EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_CAROLIEiJ_G0021045 (Gene tree)
Gene ID: 110284098
Gene Symbol: Pnldc1
Alias: LOC240023
Full Name: PARN like%2C ribonuclease domain containing 1
Gene Type: protein_coding
Species: Mus_caroli
Status: putative
Strand: Plus strand
Length: 19765 bases
Position: chr17:4040712-4060476
Accession: 110284098
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CAROLIEiJ_P0042659	CAF1	PF04857.20	4.1e-79	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CAROLIEiJ_T0042659	-	1689	XM_021149724	MGP_CAROLIEiJ_P0042659	531 (aa)	XP_021005383	UPI000A316D9C

Gene Model

Click here to download MGP_CAROLIEiJ_G0021045's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CAROLIEiJ_G0021045's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_CAROLIEiJ_G0021045	Pnldc1	99	85.985	ENSG00000146453	PNLDC1	99	85.985	Homo_sapiens
MGP_CAROLIEiJ_G0021045	Pnldc1	99	85.822	ENSAMEG00000015371	PNLDC1	99	85.822	Ailuropoda_melanoleuca
MGP_CAROLIEiJ_G0021045	Pnldc1	95	59.064	ENSAPLG00000007014	PNLDC1	98	59.064	Anas_platyrhynchos
MGP_CAROLIEiJ_G0021045	Pnldc1	99	59.659	ENSACAG00000013667	PNLDC1	99	59.659	Anolis_carolinensis
MGP_CAROLIEiJ_G0021045	Pnldc1	100	85.311	ENSANAG00000034713	PNLDC1	100	86.301	Aotus_nancymaae
MGP_CAROLIEiJ_G0021045	Pnldc1	95	86.879	ENSBTAG00000015166	PNLDC1	95	86.879	Bos_taurus
MGP_CAROLIEiJ_G0021045	Pnldc1	100	84.181	ENSCJAG00000011865	PNLDC1	100	84.181	Callithrix_jacchus
MGP_CAROLIEiJ_G0021045	Pnldc1	100	87.382	ENSCAFG00000000740	PNLDC1	100	87.382	Canis_familiaris
MGP_CAROLIEiJ_G0021045	Pnldc1	100	84.991	ENSCAFG00020017742	PNLDC1	100	84.991	Canis_lupus_dingo
MGP_CAROLIEiJ_G0021045	Pnldc1	100	84.398	ENSCHIG00000003141	PNLDC1	100	84.398	Capra_hircus
MGP_CAROLIEiJ_G0021045	Pnldc1	100	83.427	ENSTSYG00000005606	PNLDC1	100	83.427	Carlito_syrichta
MGP_CAROLIEiJ_G0021045	Pnldc1	100	62.406	ENSCAPG00000011893	PNLDC1	100	62.406	Cavia_aperea
MGP_CAROLIEiJ_G0021045	Pnldc1	100	79.323	ENSCPOG00000019565	PNLDC1	100	79.323	Cavia_porcellus
MGP_CAROLIEiJ_G0021045	Pnldc1	100	85.499	ENSCCAG00000026232	PNLDC1	100	85.499	Cebus_capucinus
MGP_CAROLIEiJ_G0021045	Pnldc1	100	85.499	ENSCATG00000033196	PNLDC1	100	85.499	Cercocebus_atys
MGP_CAROLIEiJ_G0021045	Pnldc1	99	85.606	ENSCLAG00000003228	PNLDC1	99	85.606	Chinchilla_lanigera
MGP_CAROLIEiJ_G0021045	Pnldc1	95	84.283	ENSCSAG00000012478	PNLDC1	98	84.283	Chlorocebus_sabaeus
MGP_CAROLIEiJ_G0021045	Pnldc1	96	65.234	ENSCPBG00000004050	PNLDC1	100	65.234	Chrysemys_picta_bellii
MGP_CAROLIEiJ_G0021045	Pnldc1	95	85.178	ENSCANG00000043076	PNLDC1	97	85.178	Colobus_angolensis_palliatus
MGP_CAROLIEiJ_G0021045	Pnldc1	100	69.115	ENSCGRG00001011981	-	99	69.115	Cricetulus_griseus_chok1gshd
MGP_CAROLIEiJ_G0021045	Pnldc1	100	86.064	ENSCGRG00001007470	-	99	86.064	Cricetulus_griseus_chok1gshd
MGP_CAROLIEiJ_G0021045	Pnldc1	100	71.186	ENSCGRG00000003103	-	99	71.186	Cricetulus_griseus_crigri
MGP_CAROLIEiJ_G0021045	Pnldc1	100	86.064	ENSCGRG00000010221	-	99	86.064	Cricetulus_griseus_crigri
MGP_CAROLIEiJ_G0021045	Pnldc1	100	85.150	ENSDNOG00000013709	PNLDC1	100	85.150	Dasypus_novemcinctus
MGP_CAROLIEiJ_G0021045	Pnldc1	100	80.150	ENSDORG00000011517	Pnldc1	99	88.179	Dipodomys_ordii
MGP_CAROLIEiJ_G0021045	Pnldc1	93	76.113	ENSETEG00000007587	PNLDC1	99	76.113	Echinops_telfairi
MGP_CAROLIEiJ_G0021045	Pnldc1	97	30.682	ENSEBUG00000008118	PNLDC1	97	30.682	Eptatretus_burgeri
MGP_CAROLIEiJ_G0021045	Pnldc1	100	78.519	ENSEASG00005019029	PNLDC1	100	78.519	Equus_asinus_asinus
MGP_CAROLIEiJ_G0021045	Pnldc1	100	86.441	ENSECAG00000012898	PNLDC1	100	86.441	Equus_caballus
MGP_CAROLIEiJ_G0021045	Pnldc1	67	75.000	ENSEEUG00000005717	-	86	75.000	Erinaceus_europaeus
MGP_CAROLIEiJ_G0021045	Pnldc1	100	87.194	ENSFCAG00000002848	PNLDC1	100	87.194	Felis_catus
MGP_CAROLIEiJ_G0021045	Pnldc1	94	57.455	ENSFALG00000012081	PNLDC1	99	57.455	Ficedula_albicollis
MGP_CAROLIEiJ_G0021045	Pnldc1	100	86.064	ENSFDAG00000021334	PNLDC1	100	86.064	Fukomys_damarensis
MGP_CAROLIEiJ_G0021045	Pnldc1	79	59.620	ENSGALG00000011624	PNLDC1	82	59.620	Gallus_gallus
MGP_CAROLIEiJ_G0021045	Pnldc1	99	65.720	ENSGAGG00000015276	PNLDC1	100	66.942	Gopherus_agassizii
MGP_CAROLIEiJ_G0021045	Pnldc1	100	85.499	ENSGGOG00000014077	PNLDC1	100	85.499	Gorilla_gorilla
MGP_CAROLIEiJ_G0021045	Pnldc1	100	87.006	ENSHGLG00000006889	PNLDC1	100	87.006	Heterocephalus_glaber_female
MGP_CAROLIEiJ_G0021045	Pnldc1	100	87.006	ENSHGLG00100018275	PNLDC1	100	87.006	Heterocephalus_glaber_male
MGP_CAROLIEiJ_G0021045	Pnldc1	99	89.015	ENSSTOG00000005595	PNLDC1	99	89.015	Ictidomys_tridecemlineatus
MGP_CAROLIEiJ_G0021045	Pnldc1	99	83.743	ENSJJAG00000009937	Pnldc1	99	83.743	Jaculus_jaculus
MGP_CAROLIEiJ_G0021045	Pnldc1	59	85.714	ENSLAFG00000030189	PNLDC1	92	85.714	Loxodonta_africana
MGP_CAROLIEiJ_G0021045	Pnldc1	100	85.499	ENSMFAG00000041296	PNLDC1	100	85.499	Macaca_fascicularis
MGP_CAROLIEiJ_G0021045	Pnldc1	100	85.499	ENSMMUG00000004181	PNLDC1	100	85.499	Macaca_mulatta
MGP_CAROLIEiJ_G0021045	Pnldc1	100	85.311	ENSMNEG00000034271	PNLDC1	100	85.311	Macaca_nemestrina
MGP_CAROLIEiJ_G0021045	Pnldc1	100	82.298	ENSMLEG00000044059	PNLDC1	100	82.298	Mandrillus_leucophaeus
MGP_CAROLIEiJ_G0021045	Pnldc1	95	58.300	ENSMGAG00000012470	PNLDC1	97	58.300	Meleagris_gallopavo
MGP_CAROLIEiJ_G0021045	Pnldc1	99	69.057	ENSMAUG00000012298	Pnldc1	100	69.057	Mesocricetus_auratus
MGP_CAROLIEiJ_G0021045	Pnldc1	100	86.064	ENSMICG00000008021	PNLDC1	100	86.064	Microcebus_murinus
MGP_CAROLIEiJ_G0021045	Pnldc1	100	93.433	ENSMOCG00000014287	Pnldc1	100	93.433	Microtus_ochrogaster
MGP_CAROLIEiJ_G0021045	Pnldc1	99	75.901	ENSMODG00000007420	PNLDC1	99	75.901	Monodelphis_domestica
MGP_CAROLIEiJ_G0021045	Pnldc1	100	98.305	ENSMUSG00000073460	Pnldc1	100	98.467	Mus_musculus
MGP_CAROLIEiJ_G0021045	Pnldc1	100	96.987	MGP_PahariEiJ_G0023361	Pnldc1	100	96.987	Mus_pahari
MGP_CAROLIEiJ_G0021045	Pnldc1	100	98.117	MGP_SPRETEiJ_G0021975	Pnldc1	100	98.117	Mus_spretus
MGP_CAROLIEiJ_G0021045	Pnldc1	99	87.713	ENSMPUG00000004920	PNLDC1	99	87.713	Mustela_putorius_furo
MGP_CAROLIEiJ_G0021045	Pnldc1	100	85.876	ENSMLUG00000000747	PNLDC1	100	85.876	Myotis_lucifugus
MGP_CAROLIEiJ_G0021045	Pnldc1	100	94.350	ENSNGAG00000017714	Pnldc1	99	94.350	Nannospalax_galili
MGP_CAROLIEiJ_G0021045	Pnldc1	97	83.527	ENSNLEG00000011282	PNLDC1	99	83.527	Nomascus_leucogenys
MGP_CAROLIEiJ_G0021045	Pnldc1	60	62.500	ENSMEUG00000011926	-	64	62.500	Notamacropus_eugenii
MGP_CAROLIEiJ_G0021045	Pnldc1	54	65.625	ENSMEUG00000014042	-	100	65.625	Notamacropus_eugenii
MGP_CAROLIEiJ_G0021045	Pnldc1	79	86.364	ENSOPRG00000003813	PNLDC1	79	86.364	Ochotona_princeps
MGP_CAROLIEiJ_G0021045	Pnldc1	100	86.064	ENSODEG00000008047	PNLDC1	100	86.064	Octodon_degus
MGP_CAROLIEiJ_G0021045	Pnldc1	99	58.302	ENSOANG00000012199	PNLDC1	99	59.546	Ornithorhynchus_anatinus
MGP_CAROLIEiJ_G0021045	Pnldc1	100	86.441	ENSOCUG00000013867	PNLDC1	100	86.441	Oryctolagus_cuniculus
MGP_CAROLIEiJ_G0021045	Pnldc1	99	87.311	ENSOGAG00000007331	PNLDC1	99	87.311	Otolemur_garnettii
MGP_CAROLIEiJ_G0021045	Pnldc1	100	84.369	ENSOARG00000004585	PNLDC1	100	84.369	Ovis_aries
MGP_CAROLIEiJ_G0021045	Pnldc1	100	85.311	ENSPPAG00000026651	PNLDC1	100	85.311	Pan_paniscus
MGP_CAROLIEiJ_G0021045	Pnldc1	100	87.194	ENSPPRG00000012854	PNLDC1	100	87.194	Panthera_pardus
MGP_CAROLIEiJ_G0021045	Pnldc1	99	82.008	ENSPTIG00000011501	PNLDC1	99	82.008	Panthera_tigris_altaica
MGP_CAROLIEiJ_G0021045	Pnldc1	100	85.311	ENSPTRG00000018762	PNLDC1	100	85.311	Pan_troglodytes
MGP_CAROLIEiJ_G0021045	Pnldc1	100	85.687	ENSPANG00000022009	PNLDC1	100	85.687	Papio_anubis
MGP_CAROLIEiJ_G0021045	Pnldc1	100	94.915	ENSPEMG00000016301	Pnldc1	99	94.915	Peromyscus_maniculatus_bairdii
MGP_CAROLIEiJ_G0021045	Pnldc1	83	77.677	ENSPCIG00000023412	PNLDC1	100	77.677	Phascolarctos_cinereus
MGP_CAROLIEiJ_G0021045	Pnldc1	100	80.639	ENSPPYG00000017148	PNLDC1	100	80.639	Pongo_abelii
MGP_CAROLIEiJ_G0021045	Pnldc1	99	77.883	ENSPCAG00000014169	PNLDC1	99	77.883	Procavia_capensis
MGP_CAROLIEiJ_G0021045	Pnldc1	100	87.006	ENSPCOG00000025722	PNLDC1	100	87.006	Propithecus_coquereli
MGP_CAROLIEiJ_G0021045	Pnldc1	70	30.000	ENSPVAG00000002547	PARN	62	30.000	Pteropus_vampyrus
MGP_CAROLIEiJ_G0021045	Pnldc1	73	90.909	ENSPVAG00000005325	PNLDC1	73	90.909	Pteropus_vampyrus
MGP_CAROLIEiJ_G0021045	Pnldc1	100	97.363	ENSRNOG00000023140	Pnldc1	100	97.363	Rattus_norvegicus
MGP_CAROLIEiJ_G0021045	Pnldc1	100	85.687	ENSRBIG00000033806	PNLDC1	100	85.687	Rhinopithecus_bieti
MGP_CAROLIEiJ_G0021045	Pnldc1	95	85.573	ENSRROG00000043919	PNLDC1	97	85.573	Rhinopithecus_roxellana
MGP_CAROLIEiJ_G0021045	Pnldc1	100	85.499	ENSSBOG00000019135	PNLDC1	100	85.499	Saimiri_boliviensis_boliviensis
MGP_CAROLIEiJ_G0021045	Pnldc1	95	76.726	ENSSHAG00000015192	PNLDC1	97	76.726	Sarcophilus_harrisii
MGP_CAROLIEiJ_G0021045	Pnldc1	54	66.084	ENSSPUG00000004627	PNLDC1	99	64.732	Sphenodon_punctatus
MGP_CAROLIEiJ_G0021045	Pnldc1	96	84.314	ENSSSCG00000004046	PNLDC1	99	84.314	Sus_scrofa
MGP_CAROLIEiJ_G0021045	Pnldc1	91	58.557	ENSTGUG00000011418	PNLDC1	99	58.557	Taeniopygia_guttata
MGP_CAROLIEiJ_G0021045	Pnldc1	96	74.902	ENSTBEG00000009131	PNLDC1	98	74.902	Tupaia_belangeri
MGP_CAROLIEiJ_G0021045	Pnldc1	73	83.161	ENSTTRG00000010409	PNLDC1	73	83.161	Tursiops_truncatus
MGP_CAROLIEiJ_G0021045	Pnldc1	99	72.913	ENSUAMG00000015783	PNLDC1	99	72.913	Ursus_americanus
MGP_CAROLIEiJ_G0021045	Pnldc1	95	78.193	ENSUMAG00000011903	PNLDC1	99	78.193	Ursus_maritimus
MGP_CAROLIEiJ_G0021045	Pnldc1	96	88.258	ENSVVUG00000006586	PNLDC1	99	86.858	Vulpes_vulpes