	Rabl3	100	95.349	ENSMMUG00000001594	RABL3	100	83.475	Macaca_mulatta
MGP_CAROLIEiJ_G0020728	Rabl3	100	95.349	ENSMNEG00000043980	RABL3	100	92.797	Macaca_nemestrina
MGP_CAROLIEiJ_G0020728	Rabl3	100	95.349	ENSMLEG00000028177	RABL3	100	92.797	Mandrillus_leucophaeus
MGP_CAROLIEiJ_G0020728	Rabl3	100	91.473	ENSMAMG00000015155	rabl3	100	83.475	Mastacembelus_armatus
MGP_CAROLIEiJ_G0020728	Rabl3	100	90.698	ENSMZEG00005002607	rabl3	100	83.051	Maylandia_zebra
MGP_CAROLIEiJ_G0020728	Rabl3	100	99.225	ENSMAUG00000013022	Rabl3	100	97.458	Mesocricetus_auratus
MGP_CAROLIEiJ_G0020728	Rabl3	100	96.124	ENSMICG00000049288	RABL3	100	94.068	Microcebus_murinus
MGP_CAROLIEiJ_G0020728	Rabl3	100	97.674	ENSMOCG00000015237	Rabl3	100	96.610	Microtus_ochrogaster
MGP_CAROLIEiJ_G0020728	Rabl3	100	92.248	ENSMMOG00000005628	rabl3	100	79.661	Mola_mola
MGP_CAROLIEiJ_G0020728	Rabl3	100	92.248	ENSMODG00000018232	RABL3	100	88.559	Monodelphis_domestica
MGP_CAROLIEiJ_G0020728	Rabl3	100	89.147	ENSMALG00000018837	rabl3	100	78.243	Monopterus_albus
MGP_CAROLIEiJ_G0020728	Rabl3	100	100.000	ENSMUSG00000022827	Rabl3	100	100.000	Mus_musculus
MGP_CAROLIEiJ_G0020728	Rabl3	100	100.000	MGP_PahariEiJ_G0016429	Rabl3	100	100.000	Mus_pahari
MGP_CAROLIEiJ_G0020728	Rabl3	100	100.000	MGP_SPRETEiJ_G0021628	Rabl3	100	100.000	Mus_spretus
MGP_CAROLIEiJ_G0020728	Rabl3	100	96.899	ENSMPUG00000008257	RABL3	89	94.492	Mustela_putorius_furo
MGP_CAROLIEiJ_G0020728	Rabl3	100	93.798	ENSMLUG00000014113	RABL3	100	90.254	Myotis_lucifugus
MGP_CAROLIEiJ_G0020728	Rabl3	100	95.349	ENSNGAG00000001939	Rabl3	100	84.483	Nannospalax_galili
MGP_CAROLIEiJ_G0020728	Rabl3	100	92.248	ENSNBRG00000012423	rabl3	92	87.037	Neolamprologus_brichardi
MGP_CAROLIEiJ_G0020728	Rabl3	100	95.349	ENSNLEG00000031723	RABL3	100	92.797	Nomascus_leucogenys
MGP_CAROLIEiJ_G0020728	Rabl3	100	93.023	ENSMEUG00000006606	RABL3	100	90.254	Notamacropus_eugenii
MGP_CAROLIEiJ_G0020728	Rabl3	100	95.349	ENSODEG00000004758	-	100	90.678	Octodon_degus
MGP_CAROLIEiJ_G0020728	Rabl3	100	92.248	ENSONIG00000004281	rabl3	100	83.898	Oreochromis_niloticus
MGP_CAROLIEiJ_G0020728	Rabl3	98	92.126	ENSOANG00000003928	RABL3	99	88.462	Ornithorhynchus_anatinus
MGP_CAROLIEiJ_G0020728	Rabl3	100	92.248	ENSORLG00000020457	rabl3	100	82.627	Oryzias_latipes
MGP_CAROLIEiJ_G0020728	Rabl3	100	92.248	ENSORLG00020008991	rabl3	100	79.661	Oryzias_latipes_hni
MGP_CAROLIEiJ_G0020728	Rabl3	100	92.248	ENSORLG00015005649	rabl3	88	82.627	Oryzias_latipes_hsok
MGP_CAROLIEiJ_G0020728	Rabl3	100	92.248	ENSOMEG00000015066	rabl3	100	83.051	Oryzias_melastigma
MGP_CAROLIEiJ_G0020728	Rabl3	100	96.124	ENSOGAG00000005961	RABL3	100	94.068	Otolemur_garnettii
MGP_CAROLIEiJ_G0020728	Rabl3	100	96.899	ENSOARG00000019939	RABL3	100	93.644	Ovis_aries
MGP_CAROLIEiJ_G0020728	Rabl3	94	91.441	ENSPPAG00000036997	RABL3	87	91.441	Pan_paniscus
MGP_CAROLIEiJ_G0020728	Rabl3	100	96.899	ENSPPRG00000016325	RABL3	100	94.492	Panthera_pardus
MGP_CAROLIEiJ_G0020728	Rabl3	100	96.899	ENSPTIG00000018021	RABL3	100	94.492	Panthera_tigris_altaica
MGP_CAROLIEiJ_G0020728	Rabl3	100	95.349	ENSPTRG00000015272	RABL3	100	92.373	Pan_troglodytes
MGP_CAROLIEiJ_G0020728	Rabl3	100	95.349	ENSPANG00000001339	RABL3	100	92.797	Papio_anubis
MGP_CAROLIEiJ_G0020728	Rabl3	100	92.248	ENSPKIG00000007818	rabl3	100	84.322	Paramormyrops_kingsleyae
MGP_CAROLIEiJ_G0020728	Rabl3	100	93.798	ENSPSIG00000011358	RABL3	100	90.678	Pelodiscus_sinensis
MGP_CAROLIEiJ_G0020728	Rabl3	100	93.798	ENSPMGG00000015794	rabl3	100	80.508	Periophthalmus_magnuspinnatus
MGP_CAROLIEiJ_G0020728	Rabl3	100	98.450	ENSPEMG00000016913	Rabl3	100	98.305	Peromyscus_maniculatus_bairdii
MGP_CAROLIEiJ_G0020728	Rabl3	100	93.023	ENSPCIG00000018922	RABL3	100	90.678	Phascolarctos_cinereus
MGP_CAROLIEiJ_G0020728	Rabl3	100	88.372	ENSPFOG00000008586	rabl3	100	81.356	Poecilia_formosa
MGP_CAROLIEiJ_G0020728	Rabl3	100	88.372	ENSPLAG00000014482	rabl3	100	81.356	Poecilia_latipinna
MGP_CAROLIEiJ_G0020728	Rabl3	100	88.372	ENSPMEG00000002295	rabl3	100	81.356	Poecilia_mexicana
MGP_CAROLIEiJ_G0020728	Rabl3	100	88.372	ENSPREG00000014815	rabl3	100	81.356	Poecilia_reticulata
MGP_CAROLIEiJ_G0020728	Rabl3	100	95.349	ENSPPYG00000013501	RABL3	100	92.797	Pongo_abelii
MGP_CAROLIEiJ_G0020728	Rabl3	100	96.899	ENSPCOG00000022230	RABL3	100	94.492	Propithecus_coquereli
MGP_CAROLIEiJ_G0020728	Rabl3	100	94.574	ENSPVAG00000010013	RABL3	100	91.525	Pteropus_vampyrus
MGP_CAROLIEiJ_G0020728	Rabl3	100	91.473	ENSPNYG00000006659	rabl3	100	83.475	Pundamilia_nyererei
MGP_CAROLIEiJ_G0020728	Rabl3	100	93.023	ENSPNAG00000000748	rabl3	100	84.322	Pygocentrus_nattereri
MGP_CAROLIEiJ_G0020728	Rabl3	100	100.000	ENSRNOG00000026085	Rabl3	100	99.153	Rattus_norvegicus
MGP_CAROLIEiJ_G0020728	Rabl3	100	95.349	ENSRBIG00000040941	RABL3	100	92.797	Rhinopithecus_bieti
MGP_CAROLIEiJ_G0020728	Rabl3	100	95.349	ENSRROG00000043745	RABL3	100	92.797	Rhinopithecus_roxellana
MGP_CAROLIEiJ_G0020728	Rabl3	100	96.899	ENSSBOG00000004022	RABL3	100	94.068	Saimiri_boliviensis_boliviensis
MGP_CAROLIEiJ_G0020728	Rabl3	100	93.023	ENSSHAG00000012233	RABL3	100	90.678	Sarcophilus_harrisii
MGP_CAROLIEiJ_G0020728	Rabl3	100	93.023	ENSSFOG00015010171	rabl3	100	85.593	Scleropages_formosus
MGP_CAROLIEiJ_G0020728	Rabl3	100	90.698	ENSSMAG00000002403	rabl3	100	82.278	Scophthalmus_maximus
MGP_CAROLIEiJ_G0020728	Rabl3	100	92.248	ENSSDUG00000012078	rabl3	100	83.898	Seriola_dumerili
MGP_CAROLIEiJ_G0020728	Rabl3	100	93.023	ENSSLDG00000021899	rabl3	100	84.322	Seriola_lalandi_dorsalis
MGP_CAROLIEiJ_G0020728	Rabl3	100	96.899	ENSSARG00000008316	RABL3	100	94.492	Sorex_araneus
MGP_CAROLIEiJ_G0020728	Rabl3	100	94.574	ENSSPUG00000017490	RABL3	100	91.102	Sphenodon_punctatus
MGP_CAROLIEiJ_G0020728	Rabl3	100	91.473	ENSSPAG00000011642	rabl3	100	83.475	Stegastes_partitus
MGP_CAROLIEiJ_G0020728	Rabl3	100	96.899	ENSSSCG00000035258	RABL3	100	94.068	Sus_scrofa
MGP_CAROLIEiJ_G0020728	Rabl3	100	93.023	ENSTGUG00000013374	RABL3	100	90.678	Taeniopygia_guttata
MGP_CAROLIEiJ_G0020728	Rabl3	100	90.698	ENSTRUG00000007846	RABL3	100	91.406	Takifugu_rubripes
MGP_CAROLIEiJ_G0020728	Rabl3	100	96.124	ENSTBEG00000005153	RABL3	100	79.661	Tupaia_belangeri
MGP_CAROLIEiJ_G0020728	Rabl3	100	96.899	ENSUAMG00000005299	RABL3	100	94.068	Ursus_americanus
MGP_CAROLIEiJ_G0020728	Rabl3	100	96.124	ENSUMAG00000025256	RABL3	89	93.644	Ursus_maritimus
MGP_CAROLIEiJ_G0020728	Rabl3	100	96.899	ENSVPAG00000003776	RABL3	100	94.068	Vicugna_pacos
MGP_CAROLIEiJ_G0020728	Rabl3	100	96.899	ENSVVUG00000022300	RABL3	89	94.492	Vulpes_vulpes
MGP_CAROLIEiJ_G0020728	Rabl3	100	88.372	ENSXMAG00000003244	rabl3	100	81.356	Xiphophorus_maculatus