EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_CAROLIEiJ_G0021161 (Gene tree)
Gene ID: 110283890
Gene Symbol: Srrm2
Alias: 5033413A03Rik|SRm300
Full Name: serine/arginine repetitive matrix 2
Gene Type: protein_coding
Species: Mus_caroli
Status: putative
Strand: Plus strand
Length: 34671 bases
Position: chr17:19616883-19651553
Accession: 110283890
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CAROLIEiJ_P0042968	cwf21	PF08312.12	3.6e-11	1	1
MGP_CAROLIEiJ_P0042969	cwf21	PF08312.12	1.3e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CAROLIEiJ_T0042970	-	8709	-	MGP_CAROLIEiJ_P0042970	2606 (aa)	-	-
MGP_CAROLIEiJ_T0042971	-	459	-	MGP_CAROLIEiJ_P0042971	88 (aa)	-	UPI0004620EC3
MGP_CAROLIEiJ_T0042972	-	428	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0042973	-	488	-	MGP_CAROLIEiJ_P0042973	33 (aa)	-	-
MGP_CAROLIEiJ_T0042974	-	2102	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0042975	-	2988	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0042976	-	647	-	MGP_CAROLIEiJ_P0042976	104 (aa)	-	-
MGP_CAROLIEiJ_T0042977	-	597	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0042967	-	2118	-	MGP_CAROLIEiJ_P0042967	370 (aa)	-	-
MGP_CAROLIEiJ_T0042969	-	9009	XM_021149436	MGP_CAROLIEiJ_P0042969	2702 (aa)	XP_021005095	UPI000A319257
MGP_CAROLIEiJ_T0042968	-	950	-	MGP_CAROLIEiJ_P0042968	171 (aa)	-	UPI0004621176

Gene Model

Click here to download MGP_CAROLIEiJ_G0021161's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CAROLIEiJ_G0021161's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_CAROLIEiJ_G0021161	Srrm2	100	97.661	ENSG00000167978	SRRM2	100	98.261	Homo_sapiens
MGP_CAROLIEiJ_G0021161	Srrm2	88	58.824	ENSACIG00000023341	-	88	57.143	Amphilophus_citrinellus
MGP_CAROLIEiJ_G0021161	Srrm2	100	97.661	ENSANAG00000034911	SRRM2	68	82.387	Aotus_nancymaae
MGP_CAROLIEiJ_G0021161	Srrm2	89	58.065	ENSAMXG00000038994	-	90	51.309	Astyanax_mexicanus
MGP_CAROLIEiJ_G0021161	Srrm2	100	97.661	ENSCJAG00000015354	SRRM2	68	82.484	Callithrix_jacchus
MGP_CAROLIEiJ_G0021161	Srrm2	100	97.076	ENSCHIG00000011257	SRRM2	68	78.556	Capra_hircus
MGP_CAROLIEiJ_G0021161	Srrm2	91	78.344	ENSCPBG00000005984	-	95	76.891	Chrysemys_picta_bellii
MGP_CAROLIEiJ_G0021161	Srrm2	100	97.076	ENSCGRG00001012503	Srrm2	68	90.718	Cricetulus_griseus_chok1gshd
MGP_CAROLIEiJ_G0021161	Srrm2	100	97.076	ENSCGRG00000016285	Srrm2	68	90.610	Cricetulus_griseus_crigri
MGP_CAROLIEiJ_G0021161	Srrm2	88	59.091	ENSCSEG00000009971	-	92	51.813	Cynoglossus_semilaevis
MGP_CAROLIEiJ_G0021161	Srrm2	100	97.076	ENSDNOG00000048469	SRRM2	68	78.488	Dasypus_novemcinctus
MGP_CAROLIEiJ_G0021161	Srrm2	100	97.076	ENSETEG00000019959	SRRM2	81	81.153	Echinops_telfairi
MGP_CAROLIEiJ_G0021161	Srrm2	100	97.661	ENSEASG00005006019	SRRM2	94	90.252	Equus_asinus_asinus
MGP_CAROLIEiJ_G0021161	Srrm2	100	97.661	ENSECAG00000011612	SRRM2	67	73.110	Equus_caballus
MGP_CAROLIEiJ_G0021161	Srrm2	100	97.661	ENSFCAG00000004709	SRRM2	67	77.210	Felis_catus
MGP_CAROLIEiJ_G0021161	Srrm2	91	70.186	ENSGALG00000047953	-	75	67.000	Gallus_gallus
MGP_CAROLIEiJ_G0021161	Srrm2	72	43.200	ENSGACG00000020232	-	92	39.271	Gasterosteus_aculeatus
MGP_CAROLIEiJ_G0021161	Srrm2	56	55.208	ENSHGLG00100004269	-	59	68.182	Heterocephalus_glaber_male
MGP_CAROLIEiJ_G0021161	Srrm2	100	97.661	ENSSTOG00000025810	SRRM2	67	76.825	Ictidomys_tridecemlineatus
MGP_CAROLIEiJ_G0021161	Srrm2	88	58.710	ENSLBEG00000007729	-	86	57.055	Labrus_bergylta
MGP_CAROLIEiJ_G0021161	Srrm2	100	97.076	ENSLAFG00000000624	SRRM2	69	75.455	Loxodonta_africana
MGP_CAROLIEiJ_G0021161	Srrm2	100	97.661	ENSMMUG00000018858	SRRM2	68	80.329	Macaca_mulatta
MGP_CAROLIEiJ_G0021161	Srrm2	100	97.076	ENSMICG00000046582	SRRM2	68	82.696	Microcebus_murinus
MGP_CAROLIEiJ_G0021161	Srrm2	100	97.661	ENSMOCG00000022507	Srrm2	63	87.170	Microtus_ochrogaster
MGP_CAROLIEiJ_G0021161	Srrm2	100	97.076	ENSMODG00000016533	SRRM2	94	79.258	Monodelphis_domestica
MGP_CAROLIEiJ_G0021161	Srrm2	100	100.000	ENSMUSG00000039218	Srrm2	100	100.000	Mus_musculus
MGP_CAROLIEiJ_G0021161	Srrm2	100	98.830	MGP_PahariEiJ_G0023478	Srrm2	100	98.830	Mus_pahari
MGP_CAROLIEiJ_G0021161	Srrm2	100	100.000	MGP_SPRETEiJ_G0022071	Srrm2	100	100.000	Mus_spretus
MGP_CAROLIEiJ_G0021161	Srrm2	57	54.639	ENSNGAG00000005825	-	72	54.639	Nannospalax_galili
MGP_CAROLIEiJ_G0021161	Srrm2	100	98.246	ENSNGAG00000021633	Srrm2	68	84.744	Nannospalax_galili
MGP_CAROLIEiJ_G0021161	Srrm2	100	97.661	ENSNLEG00000009466	SRRM2	91	91.518	Nomascus_leucogenys
MGP_CAROLIEiJ_G0021161	Srrm2	100	97.076	ENSODEG00000013605	SRRM2	66	74.293	Octodon_degus
MGP_CAROLIEiJ_G0021161	Srrm2	100	97.076	ENSOGAG00000032989	SRRM2	69	82.484	Otolemur_garnettii
MGP_CAROLIEiJ_G0021161	Srrm2	88	61.688	ENSPMGG00000000733	-	92	53.886	Periophthalmus_magnuspinnatus
MGP_CAROLIEiJ_G0021161	Srrm2	100	97.661	ENSPEMG00000011170	Srrm2	68	91.901	Peromyscus_maniculatus_bairdii
MGP_CAROLIEiJ_G0021161	Srrm2	100	87.719	ENSPCAG00000009687	-	75	76.714	Procavia_capensis
MGP_CAROLIEiJ_G0021161	Srrm2	100	97.076	ENSPCOG00000016593	SRRM2	68	82.962	Propithecus_coquereli
MGP_CAROLIEiJ_G0021161	Srrm2	76	49.231	ENSPNYG00000009463	-	88	42.353	Pundamilia_nyererei
MGP_CAROLIEiJ_G0021161	Srrm2	89	58.065	ENSPNAG00000018911	-	91	51.295	Pygocentrus_nattereri
MGP_CAROLIEiJ_G0021161	Srrm2	100	98.246	ENSRNOG00000058561	Srrm2	99	96.012	Rattus_norvegicus
MGP_CAROLIEiJ_G0021161	Srrm2	100	97.661	ENSRBIG00000033934	SRRM2	67	80.435	Rhinopithecus_bieti
MGP_CAROLIEiJ_G0021161	Srrm2	100	96.491	ENSSHAG00000017712	SRRM2	94	78.846	Sarcophilus_harrisii
MGP_CAROLIEiJ_G0021161	Srrm2	88	58.065	ENSSLDG00000003595	-	79	52.062	Seriola_lalandi_dorsalis
MGP_CAROLIEiJ_G0021161	Srrm2	68	73.504	ENSSPUG00000003428	-	100	73.504	Sphenodon_punctatus
MGP_CAROLIEiJ_G0021161	Srrm2	58	97.980	ENSTBEG00000006307	-	62	97.980	Tupaia_belangeri
MGP_CAROLIEiJ_G0021161	Srrm2	100	97.076	ENSTTRG00000015432	SRRM2	58	97.076	Tursiops_truncatus
MGP_CAROLIEiJ_G0021161	Srrm2	100	97.661	ENSVVUG00000008770	SRRM2	92	82.544	Vulpes_vulpes
MGP_CAROLIEiJ_G0021161	Srrm2	88	59.477	ENSXCOG00000000148	-	92	52.083	Xiphophorus_couchianus