EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_CAROLIEiJ_G0021201 (Gene tree)
Gene ID: 110312525
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Mus_caroli
Status: putative
Strand: Plus strand
Length: 4333 bases
Position: chr17:20551908-20556240
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CAROLIEiJ_P0043115	Ribosomal_S5	PF00333.20	2e-28	1	1
MGP_CAROLIEiJ_P0043116	Ribosomal_S5	PF00333.20	2.4e-28	1	1
MGP_CAROLIEiJ_P0043117	Ribosomal_S5	PF00333.20	2.4e-28	1	1
MGP_CAROLIEiJ_P0043118	Ribosomal_S5	PF00333.20	2.6e-28	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CAROLIEiJ_T0043120	-	392	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0043119	-	827	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0043118	-	824	-	MGP_CAROLIEiJ_P0043118	256 (aa)	-	-
MGP_CAROLIEiJ_T0043115	-	897	-	MGP_CAROLIEiJ_P0043115	223 (aa)	-	-
MGP_CAROLIEiJ_T0043117	-	964	-	MGP_CAROLIEiJ_P0043117	247 (aa)	-	-
MGP_CAROLIEiJ_T0043116	-	860	-	MGP_CAROLIEiJ_P0043116	247 (aa)	-	-

Gene Model

Click here to download MGP_CAROLIEiJ_G0021201's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CAROLIEiJ_G0021201's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_CAROLIEiJ_G0021201	-	72	97.516	ENSG00000140988	RPS2	100	97.727	Homo_sapiens
MGP_CAROLIEiJ_G0021201	-	60	96.992	ENSAMEG00000007366	-	100	96.992	Ailuropoda_melanoleuca
MGP_CAROLIEiJ_G0021201	-	72	84.663	ENSANAG00000034074	-	99	50.000	Aotus_nancymaae
MGP_CAROLIEiJ_G0021201	-	65	96.575	ENSANAG00000022295	-	82	96.273	Aotus_nancymaae
MGP_CAROLIEiJ_G0021201	-	65	93.836	ENSANAG00000031752	-	86	93.789	Aotus_nancymaae
MGP_CAROLIEiJ_G0021201	-	62	70.290	ENSBTAG00000053607	-	73	81.053	Bos_taurus
MGP_CAROLIEiJ_G0021201	-	72	98.137	ENSBTAG00000009535	RPS2	60	98.137	Bos_taurus
MGP_CAROLIEiJ_G0021201	-	72	96.894	ENSCJAG00000015267	RPS2	82	96.894	Callithrix_jacchus
MGP_CAROLIEiJ_G0021201	-	52	94.783	ENSCJAG00000040684	-	59	96.296	Callithrix_jacchus
MGP_CAROLIEiJ_G0021201	-	72	96.894	ENSCJAG00000047491	-	83	96.894	Callithrix_jacchus
MGP_CAROLIEiJ_G0021201	-	72	98.758	ENSCAFG00000019472	-	55	98.758	Canis_familiaris
MGP_CAROLIEiJ_G0021201	-	72	77.019	ENSCAFG00000005045	-	59	87.037	Canis_familiaris
MGP_CAROLIEiJ_G0021201	-	72	98.758	ENSCAFG00020026327	-	54	97.619	Canis_lupus_dingo
MGP_CAROLIEiJ_G0021201	-	72	92.547	ENSCHIG00000010903	-	54	92.547	Capra_hircus
MGP_CAROLIEiJ_G0021201	-	72	98.137	ENSCHIG00000022194	-	55	98.137	Capra_hircus
MGP_CAROLIEiJ_G0021201	-	72	96.273	ENSCHIG00000023272	-	54	96.273	Capra_hircus
MGP_CAROLIEiJ_G0021201	-	72	74.233	ENSTSYG00000007543	-	73	73.913	Carlito_syrichta
MGP_CAROLIEiJ_G0021201	-	72	97.516	ENSTSYG00000013466	-	82	97.516	Carlito_syrichta
MGP_CAROLIEiJ_G0021201	-	72	88.820	ENSTSYG00000032875	-	61	93.162	Carlito_syrichta
MGP_CAROLIEiJ_G0021201	-	53	88.235	ENSCAPG00000015998	-	58	91.765	Cavia_aperea
MGP_CAROLIEiJ_G0021201	-	72	98.758	ENSCPOG00000011651	-	55	98.758	Cavia_porcellus
MGP_CAROLIEiJ_G0021201	-	51	90.265	ENSCPOG00000021511	-	65	91.011	Cavia_porcellus
MGP_CAROLIEiJ_G0021201	-	50	90.179	ENSCCAG00000022740	-	75	68.987	Cebus_capucinus
MGP_CAROLIEiJ_G0021201	-	58	79.845	ENSCCAG00000027944	-	57	91.667	Cebus_capucinus
MGP_CAROLIEiJ_G0021201	-	72	97.516	ENSCATG00000040770	RPS2	81	97.516	Cercocebus_atys
MGP_CAROLIEiJ_G0021201	-	72	99.379	ENSCLAG00000016080	-	63	99.379	Chinchilla_lanigera
MGP_CAROLIEiJ_G0021201	-	72	91.925	ENSCSAG00000019620	-	55	91.925	Chlorocebus_sabaeus
MGP_CAROLIEiJ_G0021201	-	72	95.652	ENSCSAG00000018433	-	55	95.652	Chlorocebus_sabaeus
MGP_CAROLIEiJ_G0021201	-	72	97.516	ENSCSAG00000011216	RPS2	55	97.516	Chlorocebus_sabaeus
MGP_CAROLIEiJ_G0021201	-	72	97.516	ENSCSAG00000000532	-	55	97.516	Chlorocebus_sabaeus
MGP_CAROLIEiJ_G0021201	-	69	89.610	ENSCSAG00000018979	-	53	89.610	Chlorocebus_sabaeus
MGP_CAROLIEiJ_G0021201	-	72	78.261	ENSCANG00000037678	-	71	85.000	Colobus_angolensis_palliatus
MGP_CAROLIEiJ_G0021201	-	72	100.000	ENSCGRG00001023670	Rps2	55	100.000	Cricetulus_griseus_chok1gshd
MGP_CAROLIEiJ_G0021201	-	72	100.000	ENSCGRG00000014991	Rps2	55	100.000	Cricetulus_griseus_crigri
MGP_CAROLIEiJ_G0021201	-	72	84.472	ENSCGRG00000011461	-	53	84.472	Cricetulus_griseus_crigri
MGP_CAROLIEiJ_G0021201	-	72	97.516	ENSDNOG00000042334	-	73	97.516	Dasypus_novemcinctus
MGP_CAROLIEiJ_G0021201	-	72	99.379	ENSDORG00000007375	Rps2	55	99.379	Dipodomys_ordii
MGP_CAROLIEiJ_G0021201	-	72	68.944	ENSDORG00000026180	-	56	68.944	Dipodomys_ordii
MGP_CAROLIEiJ_G0021201	-	53	89.076	ENSEBUG00000016801	rps2	53	75.776	Eptatretus_burgeri
MGP_CAROLIEiJ_G0021201	-	72	98.758	ENSEASG00005004630	-	55	98.758	Equus_asinus_asinus
MGP_CAROLIEiJ_G0021201	-	72	98.758	ENSECAG00000009065	RPS2	55	98.758	Equus_caballus
MGP_CAROLIEiJ_G0021201	-	72	98.137	ENSFCAG00000029191	RPS2	73	98.137	Felis_catus
MGP_CAROLIEiJ_G0021201	-	72	92.547	ENSFALG00000003370	RPS2	52	92.547	Ficedula_albicollis
MGP_CAROLIEiJ_G0021201	-	72	92.547	ENSGALG00000005490	RPS2	54	92.547	Gallus_gallus
MGP_CAROLIEiJ_G0021201	-	72	94.410	ENSGGOG00000024510	-	55	94.410	Gorilla_gorilla
MGP_CAROLIEiJ_G0021201	-	72	97.516	ENSGGOG00000009371	-	82	97.516	Gorilla_gorilla
MGP_CAROLIEiJ_G0021201	-	72	98.758	ENSHGLG00000002542	-	59	98.758	Heterocephalus_glaber_female
MGP_CAROLIEiJ_G0021201	-	72	99.379	ENSSTOG00000012944	-	59	99.379	Ictidomys_tridecemlineatus
MGP_CAROLIEiJ_G0021201	-	61	94.161	ENSJJAG00000000108	-	54	97.222	Jaculus_jaculus
MGP_CAROLIEiJ_G0021201	-	72	100.000	ENSJJAG00000011197	Rps2	55	100.000	Jaculus_jaculus
MGP_CAROLIEiJ_G0021201	-	56	99.200	ENSMFAG00000003267	-	51	99.200	Macaca_fascicularis
MGP_CAROLIEiJ_G0021201	-	72	97.516	ENSMFAG00000002939	RPS2	82	97.516	Macaca_fascicularis
MGP_CAROLIEiJ_G0021201	-	72	90.683	ENSMFAG00000044597	-	82	90.683	Macaca_fascicularis
MGP_CAROLIEiJ_G0021201	-	72	97.516	ENSMMUG00000048170	-	83	97.516	Macaca_mulatta
MGP_CAROLIEiJ_G0021201	-	72	86.335	ENSMMUG00000017691	-	83	86.335	Macaca_mulatta
MGP_CAROLIEiJ_G0021201	-	72	86.335	ENSMMUG00000032562	-	79	86.335	Macaca_mulatta
MGP_CAROLIEiJ_G0021201	-	72	88.820	ENSMMUG00000047235	-	66	88.820	Macaca_mulatta
MGP_CAROLIEiJ_G0021201	-	72	97.516	ENSMMUG00000029267	-	82	97.516	Macaca_mulatta
MGP_CAROLIEiJ_G0021201	-	72	76.398	ENSMNEG00000041669	-	78	92.405	Macaca_nemestrina
MGP_CAROLIEiJ_G0021201	-	68	84.768	ENSMNEG00000035237	-	54	99.074	Macaca_nemestrina
MGP_CAROLIEiJ_G0021201	-	72	72.671	ENSMNEG00000026629	-	54	80.556	Macaca_nemestrina
MGP_CAROLIEiJ_G0021201	-	99	54.815	ENSMNEG00000032124	-	76	57.143	Macaca_nemestrina
MGP_CAROLIEiJ_G0021201	-	72	90.625	ENSMLEG00000044157	-	77	90.625	Mandrillus_leucophaeus
MGP_CAROLIEiJ_G0021201	-	65	73.793	ENSMLEG00000029614	-	80	94.565	Mandrillus_leucophaeus
MGP_CAROLIEiJ_G0021201	-	64	89.510	ENSMAUG00000008742	-	90	89.510	Mesocricetus_auratus
MGP_CAROLIEiJ_G0021201	-	76	98.137	ENSMICG00000012765	-	82	98.137	Microcebus_murinus
MGP_CAROLIEiJ_G0021201	-	72	100.000	ENSMOCG00000014200	-	55	100.000	Microtus_ochrogaster
MGP_CAROLIEiJ_G0021201	-	72	98.758	ENSMOCG00000009968	-	55	98.758	Microtus_ochrogaster
MGP_CAROLIEiJ_G0021201	-	72	98.758	ENSMOCG00000007773	-	55	98.758	Microtus_ochrogaster
MGP_CAROLIEiJ_G0021201	-	72	90.683	ENSMOCG00000004220	-	53	90.683	Microtus_ochrogaster
MGP_CAROLIEiJ_G0021201	-	72	96.319	ENSMOCG00000001418	-	55	96.319	Microtus_ochrogaster
MGP_CAROLIEiJ_G0021201	-	72	96.894	ENSMODG00000016077	RPS2	55	96.894	Monodelphis_domestica
MGP_CAROLIEiJ_G0021201	-	78	100.000	ENSMUSG00000044533	Rps2	64	100.000	Mus_musculus
MGP_CAROLIEiJ_G0021201	-	72	100.000	MGP_PahariEiJ_G0023518	Rps2	60	100.000	Mus_pahari
MGP_CAROLIEiJ_G0021201	-	72	98.758	ENSMPUG00000015547	RPS2	60	98.758	Mustela_putorius_furo
MGP_CAROLIEiJ_G0021201	-	72	98.758	ENSMLUG00000011660	RPS2	55	98.758	Myotis_lucifugus
MGP_CAROLIEiJ_G0021201	-	72	98.758	ENSMLUG00000026663	-	55	98.758	Myotis_lucifugus
MGP_CAROLIEiJ_G0021201	-	72	88.820	ENSNGAG00000011241	-	55	88.820	Nannospalax_galili
MGP_CAROLIEiJ_G0021201	-	53	89.076	ENSNGAG00000022639	-	61	90.741	Nannospalax_galili
MGP_CAROLIEiJ_G0021201	-	72	94.479	ENSNGAG00000013739	-	55	94.479	Nannospalax_galili
MGP_CAROLIEiJ_G0021201	-	72	93.168	ENSNGAG00000010299	-	56	93.168	Nannospalax_galili
MGP_CAROLIEiJ_G0021201	-	72	77.019	ENSNLEG00000031557	-	68	83.146	Nomascus_leucogenys
MGP_CAROLIEiJ_G0021201	-	72	97.516	ENSNLEG00000026553	-	80	97.516	Nomascus_leucogenys
MGP_CAROLIEiJ_G0021201	-	72	94.410	ENSNLEG00000018526	-	76	94.410	Nomascus_leucogenys
MGP_CAROLIEiJ_G0021201	-	72	89.506	ENSNLEG00000035248	-	81	89.506	Nomascus_leucogenys
MGP_CAROLIEiJ_G0021201	-	72	98.137	ENSNLEG00000008877	-	55	98.137	Nomascus_leucogenys
MGP_CAROLIEiJ_G0021201	-	64	71.831	ENSODEG00000007526	-	60	94.318	Octodon_degus
MGP_CAROLIEiJ_G0021201	-	72	91.925	ENSODEG00000007912	-	57	91.925	Octodon_degus
MGP_CAROLIEiJ_G0021201	-	72	98.137	ENSODEG00000013906	-	55	98.137	Octodon_degus
MGP_CAROLIEiJ_G0021201	-	61	72.059	ENSODEG00000014327	-	70	94.186	Octodon_degus
MGP_CAROLIEiJ_G0021201	-	72	98.137	ENSOGAG00000010098	RPS2	55	98.137	Otolemur_garnettii
MGP_CAROLIEiJ_G0021201	-	70	67.516	ENSOGAG00000027649	-	54	75.000	Otolemur_garnettii
MGP_CAROLIEiJ_G0021201	-	72	91.304	ENSPPAG00000036261	-	54	91.304	Pan_paniscus
MGP_CAROLIEiJ_G0021201	-	66	97.297	ENSPPAG00000028366	-	81	94.375	Pan_paniscus
MGP_CAROLIEiJ_G0021201	-	72	98.137	ENSPPRG00000004155	RPS2	81	98.137	Panthera_pardus
MGP_CAROLIEiJ_G0021201	-	72	93.168	ENSPTRG00000047136	-	83	93.168	Pan_troglodytes
MGP_CAROLIEiJ_G0021201	-	72	97.516	ENSPTRG00000052871	-	82	97.516	Pan_troglodytes
MGP_CAROLIEiJ_G0021201	-	72	96.894	ENSPTRG00000045169	-	55	96.894	Pan_troglodytes
MGP_CAROLIEiJ_G0021201	-	72	95.031	ENSPANG00000006332	-	76	95.031	Papio_anubis
MGP_CAROLIEiJ_G0021201	-	72	86.335	ENSPANG00000021004	-	81	86.335	Papio_anubis
MGP_CAROLIEiJ_G0021201	-	66	96.622	ENSPANG00000001307	-	70	96.894	Papio_anubis
MGP_CAROLIEiJ_G0021201	-	72	71.429	ENSPANG00000029719	-	62	85.393	Papio_anubis
MGP_CAROLIEiJ_G0021201	-	72	100.000	ENSPEMG00000012503	Rps2	55	100.000	Peromyscus_maniculatus_bairdii
MGP_CAROLIEiJ_G0021201	-	72	83.230	ENSPCIG00000028110	-	58	97.222	Phascolarctos_cinereus
MGP_CAROLIEiJ_G0021201	-	72	96.894	ENSPCIG00000021804	-	60	96.894	Phascolarctos_cinereus
MGP_CAROLIEiJ_G0021201	-	72	97.516	ENSPPYG00000017534	-	55	97.516	Pongo_abelii
MGP_CAROLIEiJ_G0021201	-	72	96.894	ENSPPYG00000008843	-	55	96.894	Pongo_abelii
MGP_CAROLIEiJ_G0021201	-	72	97.516	ENSPPYG00000005178	-	55	97.516	Pongo_abelii
MGP_CAROLIEiJ_G0021201	-	72	97.516	ENSPPYG00000029680	-	75	97.516	Pongo_abelii
MGP_CAROLIEiJ_G0021201	-	72	96.894	ENSPPYG00000010615	-	55	96.894	Pongo_abelii
MGP_CAROLIEiJ_G0021201	-	72	96.273	ENSPCAG00000002090	RPS2	55	96.273	Procavia_capensis
MGP_CAROLIEiJ_G0021201	-	72	97.516	ENSPCOG00000028664	RPS2	82	97.516	Propithecus_coquereli
MGP_CAROLIEiJ_G0021201	-	72	98.758	ENSPVAG00000016704	-	55	98.758	Pteropus_vampyrus
MGP_CAROLIEiJ_G0021201	-	72	74.534	ENSRNOG00000033244	AABR07069969.1	51	74.534	Rattus_norvegicus
MGP_CAROLIEiJ_G0021201	-	72	94.410	ENSRNOG00000032289	AABR07067814.1	55	94.410	Rattus_norvegicus
MGP_CAROLIEiJ_G0021201	-	72	83.851	ENSRNOG00000022934	AABR07066818.1	94	82.014	Rattus_norvegicus
MGP_CAROLIEiJ_G0021201	-	72	74.534	ENSRNOG00000020641	AC115384.1	51	74.534	Rattus_norvegicus
MGP_CAROLIEiJ_G0021201	-	72	100.000	ENSRNOG00000014179	Rps2	55	100.000	Rattus_norvegicus
MGP_CAROLIEiJ_G0021201	-	72	97.516	ENSRBIG00000036242	-	82	97.516	Rhinopithecus_bieti
MGP_CAROLIEiJ_G0021201	-	72	96.273	ENSRBIG00000044903	-	73	96.273	Rhinopithecus_bieti
MGP_CAROLIEiJ_G0021201	-	87	77.835	ENSRBIG00000038075	-	82	88.820	Rhinopithecus_bieti
MGP_CAROLIEiJ_G0021201	-	72	89.441	ENSRBIG00000032204	-	58	89.441	Rhinopithecus_bieti
MGP_CAROLIEiJ_G0021201	-	72	97.516	ENSRROG00000035267	RPS2	82	97.516	Rhinopithecus_roxellana
MGP_CAROLIEiJ_G0021201	-	72	93.789	ENSRROG00000037709	-	55	93.789	Rhinopithecus_roxellana
MGP_CAROLIEiJ_G0021201	-	71	96.855	ENSRROG00000041787	-	71	96.855	Rhinopithecus_roxellana
MGP_CAROLIEiJ_G0021201	-	72	96.273	ENSRROG00000043970	-	82	96.273	Rhinopithecus_roxellana
MGP_CAROLIEiJ_G0021201	-	72	89.441	ENSRROG00000030456	-	55	89.441	Rhinopithecus_roxellana
MGP_CAROLIEiJ_G0021201	-	71	88.050	ENSRROG00000034497	-	57	88.050	Rhinopithecus_roxellana
MGP_CAROLIEiJ_G0021201	-	72	96.894	ENSSHAG00000015213	-	55	96.894	Sarcophilus_harrisii
MGP_CAROLIEiJ_G0021201	-	72	98.137	ENSSSCG00000033697	-	55	98.137	Sus_scrofa
MGP_CAROLIEiJ_G0021201	-	72	95.732	ENSTTRG00000011393	RPS2	55	95.732	Tursiops_truncatus
MGP_CAROLIEiJ_G0021201	-	72	98.758	ENSUAMG00000019281	-	56	98.758	Ursus_americanus
MGP_CAROLIEiJ_G0021201	-	53	99.160	ENSVVUG00000021931	-	50	99.160	Vulpes_vulpes
MGP_CAROLIEiJ_G0021201	-	67	98.667	ENSVVUG00000009633	-	51	98.667	Vulpes_vulpes