EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: MGP_CAROLIEiJ_G0021132 (Gene tree)
Gene ID: 110283649
Gene Symbol: Zfp948
Alias: BC049807
Full Name: zinc finger protein 420-like
Gene Type: protein_coding
Species: Mus_caroli
Status: putative
Strand: Plus strand
Length: 21598 bases
Position: chr17:17080516-17102113
Accession: 110283649
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CAROLIEiJ_P0042898	zf-C2H2	PF00096.26	8.6e-72	1	14
MGP_CAROLIEiJ_P0042898	zf-C2H2	PF00096.26	8.6e-72	2	14
MGP_CAROLIEiJ_P0042898	zf-C2H2	PF00096.26	8.6e-72	3	14
MGP_CAROLIEiJ_P0042898	zf-C2H2	PF00096.26	8.6e-72	4	14
MGP_CAROLIEiJ_P0042898	zf-C2H2	PF00096.26	8.6e-72	5	14
MGP_CAROLIEiJ_P0042898	zf-C2H2	PF00096.26	8.6e-72	6	14
MGP_CAROLIEiJ_P0042898	zf-C2H2	PF00096.26	8.6e-72	7	14
MGP_CAROLIEiJ_P0042898	zf-C2H2	PF00096.26	8.6e-72	8	14
MGP_CAROLIEiJ_P0042898	zf-C2H2	PF00096.26	8.6e-72	9	14
MGP_CAROLIEiJ_P0042898	zf-C2H2	PF00096.26	8.6e-72	10	14
MGP_CAROLIEiJ_P0042898	zf-C2H2	PF00096.26	8.6e-72	11	14
MGP_CAROLIEiJ_P0042898	zf-C2H2	PF00096.26	8.6e-72	12	14
MGP_CAROLIEiJ_P0042898	zf-C2H2	PF00096.26	8.6e-72	13	14
MGP_CAROLIEiJ_P0042898	zf-C2H2	PF00096.26	8.6e-72	14	14
MGP_CAROLIEiJ_P0042898	zf-met	PF12874.7	0.00059	1	2
MGP_CAROLIEiJ_P0042898	zf-met	PF12874.7	0.00059	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CAROLIEiJ_T0042898	-	2523	-	MGP_CAROLIEiJ_P0042898	634 (aa)	XP_021004715	UPI000A31AA61

Gene Model

Click here to download MGP_CAROLIEiJ_G0021132's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CAROLIEiJ_G0021132's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CAROLIEiJ_G0021132	Zfp948	90	42.647	MGP_CAROLIEiJ_G0026744	Zbtb17	56	42.647
MGP_CAROLIEiJ_G0021132	Zfp948	99	45.217	MGP_CAROLIEiJ_G0030501	Zfp764	94	45.217
MGP_CAROLIEiJ_G0021132	Zfp948	99	45.217	MGP_CAROLIEiJ_G0030502	-	94	45.217
MGP_CAROLIEiJ_G0021132	Zfp948	74	41.284	MGP_CAROLIEiJ_G0022445	Zfp236	79	41.284
MGP_CAROLIEiJ_G0021132	Zfp948	99	48.374	MGP_CAROLIEiJ_G0024261	Zfp661	99	48.374
MGP_CAROLIEiJ_G0021132	Zfp948	94	38.498	MGP_CAROLIEiJ_G0016391	Zfp672	82	51.220
MGP_CAROLIEiJ_G0021132	Zfp948	92	33.703	MGP_CAROLIEiJ_G0028343	Repin1	92	32.021
MGP_CAROLIEiJ_G0021132	Zfp948	92	47.445	MGP_CAROLIEiJ_G0030498	Zfp768	51	47.445
MGP_CAROLIEiJ_G0021132	Zfp948	74	34.343	MGP_CAROLIEiJ_G0014667	Zbtb41	68	34.343
MGP_CAROLIEiJ_G0021132	Zfp948	78	35.111	MGP_CAROLIEiJ_G0031420	Zfp319	91	34.504
MGP_CAROLIEiJ_G0021132	Zfp948	74	42.520	MGP_CAROLIEiJ_G0027508	Gfi1	100	42.520
MGP_CAROLIEiJ_G0021132	Zfp948	99	46.325	MGP_CAROLIEiJ_G0015655	-	94	46.325
MGP_CAROLIEiJ_G0021132	Zfp948	96	37.296	MGP_CAROLIEiJ_G0031203	Zfp882	99	40.618
MGP_CAROLIEiJ_G0021132	Zfp948	99	40.794	MGP_CAROLIEiJ_G0028463	Prdm5	75	40.794
MGP_CAROLIEiJ_G0021132	Zfp948	72	47.619	MGP_CAROLIEiJ_G0016622	Bcl6b	71	47.619
MGP_CAROLIEiJ_G0021132	Zfp948	98	37.500	MGP_CAROLIEiJ_G0020389	Zfp597	98	49.091
MGP_CAROLIEiJ_G0021132	Zfp948	91	44.159	MGP_CAROLIEiJ_G0029427	-	98	38.354
MGP_CAROLIEiJ_G0021132	Zfp948	81	43.979	MGP_CAROLIEiJ_G0027176	Zbtb49	67	46.377
MGP_CAROLIEiJ_G0021132	Zfp948	83	46.154	MGP_CAROLIEiJ_G0029135	Zfp628	60	46.154
MGP_CAROLIEiJ_G0021132	Zfp948	97	50.699	MGP_CAROLIEiJ_G0018683	Zfp493	99	50.699
MGP_CAROLIEiJ_G0021132	Zfp948	98	35.349	MGP_CAROLIEiJ_G0019949	Zfp251	96	35.771
MGP_CAROLIEiJ_G0021132	Zfp948	90	53.201	MGP_CAROLIEiJ_G0029490	Zfp420	98	50.905
MGP_CAROLIEiJ_G0021132	Zfp948	74	32.216	MGP_CAROLIEiJ_G0029356	Zfp574	95	30.936
MGP_CAROLIEiJ_G0021132	Zfp948	71	34.940	MGP_CAROLIEiJ_G0029146	Zfp784	77	34.940
MGP_CAROLIEiJ_G0021132	Zfp948	74	44.444	MGP_CAROLIEiJ_G0029143	-	81	33.094
MGP_CAROLIEiJ_G0021132	Zfp948	83	33.692	MGP_CAROLIEiJ_G0024724	Zfp64	69	32.360
MGP_CAROLIEiJ_G0021132	Zfp948	97	49.351	MGP_CAROLIEiJ_G0018660	-	70	49.351
MGP_CAROLIEiJ_G0021132	Zfp948	97	38.448	MGP_CAROLIEiJ_G0018661	Zfp759	99	38.710
MGP_CAROLIEiJ_G0021132	Zfp948	98	45.669	MGP_CAROLIEiJ_G0029329	Zfp94	97	45.669
MGP_CAROLIEiJ_G0021132	Zfp948	90	45.059	MGP_CAROLIEiJ_G0029327	Zfp93	72	45.059
MGP_CAROLIEiJ_G0021132	Zfp948	99	46.326	MGP_CAROLIEiJ_G0029326	Zfp108	99	44.800
MGP_CAROLIEiJ_G0021132	Zfp948	90	49.784	MGP_CAROLIEiJ_G0029324	Zfp111	79	49.784
MGP_CAROLIEiJ_G0021132	Zfp948	98	46.911	MGP_CAROLIEiJ_G0029322	Zfp235	99	51.987
MGP_CAROLIEiJ_G0021132	Zfp948	74	46.648	MGP_CAROLIEiJ_G0029321	Zfp112	55	46.648
MGP_CAROLIEiJ_G0021132	Zfp948	97	48.352	MGP_CAROLIEiJ_G0016437	Zfp867	84	48.352
MGP_CAROLIEiJ_G0021132	Zfp948	79	34.091	MGP_CAROLIEiJ_G0030525	Zfp646	82	33.750
MGP_CAROLIEiJ_G0021132	Zfp948	97	48.092	MGP_CAROLIEiJ_G0031579	Zfp1	99	48.092
MGP_CAROLIEiJ_G0021132	Zfp948	98	62.500	MGP_CAROLIEiJ_G0029612	Zfp141	62	62.500
MGP_CAROLIEiJ_G0021132	Zfp948	97	52.174	MGP_CAROLIEiJ_G0029614	Zfp715	70	52.174
MGP_CAROLIEiJ_G0021132	Zfp948	99	66.212	MGP_CAROLIEiJ_G0021128	Zfp51	96	67.405
MGP_CAROLIEiJ_G0021132	Zfp948	97	46.196	MGP_CAROLIEiJ_G0016306	Zfp354a	98	46.032
MGP_CAROLIEiJ_G0021132	Zfp948	89	45.318	MGP_CAROLIEiJ_G0018274	Zkscan4	54	45.318

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_CAROLIEiJ_G0021132	Zfp948	89	58.407	ENSCING00000003470	-	95	58.407	Ciona_intestinalis
MGP_CAROLIEiJ_G0021132	Zfp948	80	49.485	ENSCING00000018801	zf(c2h2)-138	93	49.485	Ciona_intestinalis
MGP_CAROLIEiJ_G0021132	Zfp948	90	46.690	ENSCSAVG00000010156	-	93	46.690	Ciona_savignyi
MGP_CAROLIEiJ_G0021132	Zfp948	92	51.203	ENSCGRG00001002297	-	99	51.203	Cricetulus_griseus_chok1gshd
MGP_CAROLIEiJ_G0021132	Zfp948	97	54.327	ENSCGRG00001007163	-	100	46.411	Cricetulus_griseus_chok1gshd
MGP_CAROLIEiJ_G0021132	Zfp948	90	57.783	ENSCGRG00001013602	-	98	51.718	Cricetulus_griseus_chok1gshd
MGP_CAROLIEiJ_G0021132	Zfp948	96	54.327	ENSCGRG00000000778	-	97	54.327	Cricetulus_griseus_crigri
MGP_CAROLIEiJ_G0021132	Zfp948	99	63.455	ENSCGRG00000018332	Zfp53	94	62.063	Cricetulus_griseus_crigri
MGP_CAROLIEiJ_G0021132	Zfp948	94	46.076	ENSEBUG00000012823	-	80	43.016	Eptatretus_burgeri
MGP_CAROLIEiJ_G0021132	Zfp948	90	43.820	ENSEBUG00000008792	-	96	43.820	Eptatretus_burgeri
MGP_CAROLIEiJ_G0021132	Zfp948	89	45.343	ENSEBUG00000016878	-	85	45.343	Eptatretus_burgeri
MGP_CAROLIEiJ_G0021132	Zfp948	89	44.836	ENSEBUG00000005655	-	94	42.246	Eptatretus_burgeri
MGP_CAROLIEiJ_G0021132	Zfp948	83	42.177	ENSEBUG00000001525	-	90	42.177	Eptatretus_burgeri
MGP_CAROLIEiJ_G0021132	Zfp948	91	42.222	ENSEBUG00000012454	-	95	42.222	Eptatretus_burgeri
MGP_CAROLIEiJ_G0021132	Zfp948	98	57.019	ENSMAUG00000005974	-	99	54.147	Mesocricetus_auratus
MGP_CAROLIEiJ_G0021132	Zfp948	99	52.806	ENSMAUG00000000939	-	97	52.806	Mesocricetus_auratus
MGP_CAROLIEiJ_G0021132	Zfp948	99	56.846	ENSMAUG00000004844	-	100	56.846	Mesocricetus_auratus
MGP_CAROLIEiJ_G0021132	Zfp948	98	63.744	ENSMOCG00000006946	Zfp53	98	61.194	Microtus_ochrogaster
MGP_CAROLIEiJ_G0021132	Zfp948	97	46.491	ENSMOCG00000007851	-	99	46.491	Microtus_ochrogaster
MGP_CAROLIEiJ_G0021132	Zfp948	99	59.400	ENSMUSG00000062743	Zfp677	100	59.400	Mus_musculus
MGP_CAROLIEiJ_G0021132	Zfp948	79	42.271	ENSPSIG00000009270	-	87	44.178	Pelodiscus_sinensis
MGP_CAROLIEiJ_G0021132	Zfp948	99	44.288	ENSPEMG00000023883	-	100	44.984	Peromyscus_maniculatus_bairdii
MGP_CAROLIEiJ_G0021132	Zfp948	99	45.540	ENSPEMG00000007241	-	100	45.122	Peromyscus_maniculatus_bairdii
MGP_CAROLIEiJ_G0021132	Zfp948	99	58.926	ENSRNOG00000052406	LOC102552527	99	58.926	Rattus_norvegicus