EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_CAROLIEiJ_G0020812 (Gene tree)
Gene ID: 110311630
Gene Symbol: Trmt10c
Alias: 1300018J16Rik|D16Ertd454e|Rg9mtd1
Full Name: tRNA methyltransferase 10C%2C mitochondrial RNase P subunit
Gene Type: protein_coding
Species: Mus_caroli
Status: putative
Strand: Minus strand
Length: 5227 bases
Position: chr16:52483294-52488520
Accession: 110311630
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CAROLIEiJ_P0041879	tRNA_m1G_MT	PF01746.21	3.6e-43	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CAROLIEiJ_T0041879	-	2967	-	MGP_CAROLIEiJ_P0041879	414 (aa)	XP_021040711	UPI000A318855

Gene Model

Click here to download MGP_CAROLIEiJ_G0020812's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CAROLIEiJ_G0020812's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_CAROLIEiJ_G0020812	Trmt10c	96	76.942	ENSG00000174173	TRMT10C	99	76.942	Homo_sapiens
MGP_CAROLIEiJ_G0020812	Trmt10c	57	30.417	ENSG00000165275	TRMT10B	84	31.183	Homo_sapiens
MGP_CAROLIEiJ_G0020812	Trmt10c	55	30.172	ENSAPOG00000007362	trmt10b	54	32.609	Acanthochromis_polyacanthus
MGP_CAROLIEiJ_G0020812	Trmt10c	54	56.277	ENSAPOG00000003883	trmt10c	74	51.938	Acanthochromis_polyacanthus
MGP_CAROLIEiJ_G0020812	Trmt10c	98	75.743	ENSAMEG00000019657	TRMT10C	98	75.743	Ailuropoda_melanoleuca
MGP_CAROLIEiJ_G0020812	Trmt10c	54	30.837	ENSAOCG00000001205	trmt10b	61	33.152	Amphiprion_ocellaris
MGP_CAROLIEiJ_G0020812	Trmt10c	56	56.223	ENSAOCG00000005855	trmt10c	70	54.321	Amphiprion_ocellaris
MGP_CAROLIEiJ_G0020812	Trmt10c	56	56.652	ENSAPEG00000021992	trmt10c	70	54.733	Amphiprion_percula
MGP_CAROLIEiJ_G0020812	Trmt10c	89	49.600	ENSATEG00000012576	trmt10c	81	54.754	Anabas_testudineus
MGP_CAROLIEiJ_G0020812	Trmt10c	80	54.079	ENSAPLG00000011561	TRMT10C	83	54.079	Anas_platyrhynchos
MGP_CAROLIEiJ_G0020812	Trmt10c	81	54.971	ENSACAG00000011903	TRMT10C	78	54.971	Anolis_carolinensis
MGP_CAROLIEiJ_G0020812	Trmt10c	60	30.078	ENSACLG00000013678	trmt10b	64	32.020	Astatotilapia_calliptera
MGP_CAROLIEiJ_G0020812	Trmt10c	97	44.794	ENSACLG00000024269	trmt10c	97	45.521	Astatotilapia_calliptera
MGP_CAROLIEiJ_G0020812	Trmt10c	83	49.003	ENSAMXG00000014749	trmt10c	83	47.009	Astyanax_mexicanus
MGP_CAROLIEiJ_G0020812	Trmt10c	99	74.572	ENSBTAG00000024027	TRMT10C	97	74.572	Bos_taurus
MGP_CAROLIEiJ_G0020812	Trmt10c	100	71.566	ENSCAFG00000031607	TRMT10C	98	71.566	Canis_familiaris
MGP_CAROLIEiJ_G0020812	Trmt10c	100	71.566	ENSCAFG00020008862	TRMT10C	98	71.566	Canis_lupus_dingo
MGP_CAROLIEiJ_G0020812	Trmt10c	99	74.572	ENSCHIG00000021446	TRMT10C	96	74.572	Capra_hircus
MGP_CAROLIEiJ_G0020812	Trmt10c	57	30.000	ENSCATG00000032196	TRMT10B	84	30.645	Cercocebus_atys
MGP_CAROLIEiJ_G0020812	Trmt10c	99	73.608	ENSCLAG00000017738	TRMT10C	98	73.608	Chinchilla_lanigera
MGP_CAROLIEiJ_G0020812	Trmt10c	96	78.947	ENSCSAG00000018722	TRMT10C	99	78.947	Chlorocebus_sabaeus
MGP_CAROLIEiJ_G0020812	Trmt10c	57	30.000	ENSCSAG00000010828	TRMT10B	58	30.435	Chlorocebus_sabaeus
MGP_CAROLIEiJ_G0020812	Trmt10c	92	74.869	ENSCHOG00000010108	TRMT10C	98	75.393	Choloepus_hoffmanni
MGP_CAROLIEiJ_G0020812	Trmt10c	100	78.313	ENSCGRG00001006603	Trmt10c	100	78.313	Cricetulus_griseus_chok1gshd
MGP_CAROLIEiJ_G0020812	Trmt10c	100	78.313	ENSCGRG00000019728	Trmt10c	100	78.313	Cricetulus_griseus_crigri
MGP_CAROLIEiJ_G0020812	Trmt10c	88	45.220	ENSCSEG00000006163	trmt10c	77	46.134	Cynoglossus_semilaevis
MGP_CAROLIEiJ_G0020812	Trmt10c	82	47.658	ENSCVAG00000013751	trmt10c	72	46.832	Cyprinodon_variegatus
MGP_CAROLIEiJ_G0020812	Trmt10c	50	33.488	ENSCVAG00000014204	trmt10b	64	33.488	Cyprinodon_variegatus
MGP_CAROLIEiJ_G0020812	Trmt10c	81	48.837	ENSDARG00000041575	trmt10c	77	56.466	Danio_rerio
MGP_CAROLIEiJ_G0020812	Trmt10c	54	30.702	ENSDARG00000060176	trmt10b	66	31.068	Danio_rerio
MGP_CAROLIEiJ_G0020812	Trmt10c	100	70.531	ENSDNOG00000012650	TRMT10C	99	70.531	Dasypus_novemcinctus
MGP_CAROLIEiJ_G0020812	Trmt10c	99	75.061	ENSDORG00000027529	Trmt10c	100	74.396	Dipodomys_ordii
MGP_CAROLIEiJ_G0020812	Trmt10c	57	30.417	ENSDORG00000014365	Trmt10b	58	31.522	Dipodomys_ordii
MGP_CAROLIEiJ_G0020812	Trmt10c	74	35.826	FBgn0034351	rswl	71	33.436	Drosophila_melanogaster
MGP_CAROLIEiJ_G0020812	Trmt10c	77	34.591	ENSEBUG00000015332	trmt10c	75	33.648	Eptatretus_burgeri
MGP_CAROLIEiJ_G0020812	Trmt10c	100	79.036	ENSEASG00005011186	TRMT10C	99	79.036	Equus_asinus_asinus
MGP_CAROLIEiJ_G0020812	Trmt10c	100	79.277	ENSECAG00000001533	TRMT10C	99	79.277	Equus_caballus
MGP_CAROLIEiJ_G0020812	Trmt10c	96	71.322	ENSEEUG00000004696	TRMT10C	99	68.828	Erinaceus_europaeus
MGP_CAROLIEiJ_G0020812	Trmt10c	57	30.417	ENSEEUG00000000259	TRMT10B	67	30.045	Erinaceus_europaeus
MGP_CAROLIEiJ_G0020812	Trmt10c	85	51.099	ENSELUG00000002553	trmt10c	85	50.275	Esox_lucius
MGP_CAROLIEiJ_G0020812	Trmt10c	98	75.980	ENSFCAG00000003430	TRMT10C	96	75.980	Felis_catus
MGP_CAROLIEiJ_G0020812	Trmt10c	86	53.352	ENSFALG00000014236	TRMT10C	88	51.187	Ficedula_albicollis
MGP_CAROLIEiJ_G0020812	Trmt10c	99	73.058	ENSFDAG00000001576	TRMT10C	96	73.058	Fukomys_damarensis
MGP_CAROLIEiJ_G0020812	Trmt10c	80	50.000	ENSFHEG00000015379	trmt10c	71	50.000	Fundulus_heteroclitus
MGP_CAROLIEiJ_G0020812	Trmt10c	79	50.000	ENSGMOG00000008573	trmt10c	95	50.000	Gadus_morhua
MGP_CAROLIEiJ_G0020812	Trmt10c	86	51.366	ENSGALG00000015328	TRMT10C	87	50.136	Gallus_gallus
MGP_CAROLIEiJ_G0020812	Trmt10c	52	60.185	ENSGAFG00000012256	trmt10c	69	60.185	Gambusia_affinis
MGP_CAROLIEiJ_G0020812	Trmt10c	92	47.938	ENSGACG00000015281	trmt10c	95	47.938	Gasterosteus_aculeatus
MGP_CAROLIEiJ_G0020812	Trmt10c	84	55.874	ENSGAGG00000022825	TRMT10C	82	58.571	Gopherus_agassizii
MGP_CAROLIEiJ_G0020812	Trmt10c	96	76.692	ENSGGOG00000006484	TRMT10C	99	76.692	Gorilla_gorilla
MGP_CAROLIEiJ_G0020812	Trmt10c	52	55.814	ENSHBUG00000000010	trmt10c	72	52.966	Haplochromis_burtoni
MGP_CAROLIEiJ_G0020812	Trmt10c	98	73.039	ENSHGLG00000019767	TRMT10C	98	71.569	Heterocephalus_glaber_female
MGP_CAROLIEiJ_G0020812	Trmt10c	98	73.039	ENSHGLG00100020191	TRMT10C	98	71.569	Heterocephalus_glaber_male
MGP_CAROLIEiJ_G0020812	Trmt10c	50	58.654	ENSHCOG00000003493	trmt10c	78	56.744	Hippocampus_comes
MGP_CAROLIEiJ_G0020812	Trmt10c	78	52.339	ENSIPUG00000010010	trmt10c	70	51.453	Ictalurus_punctatus
MGP_CAROLIEiJ_G0020812	Trmt10c	58	30.800	ENSIPUG00000008246	trmt10b	78	31.148	Ictalurus_punctatus
MGP_CAROLIEiJ_G0020812	Trmt10c	98	77.641	ENSSTOG00000012199	TRMT10C	97	77.641	Ictidomys_tridecemlineatus
MGP_CAROLIEiJ_G0020812	Trmt10c	79	50.893	ENSKMAG00000022027	trmt10c	78	50.148	Kryptolebias_marmoratus
MGP_CAROLIEiJ_G0020812	Trmt10c	84	46.505	ENSLBEG00000013143	trmt10c	75	47.439	Labrus_bergylta
MGP_CAROLIEiJ_G0020812	Trmt10c	77	56.522	ENSLACG00000002036	TRMT10C	84	57.099	Latimeria_chalumnae
MGP_CAROLIEiJ_G0020812	Trmt10c	88	50.928	ENSLOCG00000017802	trmt10c	85	49.227	Lepisosteus_oculatus
MGP_CAROLIEiJ_G0020812	Trmt10c	100	75.663	ENSLAFG00000009677	TRMT10C	100	75.663	Loxodonta_africana
MGP_CAROLIEiJ_G0020812	Trmt10c	57	30.000	ENSMFAG00000032455	TRMT10B	84	30.645	Macaca_fascicularis
MGP_CAROLIEiJ_G0020812	Trmt10c	99	78.293	ENSMMUG00000017780	TRMT10C	97	78.293	Macaca_mulatta
MGP_CAROLIEiJ_G0020812	Trmt10c	57	30.000	ENSMMUG00000008662	TRMT10B	66	31.847	Macaca_mulatta
MGP_CAROLIEiJ_G0020812	Trmt10c	57	30.000	ENSMNEG00000033400	TRMT10B	84	30.645	Macaca_nemestrina
MGP_CAROLIEiJ_G0020812	Trmt10c	57	30.000	ENSMLEG00000035135	TRMT10B	84	30.645	Mandrillus_leucophaeus
MGP_CAROLIEiJ_G0020812	Trmt10c	53	55.656	ENSMAMG00000003124	trmt10c	66	55.656	Mastacembelus_armatus
MGP_CAROLIEiJ_G0020812	Trmt10c	52	55.814	ENSMZEG00005000671	trmt10c	65	55.814	Maylandia_zebra
MGP_CAROLIEiJ_G0020812	Trmt10c	56	30.380	ENSMZEG00005020927	trmt10b	59	32.609	Maylandia_zebra
MGP_CAROLIEiJ_G0020812	Trmt10c	58	56.250	ENSMGAG00000014375	TRMT10C	89	57.576	Meleagris_gallopavo
MGP_CAROLIEiJ_G0020812	Trmt10c	100	82.367	ENSMAUG00000009904	Trmt10c	100	82.367	Mesocricetus_auratus
MGP_CAROLIEiJ_G0020812	Trmt10c	100	82.410	ENSMOCG00000020572	Trmt10c	100	82.410	Microtus_ochrogaster
MGP_CAROLIEiJ_G0020812	Trmt10c	58	52.675	ENSMMOG00000018106	trmt10c	67	54.077	Mola_mola
MGP_CAROLIEiJ_G0020812	Trmt10c	99	55.797	ENSMODG00000025175	TRMT10C	98	55.797	Monodelphis_domestica
MGP_CAROLIEiJ_G0020812	Trmt10c	86	45.526	ENSMALG00000016236	trmt10c	77	45.910	Monopterus_albus
MGP_CAROLIEiJ_G0020812	Trmt10c	100	98.309	ENSMUSG00000044763	Trmt10c	100	98.309	Mus_musculus
MGP_CAROLIEiJ_G0020812	Trmt10c	100	94.686	MGP_PahariEiJ_G0016512	Trmt10c	100	94.686	Mus_pahari
MGP_CAROLIEiJ_G0020812	Trmt10c	100	99.034	MGP_SPRETEiJ_G0021712	Trmt10c	100	99.034	Mus_spretus
MGP_CAROLIEiJ_G0020812	Trmt10c	98	76.413	ENSMPUG00000019979	TRMT10C	96	76.413	Mustela_putorius_furo
MGP_CAROLIEiJ_G0020812	Trmt10c	99	74.515	ENSMLUG00000030097	-	98	74.515	Myotis_lucifugus
MGP_CAROLIEiJ_G0020812	Trmt10c	100	74.940	ENSMLUG00000028638	-	100	74.940	Myotis_lucifugus
MGP_CAROLIEiJ_G0020812	Trmt10c	100	80.000	ENSNGAG00000022215	Trmt10c	100	80.000	Nannospalax_galili
MGP_CAROLIEiJ_G0020812	Trmt10c	50	57.692	ENSNBRG00000017903	trmt10c	87	54.585	Neolamprologus_brichardi
MGP_CAROLIEiJ_G0020812	Trmt10c	57	30.000	ENSNLEG00000003542	TRMT10B	84	30.645	Nomascus_leucogenys
MGP_CAROLIEiJ_G0020812	Trmt10c	96	76.441	ENSOPRG00000007388	TRMT10C	99	76.441	Ochotona_princeps
MGP_CAROLIEiJ_G0020812	Trmt10c	80	48.991	ENSONIG00000003128	trmt10c	91	49.854	Oreochromis_niloticus
MGP_CAROLIEiJ_G0020812	Trmt10c	89	52.910	ENSOANG00000007508	TRMT10C	100	54.233	Ornithorhynchus_anatinus
MGP_CAROLIEiJ_G0020812	Trmt10c	99	74.817	ENSOCUG00000011103	TRMT10C	96	74.817	Oryctolagus_cuniculus
MGP_CAROLIEiJ_G0020812	Trmt10c	80	51.275	ENSORLG00000004992	trmt10c	70	51.275	Oryzias_latipes
MGP_CAROLIEiJ_G0020812	Trmt10c	80	51.275	ENSORLG00020016083	trmt10c	70	51.275	Oryzias_latipes_hni
MGP_CAROLIEiJ_G0020812	Trmt10c	80	50.708	ENSORLG00015014590	trmt10c	70	50.708	Oryzias_latipes_hsok
MGP_CAROLIEiJ_G0020812	Trmt10c	51	59.155	ENSOMEG00000016820	trmt10c	77	59.155	Oryzias_melastigma
MGP_CAROLIEiJ_G0020812	Trmt10c	50	32.719	ENSOMEG00000016483	trmt10b	62	33.161	Oryzias_melastigma
MGP_CAROLIEiJ_G0020812	Trmt10c	100	74.038	ENSOGAG00000001819	TRMT10C	100	74.038	Otolemur_garnettii
MGP_CAROLIEiJ_G0020812	Trmt10c	99	75.550	ENSOARG00000001677	TRMT10C	96	75.550	Ovis_aries
MGP_CAROLIEiJ_G0020812	Trmt10c	57	30.417	ENSPPAG00000036969	TRMT10B	84	31.183	Pan_paniscus
MGP_CAROLIEiJ_G0020812	Trmt10c	99	75.795	ENSPTIG00000002271	TRMT10C	97	75.795	Panthera_tigris_altaica
MGP_CAROLIEiJ_G0020812	Trmt10c	96	76.692	ENSPTRG00000051763	-	99	76.692	Pan_troglodytes
MGP_CAROLIEiJ_G0020812	Trmt10c	96	76.692	ENSPTRG00000015171	TRMT10C	99	76.692	Pan_troglodytes
MGP_CAROLIEiJ_G0020812	Trmt10c	57	30.417	ENSPTRG00000020951	TRMT10B	84	31.183	Pan_troglodytes
MGP_CAROLIEiJ_G0020812	Trmt10c	57	30.000	ENSPANG00000025571	TRMT10B	84	30.645	Papio_anubis
MGP_CAROLIEiJ_G0020812	Trmt10c	94	47.761	ENSPKIG00000010307	trmt10c	84	46.287	Paramormyrops_kingsleyae
MGP_CAROLIEiJ_G0020812	Trmt10c	82	58.997	ENSPSIG00000004052	TRMT10C	83	59.064	Pelodiscus_sinensis
MGP_CAROLIEiJ_G0020812	Trmt10c	52	55.349	ENSPMGG00000001599	trmt10c	75	55.349	Periophthalmus_magnuspinnatus
MGP_CAROLIEiJ_G0020812	Trmt10c	100	84.541	ENSPEMG00000006986	Trmt10c	100	84.541	Peromyscus_maniculatus_bairdii
MGP_CAROLIEiJ_G0020812	Trmt10c	99	55.156	ENSPCIG00000016080	TRMT10C	98	55.156	Phascolarctos_cinereus
MGP_CAROLIEiJ_G0020812	Trmt10c	80	51.304	ENSPFOG00000009282	trmt10c	85	51.585	Poecilia_formosa
MGP_CAROLIEiJ_G0020812	Trmt10c	55	55.556	ENSPLAG00000010774	trmt10c	84	55.556	Poecilia_latipinna
MGP_CAROLIEiJ_G0020812	Trmt10c	52	57.604	ENSPMEG00000023060	trmt10c	76	57.604	Poecilia_mexicana
MGP_CAROLIEiJ_G0020812	Trmt10c	93	46.890	ENSPREG00000021808	trmt10c	82	46.539	Poecilia_reticulata
MGP_CAROLIEiJ_G0020812	Trmt10c	99	76.341	ENSPPYG00000013592	TRMT10C	96	76.341	Pongo_abelii
MGP_CAROLIEiJ_G0020812	Trmt10c	96	75.439	ENSPCAG00000001290	TRMT10C	99	75.439	Procavia_capensis
MGP_CAROLIEiJ_G0020812	Trmt10c	96	76.131	ENSPVAG00000009885	TRMT10C	99	76.131	Pteropus_vampyrus
MGP_CAROLIEiJ_G0020812	Trmt10c	84	47.606	ENSPNYG00000003607	trmt10c	81	48.451	Pundamilia_nyererei
MGP_CAROLIEiJ_G0020812	Trmt10c	52	60.185	ENSPNAG00000010519	trmt10c	72	58.222	Pygocentrus_nattereri
MGP_CAROLIEiJ_G0020812	Trmt10c	100	90.097	ENSRNOG00000039567	Trmt10c	100	90.097	Rattus_norvegicus
MGP_CAROLIEiJ_G0020812	Trmt10c	57	30.000	ENSRBIG00000029751	TRMT10B	84	30.645	Rhinopithecus_bieti
MGP_CAROLIEiJ_G0020812	Trmt10c	57	30.000	ENSRROG00000036392	TRMT10B	84	30.645	Rhinopithecus_roxellana
MGP_CAROLIEiJ_G0020812	Trmt10c	93	76.684	ENSSBOG00000023326	TRMT10C	100	76.684	Saimiri_boliviensis_boliviensis
MGP_CAROLIEiJ_G0020812	Trmt10c	99	54.197	ENSSHAG00000008854	TRMT10C	97	54.197	Sarcophilus_harrisii
MGP_CAROLIEiJ_G0020812	Trmt10c	81	50.997	ENSSFOG00015008704	trmt10c	79	49.003	Scleropages_formosus
MGP_CAROLIEiJ_G0020812	Trmt10c	92	44.769	ENSSMAG00000021322	trmt10c	77	46.384	Scophthalmus_maximus
MGP_CAROLIEiJ_G0020812	Trmt10c	90	44.444	ENSSDUG00000006430	trmt10c	86	43.165	Seriola_dumerili
MGP_CAROLIEiJ_G0020812	Trmt10c	63	51.724	ENSSLDG00000001023	trmt10c	79	52.778	Seriola_lalandi_dorsalis
MGP_CAROLIEiJ_G0020812	Trmt10c	96	75.689	ENSSARG00000014342	TRMT10C	99	75.689	Sorex_araneus
MGP_CAROLIEiJ_G0020812	Trmt10c	88	51.499	ENSSPUG00000018495	TRMT10C	88	51.499	Sphenodon_punctatus
MGP_CAROLIEiJ_G0020812	Trmt10c	92	47.423	ENSSPAG00000016082	trmt10c	90	46.392	Stegastes_partitus
MGP_CAROLIEiJ_G0020812	Trmt10c	99	76.087	ENSSSCG00000011956	TRMT10C	99	76.087	Sus_scrofa
MGP_CAROLIEiJ_G0020812	Trmt10c	80	55.856	ENSTGUG00000013621	TRMT10C	99	55.856	Taeniopygia_guttata
MGP_CAROLIEiJ_G0020812	Trmt10c	67	51.228	ENSTRUG00000024252	trmt10c	85	51.228	Takifugu_rubripes
MGP_CAROLIEiJ_G0020812	Trmt10c	86	47.154	ENSTNIG00000009440	trmt10c	98	46.612	Tetraodon_nigroviridis
MGP_CAROLIEiJ_G0020812	Trmt10c	96	76.190	ENSTBEG00000013894	TRMT10C	99	76.190	Tupaia_belangeri
MGP_CAROLIEiJ_G0020812	Trmt10c	95	76.709	ENSTTRG00000015004	TRMT10C	98	76.709	Tursiops_truncatus
MGP_CAROLIEiJ_G0020812	Trmt10c	99	76.098	ENSUAMG00000017378	TRMT10C	99	76.098	Ursus_americanus
MGP_CAROLIEiJ_G0020812	Trmt10c	99	76.098	ENSUMAG00000003252	TRMT10C	99	76.098	Ursus_maritimus
MGP_CAROLIEiJ_G0020812	Trmt10c	100	73.430	ENSVVUG00000021735	TRMT10C	94	73.430	Vulpes_vulpes
MGP_CAROLIEiJ_G0020812	Trmt10c	80	53.916	ENSXETG00000029921	trmt10c	85	61.261	Xenopus_tropicalis
MGP_CAROLIEiJ_G0020812	Trmt10c	68	52.759	ENSXCOG00000002876	trmt10c	94	52.921	Xiphophorus_couchianus
MGP_CAROLIEiJ_G0020812	Trmt10c	68	30.034	ENSXCOG00000009025	trmt10b	57	33.333	Xiphophorus_couchianus
MGP_CAROLIEiJ_G0020812	Trmt10c	80	50.000	ENSXMAG00000019205	trmt10c	71	50.416	Xiphophorus_maculatus