EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_CAROLIEiJ_G0020856 (Gene tree)
Gene ID: 110311501
Gene Symbol: Arl13b
Alias: A530097K21Rik|A930014M17Rik|Arl2l1|C530009C10Rik|hnn
Full Name: ADP ribosylation factor like GTPase 13B
Gene Type: protein_coding
Species: Mus_caroli
Status: putative
Strand: Minus strand
Length: 53293 bases
Position: chr16:58722887-58776179
Accession: 110311501
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CAROLIEiJ_P0042008	MMR_HSR1	PF01926.23	9.4e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CAROLIEiJ_T0042008	-	3530	-	MGP_CAROLIEiJ_P0042008	426 (aa)	XP_021040500	UPI000A31A325
MGP_CAROLIEiJ_T0042009	-	473	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0042011	-	2244	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_CAROLIEiJ_G0020856's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CAROLIEiJ_G0020856's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_CAROLIEiJ_G0020856	Arl13b	99	63.403	ENSAPOG00000013256	arl13b	99	62.413	Acanthochromis_polyacanthus
MGP_CAROLIEiJ_G0020856	Arl13b	100	65.023	ENSACIG00000017582	arl13b	91	81.364	Amphilophus_citrinellus
MGP_CAROLIEiJ_G0020856	Arl13b	99	63.403	ENSAOCG00000002828	arl13b	99	62.413	Amphiprion_ocellaris
MGP_CAROLIEiJ_G0020856	Arl13b	94	62.376	ENSAPEG00000014654	arl13b	99	61.671	Amphiprion_percula
MGP_CAROLIEiJ_G0020856	Arl13b	95	62.560	ENSATEG00000017586	arl13b	97	61.557	Anabas_testudineus
MGP_CAROLIEiJ_G0020856	Arl13b	94	72.182	ENSACAG00000000523	ARL13B	99	71.703	Anolis_carolinensis
MGP_CAROLIEiJ_G0020856	Arl13b	100	61.072	ENSACLG00000024227	arl13b	87	80.488	Astatotilapia_calliptera
MGP_CAROLIEiJ_G0020856	Arl13b	100	61.060	ENSAMXG00000042824	arl13b	100	60.599	Astyanax_mexicanus
MGP_CAROLIEiJ_G0020856	Arl13b	99	66.824	ENSCAPG00000006764	ARL13B	94	82.759	Cavia_aperea
MGP_CAROLIEiJ_G0020856	Arl13b	99	74.353	ENSCPOG00000002558	ARL13B	99	72.642	Cavia_porcellus
MGP_CAROLIEiJ_G0020856	Arl13b	95	80.392	ENSCLAG00000006379	ARL13B	100	82.843	Chinchilla_lanigera
MGP_CAROLIEiJ_G0020856	Arl13b	100	72.917	ENSCPBG00000005599	ARL13B	100	73.148	Chrysemys_picta_bellii
MGP_CAROLIEiJ_G0020856	Arl13b	99	58.275	ENSCSEG00000005258	arl13b	99	59.217	Cynoglossus_semilaevis
MGP_CAROLIEiJ_G0020856	Arl13b	100	61.751	ENSCVAG00000001545	arl13b	87	79.091	Cyprinodon_variegatus
MGP_CAROLIEiJ_G0020856	Arl13b	100	62.442	ENSDARG00000012763	arl13b	84	80.455	Danio_rerio
MGP_CAROLIEiJ_G0020856	Arl13b	62	49.430	ENSEBUG00000006528	arl13b	90	49.430	Eptatretus_burgeri
MGP_CAROLIEiJ_G0020856	Arl13b	100	73.721	ENSEEUG00000010823	ARL13B	100	73.721	Erinaceus_europaeus
MGP_CAROLIEiJ_G0020856	Arl13b	94	65.509	ENSFALG00000001654	ARL13B	99	66.089	Ficedula_albicollis
MGP_CAROLIEiJ_G0020856	Arl13b	100	82.831	ENSFDAG00000006556	ARL13B	100	85.383	Fukomys_damarensis
MGP_CAROLIEiJ_G0020856	Arl13b	94	59.069	ENSFHEG00000016049	arl13b	99	58.088	Fundulus_heteroclitus
MGP_CAROLIEiJ_G0020856	Arl13b	81	70.498	ENSGMOG00000018628	arl13b	100	72.691	Gadus_morhua
MGP_CAROLIEiJ_G0020856	Arl13b	99	60.284	ENSGAFG00000000025	arl13b	82	79.545	Gambusia_affinis
MGP_CAROLIEiJ_G0020856	Arl13b	99	60.280	ENSGACG00000014228	arl13b	99	59.813	Gasterosteus_aculeatus
MGP_CAROLIEiJ_G0020856	Arl13b	100	72.917	ENSGAGG00000019336	ARL13B	100	72.917	Gopherus_agassizii
MGP_CAROLIEiJ_G0020856	Arl13b	100	62.791	ENSHBUG00000020619	arl13b	100	61.305	Haplochromis_burtoni
MGP_CAROLIEiJ_G0020856	Arl13b	94	62.438	ENSHCOG00000006106	arl13b	98	60.891	Hippocampus_comes
MGP_CAROLIEiJ_G0020856	Arl13b	99	63.869	ENSKMAG00000001122	arl13b	99	61.916	Kryptolebias_marmoratus
MGP_CAROLIEiJ_G0020856	Arl13b	99	63.023	ENSLBEG00000014612	arl13b	99	59.813	Labrus_bergylta
MGP_CAROLIEiJ_G0020856	Arl13b	100	66.059	ENSLOCG00000010465	arl13b	100	66.743	Lepisosteus_oculatus
MGP_CAROLIEiJ_G0020856	Arl13b	99	63.170	ENSMAMG00000021452	arl13b	99	62.383	Mastacembelus_armatus
MGP_CAROLIEiJ_G0020856	Arl13b	100	63.869	ENSMZEG00005017827	arl13b	100	62.005	Maylandia_zebra
MGP_CAROLIEiJ_G0020856	Arl13b	99	60.000	ENSMMOG00000010253	arl13b	99	58.879	Mola_mola
MGP_CAROLIEiJ_G0020856	Arl13b	85	69.928	ENSMALG00000014655	arl13b	99	71.269	Monopterus_albus
MGP_CAROLIEiJ_G0020856	Arl13b	100	97.892	ENSMUSG00000022911	Arl13b	100	97.892	Mus_musculus
MGP_CAROLIEiJ_G0020856	Arl13b	100	95.082	MGP_PahariEiJ_G0016561	Arl13b	100	95.082	Mus_pahari
MGP_CAROLIEiJ_G0020856	Arl13b	100	98.126	MGP_SPRETEiJ_G0021763	Arl13b	100	98.126	Mus_spretus
MGP_CAROLIEiJ_G0020856	Arl13b	96	82.809	ENSMLUG00000017473	ARL13B	96	82.567	Myotis_lucifugus
MGP_CAROLIEiJ_G0020856	Arl13b	72	81.106	ENSNBRG00000004078	arl13b	96	73.606	Neolamprologus_brichardi
MGP_CAROLIEiJ_G0020856	Arl13b	100	79.350	ENSNLEG00000001772	ARL13B	100	77.494	Nomascus_leucogenys
MGP_CAROLIEiJ_G0020856	Arl13b	74	70.565	ENSMEUG00000008036	-	80	69.796	Notamacropus_eugenii
MGP_CAROLIEiJ_G0020856	Arl13b	100	82.135	ENSODEG00000011381	ARL13B	100	82.135	Octodon_degus
MGP_CAROLIEiJ_G0020856	Arl13b	100	63.122	ENSONIG00000001864	arl13b	100	62.529	Oreochromis_niloticus
MGP_CAROLIEiJ_G0020856	Arl13b	99	62.704	ENSORLG00000006350	arl13b	87	80.909	Oryzias_latipes
MGP_CAROLIEiJ_G0020856	Arl13b	99	62.471	ENSORLG00020013754	arl13b	99	61.982	Oryzias_latipes_hni
MGP_CAROLIEiJ_G0020856	Arl13b	99	62.238	ENSORLG00015012586	arl13b	99	61.751	Oryzias_latipes_hsok
MGP_CAROLIEiJ_G0020856	Arl13b	51	76.037	ENSOMEG00000010187	arl13b	85	76.364	Oryzias_melastigma
MGP_CAROLIEiJ_G0020856	Arl13b	94	73.892	ENSPSIG00000018115	ARL13B	99	73.399	Pelodiscus_sinensis
MGP_CAROLIEiJ_G0020856	Arl13b	99	63.023	ENSPMGG00000004584	arl13b	99	61.628	Periophthalmus_magnuspinnatus
MGP_CAROLIEiJ_G0020856	Arl13b	100	54.795	ENSPCIG00000026984	ARL13B	98	53.950	Phascolarctos_cinereus
MGP_CAROLIEiJ_G0020856	Arl13b	100	60.698	ENSPFOG00000005379	arl13b	100	60.465	Poecilia_formosa
MGP_CAROLIEiJ_G0020856	Arl13b	94	59.506	ENSPLAG00000008699	arl13b	99	59.259	Poecilia_latipinna
MGP_CAROLIEiJ_G0020856	Arl13b	96	60.048	ENSPMEG00000015387	arl13b	99	59.806	Poecilia_mexicana
MGP_CAROLIEiJ_G0020856	Arl13b	100	60.233	ENSPREG00000006291	arl13b	100	60.465	Poecilia_reticulata
MGP_CAROLIEiJ_G0020856	Arl13b	98	59.427	ENSPNYG00000022879	arl13b	100	59.189	Pundamilia_nyererei
MGP_CAROLIEiJ_G0020856	Arl13b	62	71.747	ENSPNAG00000003803	arl13b	100	61.379	Pygocentrus_nattereri
MGP_CAROLIEiJ_G0020856	Arl13b	53	74.222	ENSSFOG00015005491	arl13b	85	74.886	Scleropages_formosus
MGP_CAROLIEiJ_G0020856	Arl13b	50	66.667	ENSSFOG00015023057	arl13b	85	66.667	Scleropages_formosus
MGP_CAROLIEiJ_G0020856	Arl13b	99	59.122	ENSSMAG00000015450	arl13b	99	58.275	Scophthalmus_maximus
MGP_CAROLIEiJ_G0020856	Arl13b	94	62.624	ENSSDUG00000005560	arl13b	96	60.680	Seriola_dumerili
MGP_CAROLIEiJ_G0020856	Arl13b	94	62.624	ENSSLDG00000013361	arl13b	99	60.680	Seriola_lalandi_dorsalis
MGP_CAROLIEiJ_G0020856	Arl13b	99	81.119	ENSSARG00000003872	ARL13B	99	81.119	Sorex_araneus
MGP_CAROLIEiJ_G0020856	Arl13b	54	92.609	ENSSPUG00000006649	ARL13B	89	92.727	Sphenodon_punctatus
MGP_CAROLIEiJ_G0020856	Arl13b	96	62.410	ENSSPAG00000016442	arl13b	91	61.446	Stegastes_partitus
MGP_CAROLIEiJ_G0020856	Arl13b	100	66.133	ENSTGUG00000013493	ARL13B	100	64.908	Taeniopygia_guttata
MGP_CAROLIEiJ_G0020856	Arl13b	100	48.344	ENSTRUG00000013035	-	86	67.727	Takifugu_rubripes
MGP_CAROLIEiJ_G0020856	Arl13b	50	66.512	ENSTRUG00000003641	arl13b	77	66.832	Takifugu_rubripes
MGP_CAROLIEiJ_G0020856	Arl13b	100	77.262	ENSVVUG00000021511	ARL13B	100	76.334	Vulpes_vulpes
MGP_CAROLIEiJ_G0020856	Arl13b	100	67.898	ENSXETG00000032383	ARL13B	97	77.985	Xenopus_tropicalis
MGP_CAROLIEiJ_G0020856	Arl13b	62	36.296	ENSXETG00000026166	arl13a	62	34.201	Xenopus_tropicalis
MGP_CAROLIEiJ_G0020856	Arl13b	80	79.263	ENSXCOG00000016955	arl13b	100	73.408	Xiphophorus_couchianus
MGP_CAROLIEiJ_G0020856	Arl13b	99	60.706	ENSXMAG00000002089	arl13b	99	60.000	Xiphophorus_maculatus