EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
MGP_CAROLIEiJ_G0020951 (Gene tree)
Gene ID
110311455
Gene Symbol
Synj1
Alias
A930006D20Rik
Full Name
synaptojanin 1
Gene Type
protein_coding
Species
Mus_caroli
Status
putative
Strand
Minus strand
Length
79671 bases
Position
chr16:85327085-85406755
Accession
110311455
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
MGP_CAROLIEiJ_P0042239Exo_endo_phosPF03372.231e-1411
MGP_CAROLIEiJ_P0042241Exo_endo_phosPF03372.231e-1411
MGP_CAROLIEiJ_P0042238Exo_endo_phosPF03372.231.4e-1411
MGP_CAROLIEiJ_P0042246Exo_endo_phosPF03372.232.5e-0711
MGP_CAROLIEiJ_P0042239DUF1866PF08952.114.1e-5711
MGP_CAROLIEiJ_P0042241DUF1866PF08952.114.1e-5711
MGP_CAROLIEiJ_P0042238DUF1866PF08952.114.9e-5711
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
MGP_CAROLIEiJ_T0042246-2189-MGP_CAROLIEiJ_P0042246693 (aa)--
MGP_CAROLIEiJ_T0042247-953--- (aa)--
MGP_CAROLIEiJ_T0042244-354-MGP_CAROLIEiJ_P0042244117 (aa)--
MGP_CAROLIEiJ_T0042245-2743--- (aa)--
MGP_CAROLIEiJ_T0042242-772--- (aa)--
MGP_CAROLIEiJ_T0042243-547-MGP_CAROLIEiJ_P0042243103 (aa)--
MGP_CAROLIEiJ_T0042240-3489-MGP_CAROLIEiJ_P0042240188 (aa)--
MGP_CAROLIEiJ_T0042241-4771-MGP_CAROLIEiJ_P00422411323 (aa)--
MGP_CAROLIEiJ_T0042239-7000-MGP_CAROLIEiJ_P00422391309 (aa)--
MGP_CAROLIEiJ_T0042238-7079XM_021184773MGP_CAROLIEiJ_P00422381607 (aa)XP_021040432-
Gene Model
Click here to download MGP_CAROLIEiJ_G0020951's gene model file
Protein-Protein Interaction (PPI)

Clik here to download MGP_CAROLIEiJ_G0020951's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
MGP_CAROLIEiJ_G0020951Synj110059.914MGP_CAROLIEiJ_G0021026Synj29959.731
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
MGP_CAROLIEiJ_G0020951Synj110097.403ENSG00000159082SYNJ19997.403Homo_sapiens
MGP_CAROLIEiJ_G0020951Synj110083.453ENSAPOG00000002809synj19869.162Acanthochromis_polyacanthus
MGP_CAROLIEiJ_G0020951Synj110095.720ENSAMEG00000015028SYNJ110088.057Ailuropoda_melanoleuca
MGP_CAROLIEiJ_G0020951Synj110079.568ENSACIG00000008857synj19766.892Amphilophus_citrinellus
MGP_CAROLIEiJ_G0020951Synj110082.878ENSAOCG00000009835synj19667.097Amphiprion_ocellaris
MGP_CAROLIEiJ_G0020951Synj110082.878ENSAPEG00000021010synj19060.895Amphiprion_percula
MGP_CAROLIEiJ_G0020951Synj110082.302ENSATEG00000002306synj18764.141Anabas_testudineus
MGP_CAROLIEiJ_G0020951Synj110091.051ENSAPLG00000011832SYNJ110077.575Anas_platyrhynchos
MGP_CAROLIEiJ_G0020951Synj110090.442ENSACAG00000003006-10083.384Anolis_carolinensis
MGP_CAROLIEiJ_G0020951Synj110097.114ENSANAG00000027325SYNJ110092.612Aotus_nancymaae
MGP_CAROLIEiJ_G0020951Synj110082.590ENSACLG00000002255synj19867.283Astatotilapia_calliptera
MGP_CAROLIEiJ_G0020951Synj110083.046ENSAMXG00000008208synj19560.236Astyanax_mexicanus
MGP_CAROLIEiJ_G0020951Synj110096.970ENSBTAG00000003063SYNJ110091.818Bos_taurus
MGP_CAROLIEiJ_G0020951Synj110097.691ENSCJAG00000009187SYNJ110092.765Callithrix_jacchus
MGP_CAROLIEiJ_G0020951Synj110096.970ENSCAFG00000009041SYNJ110087.698Canis_familiaris
MGP_CAROLIEiJ_G0020951Synj110097.403ENSCAFG00020025776SYNJ19887.529Canis_lupus_dingo
MGP_CAROLIEiJ_G0020951Synj110097.114ENSCHIG00000005095SYNJ110084.341Capra_hircus
MGP_CAROLIEiJ_G0020951Synj110096.825ENSTSYG00000014541SYNJ110091.540Carlito_syrichta
MGP_CAROLIEiJ_G0020951Synj18987.400ENSCAPG00000014483SYNJ19978.613Cavia_aperea
MGP_CAROLIEiJ_G0020951Synj110097.403ENSCPOG00000012182SYNJ110093.064Cavia_porcellus
MGP_CAROLIEiJ_G0020951Synj110097.114ENSCCAG00000020825SYNJ110092.384Cebus_capucinus
MGP_CAROLIEiJ_G0020951Synj110097.547ENSCATG00000033891SYNJ110092.683Cercocebus_atys
MGP_CAROLIEiJ_G0020951Synj110097.403ENSCLAG00000009796SYNJ110097.403Chinchilla_lanigera
MGP_CAROLIEiJ_G0020951Synj110095.863ENSCSAG00000009654SYNJ110093.750Chlorocebus_sabaeus
MGP_CAROLIEiJ_G0020951Synj183100.000ENSCHOG00000012390SYNJ18790.554Choloepus_hoffmanni
MGP_CAROLIEiJ_G0020951Synj110093.218ENSCPBG00000006402SYNJ19787.298Chrysemys_picta_bellii
MGP_CAROLIEiJ_G0020951Synj110097.547ENSCANG00000031359SYNJ110092.683Colobus_angolensis_palliatus
MGP_CAROLIEiJ_G0020951Synj110097.691ENSCGRG00001010861Synj110095.646Cricetulus_griseus_chok1gshd
MGP_CAROLIEiJ_G0020951Synj110097.691ENSCGRG00000015749Synj110097.691Cricetulus_griseus_crigri
MGP_CAROLIEiJ_G0020951Synj110081.366ENSCSEG00000019614synj19968.788Cynoglossus_semilaevis
MGP_CAROLIEiJ_G0020951Synj110077.641ENSCVAG00000019250synj19367.912Cyprinodon_variegatus
MGP_CAROLIEiJ_G0020951Synj110081.935ENSDARG00000025011synj110068.741Danio_rerio
MGP_CAROLIEiJ_G0020951Synj110089.235ENSDNOG00000010732SYNJ19983.386Dasypus_novemcinctus
MGP_CAROLIEiJ_G0020951Synj110097.691ENSDORG00000014735-10097.691Dipodomys_ordii
MGP_CAROLIEiJ_G0020951Synj18694.928ENSETEG00000018674SYNJ17894.928Echinops_telfairi
MGP_CAROLIEiJ_G0020951Synj110097.403ENSEASG00005006287SYNJ19893.035Equus_asinus_asinus
MGP_CAROLIEiJ_G0020951Synj110097.258ENSECAG00000004829SYNJ110088.213Equus_caballus
MGP_CAROLIEiJ_G0020951Synj183100.000ENSEEUG00000005150SYNJ19587.617Erinaceus_europaeus
MGP_CAROLIEiJ_G0020951Synj110081.439ENSELUG00000009731synj19565.940Esox_lucius
MGP_CAROLIEiJ_G0020951Synj110097.258ENSFCAG00000012498SYNJ110090.868Felis_catus
MGP_CAROLIEiJ_G0020951Synj17477.630ENSFALG00000004680SYNJ110069.335Ficedula_albicollis
MGP_CAROLIEiJ_G0020951Synj110097.835ENSFDAG00000016818SYNJ110097.835Fukomys_damarensis
MGP_CAROLIEiJ_G0020951Synj110080.939ENSFHEG00000017689synj19658.745Fundulus_heteroclitus
MGP_CAROLIEiJ_G0020951Synj19379.421ENSGMOG00000014852synj17772.816Gadus_morhua
MGP_CAROLIEiJ_G0020951Synj110092.496ENSGALG00000034317SYNJ110074.185Gallus_gallus
MGP_CAROLIEiJ_G0020951Synj110082.302ENSGAFG00000019466synj18961.111Gambusia_affinis
MGP_CAROLIEiJ_G0020951Synj19876.301ENSGACG00000020575synj19464.324Gasterosteus_aculeatus
MGP_CAROLIEiJ_G0020951Synj110093.362ENSGAGG00000022523SYNJ110084.899Gopherus_agassizii
MGP_CAROLIEiJ_G0020951Synj110097.403ENSGGOG00000015945SYNJ110092.683Gorilla_gorilla
MGP_CAROLIEiJ_G0020951Synj110081.223ENSHBUG00000007774synj19868.597Haplochromis_burtoni
MGP_CAROLIEiJ_G0020951Synj110097.547ENSHGLG00000006420SYNJ110097.547Heterocephalus_glaber_female
MGP_CAROLIEiJ_G0020951Synj110097.547ENSHGLG00100012591SYNJ110097.547Heterocephalus_glaber_male
MGP_CAROLIEiJ_G0020951Synj110077.122ENSHCOG00000012774synj18671.906Hippocampus_comes
MGP_CAROLIEiJ_G0020951Synj110082.878ENSIPUG00000010691SYNJ19561.115Ictalurus_punctatus
MGP_CAROLIEiJ_G0020951Synj110097.547ENSSTOG00000015806SYNJ110095.198Ictidomys_tridecemlineatus
MGP_CAROLIEiJ_G0020951Synj19988.931ENSJJAG00000020168Synj110085.136Jaculus_jaculus
MGP_CAROLIEiJ_G0020951Synj110082.302ENSKMAG00000004221synj19671.632Kryptolebias_marmoratus
MGP_CAROLIEiJ_G0020951Synj110081.674ENSLBEG00000015081synj19766.021Labrus_bergylta
MGP_CAROLIEiJ_G0020951Synj110086.544ENSLACG00000005928SYNJ19869.624Latimeria_chalumnae
MGP_CAROLIEiJ_G0020951Synj110084.637ENSLOCG00000009230synj110070.046Lepisosteus_oculatus
MGP_CAROLIEiJ_G0020951Synj110095.292ENSLAFG00000011806SYNJ19986.481Loxodonta_africana
MGP_CAROLIEiJ_G0020951Synj19497.090ENSMFAG00000018883SYNJ19993.396Macaca_fascicularis
MGP_CAROLIEiJ_G0020951Synj110096.291ENSMMUG00000004624SYNJ110093.460Macaca_mulatta
MGP_CAROLIEiJ_G0020951Synj110097.547ENSMNEG00000040077SYNJ19593.693Macaca_nemestrina
MGP_CAROLIEiJ_G0020951Synj110097.547ENSMLEG00000037029SYNJ110092.683Mandrillus_leucophaeus
MGP_CAROLIEiJ_G0020951Synj110083.022ENSMAMG00000013404synj18862.956Mastacembelus_armatus
MGP_CAROLIEiJ_G0020951Synj110082.590ENSMZEG00005024358synj19867.258Maylandia_zebra
MGP_CAROLIEiJ_G0020951Synj110089.109ENSMGAG00000014522SYNJ110077.193Meleagris_gallopavo
MGP_CAROLIEiJ_G0020951Synj110097.691ENSMAUG00000009743Synj110097.691Mesocricetus_auratus
MGP_CAROLIEiJ_G0020951Synj110097.258ENSMICG00000034953SYNJ110092.302Microcebus_murinus
MGP_CAROLIEiJ_G0020951Synj110081.277ENSMMOG00000010203synj19667.797Mola_mola
MGP_CAROLIEiJ_G0020951Synj110085.877ENSMODG00000021073SYNJ110078.804Monodelphis_domestica
MGP_CAROLIEiJ_G0020951Synj110082.734ENSMALG00000014015synj19660.451Monopterus_albus
MGP_CAROLIEiJ_G0020951Synj110099.567ENSMUSG00000022973Synj110099.567Mus_musculus
MGP_CAROLIEiJ_G0020951Synj110099.278MGP_PahariEiJ_G0016656Synj110099.278Mus_pahari
MGP_CAROLIEiJ_G0020951Synj110099.278MGP_SPRETEiJ_G0021857Synj110099.278Mus_spretus
MGP_CAROLIEiJ_G0020951Synj110095.745ENSMPUG00000001153SYNJ110087.437Mustela_putorius_furo
MGP_CAROLIEiJ_G0020951Synj16282.497ENSMLUG00000005764-10073.592Myotis_lucifugus
MGP_CAROLIEiJ_G0020951Synj19494.640ENSMLUG00000026584-10094.519Myotis_lucifugus
MGP_CAROLIEiJ_G0020951Synj110097.835ENSNGAG00000000453Synj110097.835Nannospalax_galili
MGP_CAROLIEiJ_G0020951Synj110082.734ENSNBRG00000011936synj19764.490Neolamprologus_brichardi
MGP_CAROLIEiJ_G0020951Synj18889.599ENSNLEG00000003734SYNJ110088.263Nomascus_leucogenys
MGP_CAROLIEiJ_G0020951Synj18979.399ENSMEUG00000004158-7377.364Notamacropus_eugenii
MGP_CAROLIEiJ_G0020951Synj110090.157ENSOPRG00000013602SYNJ19392.805Ochotona_princeps
MGP_CAROLIEiJ_G0020951Synj110096.825ENSODEG00000002409-10096.825Octodon_degus
MGP_CAROLIEiJ_G0020951Synj110081.650ENSONIG00000004667synj110067.666Oreochromis_niloticus
MGP_CAROLIEiJ_G0020951Synj19491.518ENSOANG00000006929SYNJ19478.557Ornithorhynchus_anatinus
MGP_CAROLIEiJ_G0020951Synj110095.578ENSOCUG00000001420SYNJ110084.810Oryctolagus_cuniculus
MGP_CAROLIEiJ_G0020951Synj110081.295ENSORLG00000004320synj19268.765Oryzias_latipes
MGP_CAROLIEiJ_G0020951Synj110077.809ENSORLG00020011994synj19667.767Oryzias_latipes_hni
MGP_CAROLIEiJ_G0020951Synj110081.439ENSORLG00015018077synj19458.535Oryzias_latipes_hsok
MGP_CAROLIEiJ_G0020951Synj110082.014ENSOMEG00000014322synj19766.123Oryzias_melastigma
MGP_CAROLIEiJ_G0020951Synj110088.855ENSOGAG00000006010SYNJ110084.932Otolemur_garnettii
MGP_CAROLIEiJ_G0020951Synj110095.461ENSOARG00000013414SYNJ19885.535Ovis_aries
MGP_CAROLIEiJ_G0020951Synj110097.403ENSPPAG00000026784SYNJ110092.759Pan_paniscus
MGP_CAROLIEiJ_G0020951Synj110097.403ENSPPRG00000023469SYNJ110090.944Panthera_pardus
MGP_CAROLIEiJ_G0020951Synj110097.258ENSPTIG00000007930SYNJ110090.868Panthera_tigris_altaica
MGP_CAROLIEiJ_G0020951Synj110097.403ENSPTRG00000048135-10088.897Pan_troglodytes
MGP_CAROLIEiJ_G0020951Synj110097.403ENSPTRG00000023787SYNJ110092.759Pan_troglodytes
MGP_CAROLIEiJ_G0020951Synj110097.547ENSPANG00000022531SYNJ110093.750Papio_anubis
MGP_CAROLIEiJ_G0020951Synj110084.173ENSPKIG00000022603synj19576.500Paramormyrops_kingsleyae
MGP_CAROLIEiJ_G0020951Synj110082.734ENSPMGG00000016831synj19067.195Periophthalmus_magnuspinnatus
MGP_CAROLIEiJ_G0020951Synj110098.124ENSPEMG00000018767Synj110098.124Peromyscus_maniculatus_bairdii
MGP_CAROLIEiJ_G0020951Synj110064.124ENSPMAG00000002887synj19653.318Petromyzon_marinus
MGP_CAROLIEiJ_G0020951Synj110092.496ENSPCIG00000016372SYNJ110085.747Phascolarctos_cinereus
MGP_CAROLIEiJ_G0020951Synj110080.966ENSPFOG00000016886synj110064.628Poecilia_formosa
MGP_CAROLIEiJ_G0020951Synj110081.871ENSPLAG00000017559synj19764.650Poecilia_latipinna
MGP_CAROLIEiJ_G0020951Synj110081.727ENSPMEG00000007643synj18961.391Poecilia_mexicana
MGP_CAROLIEiJ_G0020951Synj110082.302ENSPREG00000012412synj19867.457Poecilia_reticulata
MGP_CAROLIEiJ_G0020951Synj110095.863ENSPPYG00000011365SYNJ19892.151Pongo_abelii
MGP_CAROLIEiJ_G0020951Synj18492.857ENSPCAG00000009906SYNJ18992.857Procavia_capensis
MGP_CAROLIEiJ_G0020951Synj18599.465ENSPCOG00000024841SYNJ19986.801Propithecus_coquereli
MGP_CAROLIEiJ_G0020951Synj110095.578ENSPVAG00000000892SYNJ110084.157Pteropus_vampyrus
MGP_CAROLIEiJ_G0020951Synj110082.590ENSPNYG00000022989synj19768.979Pundamilia_nyererei
MGP_CAROLIEiJ_G0020951Synj110082.734ENSPNAG00000021119synj19177.063Pygocentrus_nattereri
MGP_CAROLIEiJ_G0020951Synj110098.146ENSRNOG00000002051Synj110097.485Rattus_norvegicus
MGP_CAROLIEiJ_G0020951Synj110097.403ENSRBIG00000034477SYNJ110092.835Rhinopithecus_bieti
MGP_CAROLIEiJ_G0020951Synj110096.006ENSRROG00000039256SYNJ110092.835Rhinopithecus_roxellana
MGP_CAROLIEiJ_G0020951Synj110097.547ENSSBOG00000021001SYNJ110092.536Saimiri_boliviensis_boliviensis
MGP_CAROLIEiJ_G0020951Synj110091.775ENSSHAG00000008538SYNJ19777.102Sarcophilus_harrisii
MGP_CAROLIEiJ_G0020951Synj110083.165ENSSFOG00015006095synj19561.938Scleropages_formosus
MGP_CAROLIEiJ_G0020951Synj110082.014ENSSMAG00000018066synj19566.567Scophthalmus_maximus
MGP_CAROLIEiJ_G0020951Synj110083.022ENSSDUG00000013058synj18962.313Seriola_dumerili
MGP_CAROLIEiJ_G0020951Synj110082.590ENSSLDG00000021406synj19768.134Seriola_lalandi_dorsalis
MGP_CAROLIEiJ_G0020951Synj17693.645ENSSARG00000009490SYNJ17395.489Sorex_araneus
MGP_CAROLIEiJ_G0020951Synj110093.218ENSSPUG00000012552SYNJ110074.230Sphenodon_punctatus
MGP_CAROLIEiJ_G0020951Synj18983.119ENSSPAG00000006812SYNJ19657.928Stegastes_partitus
MGP_CAROLIEiJ_G0020951Synj110083.165ENSSPAG00000017029synj19767.230Stegastes_partitus
MGP_CAROLIEiJ_G0020951Synj110097.403ENSSSCG00000012035SYNJ110091.970Sus_scrofa
MGP_CAROLIEiJ_G0020951Synj110090.652ENSTGUG00000013445SYNJ110076.038Taeniopygia_guttata
MGP_CAROLIEiJ_G0020951Synj110082.014ENSTRUG00000006907synj19362.677Takifugu_rubripes
MGP_CAROLIEiJ_G0020951Synj110076.999ENSTNIG00000009940synj110066.618Tetraodon_nigroviridis
MGP_CAROLIEiJ_G0020951Synj19299.465ENSTBEG00000016298SYNJ19286.660Tupaia_belangeri
MGP_CAROLIEiJ_G0020951Synj110089.729ENSTTRG00000002222SYNJ110077.939Tursiops_truncatus
MGP_CAROLIEiJ_G0020951Synj110097.403ENSUAMG00000018606SYNJ19995.218Ursus_americanus
MGP_CAROLIEiJ_G0020951Synj110097.403ENSUMAG00000018419SYNJ19995.218Ursus_maritimus
MGP_CAROLIEiJ_G0020951Synj18798.571ENSVPAG00000001241SYNJ18798.571Vicugna_pacos
MGP_CAROLIEiJ_G0020951Synj110097.547ENSVVUG00000023125SYNJ110093.288Vulpes_vulpes
MGP_CAROLIEiJ_G0020951Synj110085.127ENSXETG00000009899synj19571.204Xenopus_tropicalis
MGP_CAROLIEiJ_G0020951Synj110081.081ENSXCOG00000011896synj19767.863Xiphophorus_couchianus
MGP_CAROLIEiJ_G0020951Synj110080.797ENSXMAG00000017524synj110067.130Xiphophorus_maculatus

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