EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: MGP_CAROLIEiJ_G0021519 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Mus_caroli
Status: putative
Strand: Plus strand
Length: 5738 bases
Position: chr17:31983996-31989733
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CAROLIEiJ_P0044498	DEAD	PF00270.29	4.6e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CAROLIEiJ_T0044499	-	743	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0044498	-	1090	-	MGP_CAROLIEiJ_P0044498	184 (aa)	-	-

Gene Model

Click here to download MGP_CAROLIEiJ_G0021519's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CAROLIEiJ_G0021519's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CAROLIEiJ_G0021519	-	100	86.413	MGP_CAROLIEiJ_G0031277	Ddx39	88	86.413
MGP_CAROLIEiJ_G0021519	-	89	34.356	MGP_CAROLIEiJ_G0028986	Ddx47	61	33.333
MGP_CAROLIEiJ_G0021519	-	72	34.752	MGP_CAROLIEiJ_G0016069	Ddx56	51	31.852

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_CAROLIEiJ_G0021519	-	97	97.765	ENSG00000198563	DDX39B	100	98.400	Homo_sapiens
MGP_CAROLIEiJ_G0021519	-	97	87.151	ENSTSYG00000029741	-	79	87.151	Carlito_syrichta
MGP_CAROLIEiJ_G0021519	-	97	97.765	ENSCANG00000041217	DDX39B	56	97.765	Colobus_angolensis_palliatus
MGP_CAROLIEiJ_G0021519	-	97	97.765	ENSCGRG00001017315	-	83	97.765	Cricetulus_griseus_chok1gshd
MGP_CAROLIEiJ_G0021519	-	97	97.207	ENSCGRG00000000078	-	78	97.207	Cricetulus_griseus_crigri
MGP_CAROLIEiJ_G0021519	-	97	97.765	ENSCGRG00000012479	-	56	97.765	Cricetulus_griseus_crigri
MGP_CAROLIEiJ_G0021519	-	97	97.765	ENSGGOG00000005989	DDX39B	56	97.765	Gorilla_gorilla
MGP_CAROLIEiJ_G0021519	-	100	84.574	ENSHBUG00000022054	-	70	84.574	Haplochromis_burtoni
MGP_CAROLIEiJ_G0021519	-	97	74.860	ENSLBEG00000017177	-	61	74.860	Labrus_bergylta
MGP_CAROLIEiJ_G0021519	-	97	97.765	ENSLAFG00000014202	DDX39B	68	97.765	Loxodonta_africana
MGP_CAROLIEiJ_G0021519	-	97	97.765	ENSMFAG00000034233	DDX39B	56	97.765	Macaca_fascicularis
MGP_CAROLIEiJ_G0021519	-	97	97.765	ENSMMUG00000008839	DDX39B	56	97.765	Macaca_mulatta
MGP_CAROLIEiJ_G0021519	-	97	97.765	ENSMNEG00000041059	DDX39B	56	97.765	Macaca_nemestrina
MGP_CAROLIEiJ_G0021519	-	97	97.765	ENSMLEG00000043791	DDX39B	56	97.765	Mandrillus_leucophaeus
MGP_CAROLIEiJ_G0021519	-	97	98.883	ENSMUSG00000019432	Ddx39b	66	97.938	Mus_musculus
MGP_CAROLIEiJ_G0021519	-	97	98.883	MGP_PahariEiJ_G0020513	Ddx39b	66	97.938	Mus_pahari
MGP_CAROLIEiJ_G0021519	-	97	98.883	MGP_SPRETEiJ_G0022424	Ddx39b	55	98.883	Mus_spretus
MGP_CAROLIEiJ_G0021519	-	97	97.765	ENSOANG00000008361	DDX39B	72	97.765	Ornithorhynchus_anatinus
MGP_CAROLIEiJ_G0021519	-	97	97.765	ENSPANG00000018609	DDX39B	56	97.765	Papio_anubis
MGP_CAROLIEiJ_G0021519	-	97	97.765	ENSRBIG00000031309	DDX39B	56	97.765	Rhinopithecus_bieti
MGP_CAROLIEiJ_G0021519	-	97	97.765	ENSRROG00000039517	DDX39B	56	97.765	Rhinopithecus_roxellana
MGP_CAROLIEiJ_G0021519	-	97	97.765	ENSSBOG00000035513	-	56	97.765	Saimiri_boliviensis_boliviensis
MGP_CAROLIEiJ_G0021519	-	79	96.575	ENSSBOG00000030486	-	97	96.575	Saimiri_boliviensis_boliviensis
MGP_CAROLIEiJ_G0021519	-	100	82.609	ENSUMAG00000015124	DDX39B	84	82.609	Ursus_maritimus