EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_CAROLIEiJ_G0020965 (Gene tree)
Gene ID: 110311370
Gene Symbol: Son
Alias: 2900011L12Rik
Full Name: SON DNA binding protein
Gene Type: protein_coding
Species: Mus_caroli
Status: putative
Strand: Plus strand
Length: 32315 bases
Position: chr16:86038201-86070515
Accession: 110311370
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CAROLIEiJ_P0042291	dsrm	PF00035.26	6.4e-10	1	1
MGP_CAROLIEiJ_P0042291	DND1_DSRM	PF14709.7	1.1e-11	1	1
MGP_CAROLIEiJ_P0042296	DND1_DSRM	PF14709.7	2.4e-08	1	1
MGP_CAROLIEiJ_P0042293	DND1_DSRM	PF14709.7	2e-07	1	1
MGP_CAROLIEiJ_P0042296	G-patch	PF01585.23	4.3e-16	1	1
MGP_CAROLIEiJ_P0042291	G-patch	PF01585.23	2.6e-15	1	1
MGP_CAROLIEiJ_P0042293	G-patch	PF01585.23	2.7e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CAROLIEiJ_T0042303	-	649	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0042300	-	725	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0042299	-	656	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0042298	-	735	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0042301	-	602	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0042291	-	8777	XM_021184620	MGP_CAROLIEiJ_P0042291	2488 (aa)	XP_021040279	UPI000A31A491
MGP_CAROLIEiJ_T0042302	-	799	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0042293	-	8453	XM_021184621	MGP_CAROLIEiJ_P0042293	2455 (aa)	XP_021040280	UPI000A319265
MGP_CAROLIEiJ_T0042292	-	7561	XM_021184623	MGP_CAROLIEiJ_P0042292	2332 (aa)	XP_021040282	UPI000A316572
MGP_CAROLIEiJ_T0042295	-	7994	XM_021184626	MGP_CAROLIEiJ_P0042295	2137 (aa)	XP_021040285	UPI000A314BA4
MGP_CAROLIEiJ_T0042294	-	8438	-	MGP_CAROLIEiJ_P0042294	2340 (aa)	-	-
MGP_CAROLIEiJ_T0042297	-	5571	-	MGP_CAROLIEiJ_P0042297	470 (aa)	-	-
MGP_CAROLIEiJ_T0042296	-	2470	-	MGP_CAROLIEiJ_P0042296	454 (aa)	-	-

Gene Model

Click here to download MGP_CAROLIEiJ_G0020965's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CAROLIEiJ_G0020965's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_CAROLIEiJ_G0020965	Son	100	98.391	ENSG00000159140	SON	100	98.391	Homo_sapiens
MGP_CAROLIEiJ_G0020965	Son	69	51.220	ENSACIG00000017870	-	94	64.356	Amphilophus_citrinellus
MGP_CAROLIEiJ_G0020965	Son	72	51.801	ENSATEG00000012732	-	58	53.985	Anabas_testudineus
MGP_CAROLIEiJ_G0020965	Son	93	73.821	ENSAPLG00000008908	-	99	76.341	Anas_platyrhynchos
MGP_CAROLIEiJ_G0020965	Son	99	72.848	ENSACAG00000004681	-	99	76.550	Anolis_carolinensis
MGP_CAROLIEiJ_G0020965	Son	100	99.464	ENSANAG00000035426	SON	100	99.464	Aotus_nancymaae
MGP_CAROLIEiJ_G0020965	Son	78	49.304	ENSACLG00000007098	-	88	51.497	Astatotilapia_calliptera
MGP_CAROLIEiJ_G0020965	Son	100	98.458	ENSCJAG00000046975	SON	100	99.732	Callithrix_jacchus
MGP_CAROLIEiJ_G0020965	Son	100	98.458	ENSCAFG00020025305	SON	100	99.464	Canis_lupus_dingo
MGP_CAROLIEiJ_G0020965	Son	100	98.928	ENSTSYG00000008371	SON	100	98.928	Carlito_syrichta
MGP_CAROLIEiJ_G0020965	Son	85	94.286	ENSCAPG00000017011	SON	83	94.309	Cavia_aperea
MGP_CAROLIEiJ_G0020965	Son	100	99.119	ENSCPOG00000024278	SON	100	99.464	Cavia_porcellus
MGP_CAROLIEiJ_G0020965	Son	100	99.464	ENSCCAG00000030234	SON	100	99.464	Cebus_capucinus
MGP_CAROLIEiJ_G0020965	Son	100	99.464	ENSCATG00000029812	SON	100	99.464	Cercocebus_atys
MGP_CAROLIEiJ_G0020965	Son	100	99.339	ENSCLAG00000011776	SON	100	99.464	Chinchilla_lanigera
MGP_CAROLIEiJ_G0020965	Son	81	41.600	ENSCING00000007049	-	86	43.164	Ciona_intestinalis
MGP_CAROLIEiJ_G0020965	Son	100	99.464	ENSCANG00000025986	SON	100	99.464	Colobus_angolensis_palliatus
MGP_CAROLIEiJ_G0020965	Son	100	99.119	ENSCGRG00001016220	Son	100	99.732	Cricetulus_griseus_chok1gshd
MGP_CAROLIEiJ_G0020965	Son	94	99.065	ENSCGRG00000015260	Son	100	99.732	Cricetulus_griseus_crigri
MGP_CAROLIEiJ_G0020965	Son	100	99.339	ENSDORG00000028617	-	100	99.464	Dipodomys_ordii
MGP_CAROLIEiJ_G0020965	Son	81	97.908	ENSETEG00000019427	SON	83	97.908	Echinops_telfairi
MGP_CAROLIEiJ_G0020965	Son	98	98.356	ENSECAG00000018098	SON	78	83.887	Equus_caballus
MGP_CAROLIEiJ_G0020965	Son	74	97.585	ENSEEUG00000002352	SON	76	98.454	Erinaceus_europaeus
MGP_CAROLIEiJ_G0020965	Son	72	51.482	ENSELUG00000003878	-	78	59.928	Esox_lucius
MGP_CAROLIEiJ_G0020965	Son	100	98.238	ENSFCAG00000028680	-	100	99.464	Felis_catus
MGP_CAROLIEiJ_G0020965	Son	95	71.233	ENSFALG00000002365	-	100	74.390	Ficedula_albicollis
MGP_CAROLIEiJ_G0020965	Son	100	98.899	ENSFDAG00000019128	SON	100	99.196	Fukomys_damarensis
MGP_CAROLIEiJ_G0020965	Son	98	73.198	ENSGALG00000052354	-	99	76.033	Gallus_gallus
MGP_CAROLIEiJ_G0020965	Son	100	98.458	ENSGGOG00000010481	SON	100	99.464	Gorilla_gorilla
MGP_CAROLIEiJ_G0020965	Son	100	99.119	ENSHGLG00000010432	SON	100	99.464	Heterocephalus_glaber_female
MGP_CAROLIEiJ_G0020965	Son	80	98.630	ENSHGLG00100014915	SON	77	81.707	Heterocephalus_glaber_male
MGP_CAROLIEiJ_G0020965	Son	100	99.119	ENSSTOG00000020593	SON	100	99.464	Ictidomys_tridecemlineatus
MGP_CAROLIEiJ_G0020965	Son	100	99.559	ENSJJAG00000013491	-	100	99.732	Jaculus_jaculus
MGP_CAROLIEiJ_G0020965	Son	98	65.859	ENSLACG00000013385	-	99	70.874	Latimeria_chalumnae
MGP_CAROLIEiJ_G0020965	Son	80	66.027	ENSLOCG00000011021	-	75	66.173	Lepisosteus_oculatus
MGP_CAROLIEiJ_G0020965	Son	100	99.464	ENSMFAG00000034427	SON	100	99.464	Macaca_fascicularis
MGP_CAROLIEiJ_G0020965	Son	100	98.458	ENSMMUG00000005511	SON	100	99.464	Macaca_mulatta
MGP_CAROLIEiJ_G0020965	Son	100	99.464	ENSMNEG00000031671	SON	100	99.464	Macaca_nemestrina
MGP_CAROLIEiJ_G0020965	Son	100	99.464	ENSMLEG00000035039	SON	100	99.464	Mandrillus_leucophaeus
MGP_CAROLIEiJ_G0020965	Son	80	71.622	ENSMGAG00000014526	-	95	72.727	Meleagris_gallopavo
MGP_CAROLIEiJ_G0020965	Son	100	99.339	ENSMAUG00000002086	-	100	99.732	Mesocricetus_auratus
MGP_CAROLIEiJ_G0020965	Son	100	99.196	ENSMICG00000033920	SON	100	99.196	Microcebus_murinus
MGP_CAROLIEiJ_G0020965	Son	100	98.458	ENSMOCG00000012860	-	100	99.732	Microtus_ochrogaster
MGP_CAROLIEiJ_G0020965	Son	75	51.989	ENSMALG00000006263	-	91	53.106	Monopterus_albus
MGP_CAROLIEiJ_G0020965	Son	100	100.000	ENSMUSG00000022961	Son	100	100.000	Mus_musculus
MGP_CAROLIEiJ_G0020965	Son	100	100.000	MGP_PahariEiJ_G0016670	Son	100	100.000	Mus_pahari
MGP_CAROLIEiJ_G0020965	Son	100	100.000	MGP_SPRETEiJ_G0021871	Son	100	100.000	Mus_spretus
MGP_CAROLIEiJ_G0020965	Son	100	98.899	ENSNGAG00000000062	-	100	99.464	Nannospalax_galili
MGP_CAROLIEiJ_G0020965	Son	100	99.464	ENSNLEG00000004002	SON	100	99.464	Nomascus_leucogenys
MGP_CAROLIEiJ_G0020965	Son	100	97.587	ENSOPRG00000005068	SON	96	98.267	Ochotona_princeps
MGP_CAROLIEiJ_G0020965	Son	100	98.899	ENSODEG00000003658	-	100	99.464	Octodon_degus
MGP_CAROLIEiJ_G0020965	Son	81	56.522	ENSONIG00000003775	-	79	57.393	Oreochromis_niloticus
MGP_CAROLIEiJ_G0020965	Son	90	46.860	ENSORLG00020014016	-	91	46.860	Oryzias_latipes_hni
MGP_CAROLIEiJ_G0020965	Son	94	50.234	ENSORLG00015016415	-	78	50.234	Oryzias_latipes_hsok
MGP_CAROLIEiJ_G0020965	Son	82	98.969	ENSOGAG00000027319	SON	82	81.349	Otolemur_garnettii
MGP_CAROLIEiJ_G0020965	Son	100	98.458	ENSPPAG00000033712	SON	100	99.464	Pan_paniscus
MGP_CAROLIEiJ_G0020965	Son	100	99.196	ENSPPRG00000019353	SON	100	99.464	Panthera_pardus
MGP_CAROLIEiJ_G0020965	Son	100	99.196	ENSPTIG00000017100	SON	100	99.464	Panthera_tigris_altaica
MGP_CAROLIEiJ_G0020965	Son	100	98.458	ENSPTRG00000052356	-	100	100.000	Pan_troglodytes
MGP_CAROLIEiJ_G0020965	Son	100	99.464	ENSPTRG00000013872	SON	100	99.464	Pan_troglodytes
MGP_CAROLIEiJ_G0020965	Son	100	99.464	ENSPANG00000024077	SON	100	99.464	Papio_anubis
MGP_CAROLIEiJ_G0020965	Son	96	73.529	ENSPSIG00000008097	-	100	77.561	Pelodiscus_sinensis
MGP_CAROLIEiJ_G0020965	Son	80	54.945	ENSPMGG00000015598	-	93	51.325	Periophthalmus_magnuspinnatus
MGP_CAROLIEiJ_G0020965	Son	100	96.256	ENSPCIG00000012884	-	100	97.855	Phascolarctos_cinereus
MGP_CAROLIEiJ_G0020965	Son	100	99.196	ENSPCOG00000015502	SON	100	99.196	Propithecus_coquereli
MGP_CAROLIEiJ_G0020965	Son	100	97.855	ENSPVAG00000011186	SON	92	97.842	Pteropus_vampyrus
MGP_CAROLIEiJ_G0020965	Son	100	98.458	ENSRBIG00000044269	-	100	100.000	Rhinopithecus_bieti
MGP_CAROLIEiJ_G0020965	Son	100	99.464	ENSRROG00000042156	SON	100	99.464	Rhinopithecus_roxellana
MGP_CAROLIEiJ_G0020965	Son	100	99.464	ENSSBOG00000020885	SON	100	99.464	Saimiri_boliviensis_boliviensis
MGP_CAROLIEiJ_G0020965	Son	100	90.349	ENSSHAG00000008266	SON	100	91.283	Sarcophilus_harrisii
MGP_CAROLIEiJ_G0020965	Son	100	95.225	ENSSARG00000012369	SON	62	94.474	Sorex_araneus
MGP_CAROLIEiJ_G0020965	Son	95	69.635	ENSTGUG00000000486	-	100	72.927	Taeniopygia_guttata
MGP_CAROLIEiJ_G0020965	Son	98	52.759	ENSTNIG00000014468	-	98	53.289	Tetraodon_nigroviridis
MGP_CAROLIEiJ_G0020965	Son	80	99.507	ENSTBEG00000003193	SON	76	99.595	Tupaia_belangeri
MGP_CAROLIEiJ_G0020965	Son	94	98.182	ENSTTRG00000004692	SON	76	84.823	Tursiops_truncatus
MGP_CAROLIEiJ_G0020965	Son	94	95.174	ENSVPAG00000009150	SON	78	96.040	Vicugna_pacos
MGP_CAROLIEiJ_G0020965	Son	98	96.986	ENSVVUG00000022974	SON	79	82.270	Vulpes_vulpes
MGP_CAROLIEiJ_G0020965	Son	80	72.011	ENSXETG00000014115	son	94	69.565	Xenopus_tropicalis