EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: MGP_CAROLIEiJ_G0021529 (Gene tree)
Gene ID: 110312546
Gene Symbol: Vars2
Alias: 1190004I24Rik|Vars2l
Full Name: valyl-tRNA synthetase 2%2C mitochondrial
Gene Type: protein_coding
Species: Mus_caroli
Status: putative
Strand: Minus strand
Length: 11841 bases
Position: chr17:32432526-32444366
Accession: 110312546
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CAROLIEiJ_P0044527	tRNA-synt_1g	PF09334.11	8.5e-15	1	1
MGP_CAROLIEiJ_P0044527	Anticodon_1	PF08264.13	7.9e-31	1	1
MGP_CAROLIEiJ_P0044527	tRNA-synt_1	PF00133.22	3.5e-181	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CAROLIEiJ_T0044529	-	2506	-	MGP_CAROLIEiJ_P0044529	579 (aa)	-	-
MGP_CAROLIEiJ_T0044528	-	3783	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0044538	-	707	-	MGP_CAROLIEiJ_P0044538	75 (aa)	-	UPI0001F78C44
MGP_CAROLIEiJ_T0044537	-	775	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0044536	-	618	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0044534	-	828	-	MGP_CAROLIEiJ_P0044534	112 (aa)	-	-
MGP_CAROLIEiJ_T0044527	-	4394	XM_021186231	MGP_CAROLIEiJ_P0044527	1060 (aa)	XP_021041890	UPI000A316BC4
MGP_CAROLIEiJ_T0044535	-	708	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0044532	-	603	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0044533	-	319	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0044530	-	1972	-	MGP_CAROLIEiJ_P0044530	214 (aa)	-	-
MGP_CAROLIEiJ_T0044531	-	732	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_CAROLIEiJ_G0021529's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CAROLIEiJ_G0021529's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CAROLIEiJ_G0021529	Vars2	93	52.661	MGP_CAROLIEiJ_G0021491	Vars	82	50.336

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_CAROLIEiJ_G0021529	Vars2	88	64.286	ENSAPOG00000007396	vars2	97	51.747	Acanthochromis_polyacanthus
MGP_CAROLIEiJ_G0021529	Vars2	100	82.015	ENSAMEG00000012997	VARS2	97	82.015	Ailuropoda_melanoleuca
MGP_CAROLIEiJ_G0021529	Vars2	97	55.360	ENSACIG00000004344	vars2	99	51.458	Amphilophus_citrinellus
MGP_CAROLIEiJ_G0021529	Vars2	97	54.811	ENSAOCG00000000476	vars2	97	51.036	Amphiprion_ocellaris
MGP_CAROLIEiJ_G0021529	Vars2	97	54.639	ENSAPEG00000008646	vars2	95	51.036	Amphiprion_percula
MGP_CAROLIEiJ_G0021529	Vars2	97	55.692	ENSATEG00000012291	vars2	97	51.919	Anabas_testudineus
MGP_CAROLIEiJ_G0021529	Vars2	97	60.243	ENSACAG00000022093	VARS2	98	57.885	Anolis_carolinensis
MGP_CAROLIEiJ_G0021529	Vars2	99	83.176	ENSANAG00000038018	VARS2	99	83.176	Aotus_nancymaae
MGP_CAROLIEiJ_G0021529	Vars2	97	54.231	ENSACLG00000018673	vars2	99	50.743	Astatotilapia_calliptera
MGP_CAROLIEiJ_G0021529	Vars2	93	58.123	ENSAMXG00000017773	vars2	98	51.948	Astyanax_mexicanus
MGP_CAROLIEiJ_G0021529	Vars2	99	84.739	ENSBTAG00000010698	VARS2	99	84.688	Bos_taurus
MGP_CAROLIEiJ_G0021529	Vars2	100	83.145	ENSCJAG00000019826	VARS2	99	83.145	Callithrix_jacchus
MGP_CAROLIEiJ_G0021529	Vars2	100	81.168	ENSCAFG00000000454	VARS2	100	81.168	Canis_familiaris
MGP_CAROLIEiJ_G0021529	Vars2	94	84.530	ENSCAFG00020019387	VARS2	95	83.208	Canis_lupus_dingo
MGP_CAROLIEiJ_G0021529	Vars2	99	84.630	ENSCHIG00000007847	VARS2	99	84.499	Capra_hircus
MGP_CAROLIEiJ_G0021529	Vars2	99	83.475	ENSTSYG00000009904	VARS2	99	83.475	Carlito_syrichta
MGP_CAROLIEiJ_G0021529	Vars2	91	86.275	ENSCAPG00000017770	VARS2	99	82.347	Cavia_aperea
MGP_CAROLIEiJ_G0021529	Vars2	99	81.887	ENSCPOG00000021834	VARS2	99	81.887	Cavia_porcellus
MGP_CAROLIEiJ_G0021529	Vars2	99	83.962	ENSCCAG00000037907	VARS2	99	83.962	Cebus_capucinus
MGP_CAROLIEiJ_G0021529	Vars2	99	84.216	ENSCATG00000032554	VARS2	99	84.216	Cercocebus_atys
MGP_CAROLIEiJ_G0021529	Vars2	99	81.356	ENSCLAG00000002889	VARS2	99	81.356	Chinchilla_lanigera
MGP_CAROLIEiJ_G0021529	Vars2	99	84.026	ENSCSAG00000008327	VARS2	99	84.026	Chlorocebus_sabaeus
MGP_CAROLIEiJ_G0021529	Vars2	97	62.367	ENSCPBG00000021502	VARS2	96	62.101	Chrysemys_picta_bellii
MGP_CAROLIEiJ_G0021529	Vars2	99	84.121	ENSCANG00000014991	VARS2	99	84.121	Colobus_angolensis_palliatus
MGP_CAROLIEiJ_G0021529	Vars2	99	90.353	ENSCGRG00001021535	Vars2	100	90.189	Cricetulus_griseus_chok1gshd
MGP_CAROLIEiJ_G0021529	Vars2	99	90.353	ENSCGRG00000014112	Vars2	100	90.189	Cricetulus_griseus_crigri
MGP_CAROLIEiJ_G0021529	Vars2	99	45.576	ENSCSEG00000015432	vars2	89	57.447	Cynoglossus_semilaevis
MGP_CAROLIEiJ_G0021529	Vars2	94	56.498	ENSCVAG00000017765	vars2	94	53.756	Cyprinodon_variegatus
MGP_CAROLIEiJ_G0021529	Vars2	88	66.327	ENSDARG00000056717	vars2	97	52.207	Danio_rerio
MGP_CAROLIEiJ_G0021529	Vars2	93	86.581	ENSDORG00000008516	Vars2	93	84.542	Dipodomys_ordii
MGP_CAROLIEiJ_G0021529	Vars2	99	72.633	ENSETEG00000014844	VARS2	99	72.633	Echinops_telfairi
MGP_CAROLIEiJ_G0021529	Vars2	84	59.574	ENSEBUG00000010396	-	94	57.227	Eptatretus_burgeri
MGP_CAROLIEiJ_G0021529	Vars2	99	84.166	ENSEASG00005019997	VARS2	97	84.166	Equus_asinus_asinus
MGP_CAROLIEiJ_G0021529	Vars2	99	85.391	ENSECAG00000018202	VARS2	99	85.391	Equus_caballus
MGP_CAROLIEiJ_G0021529	Vars2	69	78.894	ENSEEUG00000012591	-	63	80.583	Erinaceus_europaeus
MGP_CAROLIEiJ_G0021529	Vars2	93	55.654	ENSELUG00000017824	vars2	98	51.437	Esox_lucius
MGP_CAROLIEiJ_G0021529	Vars2	100	83.145	ENSFCAG00000010531	VARS2	100	83.145	Felis_catus
MGP_CAROLIEiJ_G0021529	Vars2	99	82.298	ENSFDAG00000017216	VARS2	99	82.298	Fukomys_damarensis
MGP_CAROLIEiJ_G0021529	Vars2	97	50.355	ENSFHEG00000013932	vars2	93	51.148	Fundulus_heteroclitus
MGP_CAROLIEiJ_G0021529	Vars2	97	55.830	ENSGMOG00000018960	vars2	99	55.941	Gadus_morhua
MGP_CAROLIEiJ_G0021529	Vars2	97	54.404	ENSGAFG00000004737	vars2	89	51.069	Gambusia_affinis
MGP_CAROLIEiJ_G0021529	Vars2	97	56.560	ENSGACG00000001464	vars2	99	54.112	Gasterosteus_aculeatus
MGP_CAROLIEiJ_G0021529	Vars2	97	63.428	ENSGAGG00000011652	VARS2	99	60.993	Gopherus_agassizii
MGP_CAROLIEiJ_G0021529	Vars2	99	83.932	ENSGGOG00000014587	VARS2	99	83.932	Gorilla_gorilla
MGP_CAROLIEiJ_G0021529	Vars2	97	53.460	ENSHBUG00000002448	vars2	100	48.833	Haplochromis_burtoni
MGP_CAROLIEiJ_G0021529	Vars2	99	81.262	ENSHGLG00000012886	VARS2	96	81.262	Heterocephalus_glaber_female
MGP_CAROLIEiJ_G0021529	Vars2	99	81.073	ENSHGLG00100016535	VARS2	99	81.073	Heterocephalus_glaber_male
MGP_CAROLIEiJ_G0021529	Vars2	97	55.575	ENSHCOG00000017907	vars2	94	52.750	Hippocampus_comes
MGP_CAROLIEiJ_G0021529	Vars2	93	58.759	ENSIPUG00000015573	Vars2	98	52.820	Ictalurus_punctatus
MGP_CAROLIEiJ_G0021529	Vars2	99	85.849	ENSSTOG00000009924	VARS2	99	85.849	Ictidomys_tridecemlineatus
MGP_CAROLIEiJ_G0021529	Vars2	99	82.908	ENSJJAG00000011144	Vars2	99	82.908	Jaculus_jaculus
MGP_CAROLIEiJ_G0021529	Vars2	97	54.110	ENSKMAG00000001393	vars2	98	51.169	Kryptolebias_marmoratus
MGP_CAROLIEiJ_G0021529	Vars2	83	65.591	ENSLBEG00000005480	-	81	62.681	Labrus_bergylta
MGP_CAROLIEiJ_G0021529	Vars2	93	56.318	ENSLBEG00000011949	vars2	97	50.707	Labrus_bergylta
MGP_CAROLIEiJ_G0021529	Vars2	97	59.683	ENSLACG00000001576	-	99	52.473	Latimeria_chalumnae
MGP_CAROLIEiJ_G0021529	Vars2	99	82.670	ENSLAFG00000015183	VARS2	99	82.670	Loxodonta_africana
MGP_CAROLIEiJ_G0021529	Vars2	99	83.932	ENSMFAG00000042367	VARS2	99	83.932	Macaca_fascicularis
MGP_CAROLIEiJ_G0021529	Vars2	99	84.026	ENSMMUG00000018609	VARS2	99	84.026	Macaca_mulatta
MGP_CAROLIEiJ_G0021529	Vars2	99	84.026	ENSMNEG00000043163	VARS2	99	84.026	Macaca_nemestrina
MGP_CAROLIEiJ_G0021529	Vars2	99	84.310	ENSMLEG00000041728	VARS2	97	84.310	Mandrillus_leucophaeus
MGP_CAROLIEiJ_G0021529	Vars2	97	53.541	ENSMAMG00000020339	vars2	96	51.100	Mastacembelus_armatus
MGP_CAROLIEiJ_G0021529	Vars2	97	54.059	ENSMZEG00005017669	vars2	99	50.651	Maylandia_zebra
MGP_CAROLIEiJ_G0021529	Vars2	64	60.270	ENSMGAG00000008005	-	100	57.177	Meleagris_gallopavo
MGP_CAROLIEiJ_G0021529	Vars2	100	89.727	ENSMAUG00000018946	Vars2	100	89.727	Mesocricetus_auratus
MGP_CAROLIEiJ_G0021529	Vars2	93	86.322	ENSMICG00000005365	VARS2	100	86.771	Microcebus_murinus
MGP_CAROLIEiJ_G0021529	Vars2	94	92.848	ENSMOCG00000014607	Vars2	100	92.848	Microtus_ochrogaster
MGP_CAROLIEiJ_G0021529	Vars2	97	56.567	ENSMMOG00000012122	vars2	98	51.890	Mola_mola
MGP_CAROLIEiJ_G0021529	Vars2	99	73.987	ENSMODG00000015848	VARS2	99	73.987	Monodelphis_domestica
MGP_CAROLIEiJ_G0021529	Vars2	97	56.217	ENSMALG00000009217	vars2	95	54.933	Monopterus_albus
MGP_CAROLIEiJ_G0021529	Vars2	100	98.214	ENSMUSG00000038838	Vars2	100	98.214	Mus_musculus
MGP_CAROLIEiJ_G0021529	Vars2	100	98.214	MGP_PahariEiJ_G0020523	Vars2	100	98.214	Mus_pahari
MGP_CAROLIEiJ_G0021529	Vars2	100	100.000	MGP_SPRETEiJ_G0022436	Vars2	100	100.000	Mus_spretus
MGP_CAROLIEiJ_G0021529	Vars2	100	82.298	ENSMPUG00000011643	VARS2	100	82.298	Mustela_putorius_furo
MGP_CAROLIEiJ_G0021529	Vars2	99	81.139	ENSMLUG00000002356	VARS2	97	81.139	Myotis_lucifugus
MGP_CAROLIEiJ_G0021529	Vars2	90	94.059	ENSNGAG00000020607	Vars2	100	79.135	Nannospalax_galili
MGP_CAROLIEiJ_G0021529	Vars2	60	48.209	ENSNBRG00000001624	vars2	57	48.760	Neolamprologus_brichardi
MGP_CAROLIEiJ_G0021529	Vars2	99	80.587	ENSNLEG00000005625	VARS2	97	80.587	Nomascus_leucogenys
MGP_CAROLIEiJ_G0021529	Vars2	77	75.362	ENSMEUG00000014475	VARS2	89	73.456	Notamacropus_eugenii
MGP_CAROLIEiJ_G0021529	Vars2	85	87.368	ENSOPRG00000000682	VARS2	90	81.416	Ochotona_princeps
MGP_CAROLIEiJ_G0021529	Vars2	99	80.791	ENSODEG00000017965	VARS2	99	80.791	Octodon_degus
MGP_CAROLIEiJ_G0021529	Vars2	65	58.924	ENSONIG00000004734	vars2	72	58.924	Oreochromis_niloticus
MGP_CAROLIEiJ_G0021529	Vars2	93	74.242	ENSOANG00000000398	-	98	85.294	Ornithorhynchus_anatinus
MGP_CAROLIEiJ_G0021529	Vars2	93	83.920	ENSOCUG00000021496	VARS2	64	77.985	Oryctolagus_cuniculus
MGP_CAROLIEiJ_G0021529	Vars2	97	54.922	ENSORLG00000010632	vars2	94	52.047	Oryzias_latipes
MGP_CAROLIEiJ_G0021529	Vars2	97	54.922	ENSORLG00020018584	vars2	96	51.338	Oryzias_latipes_hni
MGP_CAROLIEiJ_G0021529	Vars2	97	54.750	ENSORLG00015010408	vars2	96	51.192	Oryzias_latipes_hsok
MGP_CAROLIEiJ_G0021529	Vars2	97	55.268	ENSOMEG00000008360	vars2	93	52.947	Oryzias_melastigma
MGP_CAROLIEiJ_G0021529	Vars2	99	84.057	ENSOGAG00000006087	VARS2	97	84.057	Otolemur_garnettii
MGP_CAROLIEiJ_G0021529	Vars2	99	83.602	ENSOARG00000010844	VARS2	98	83.475	Ovis_aries
MGP_CAROLIEiJ_G0021529	Vars2	99	83.932	ENSPPAG00000041141	VARS2	99	83.932	Pan_paniscus
MGP_CAROLIEiJ_G0021529	Vars2	100	82.486	ENSPPRG00000006751	VARS2	97	82.486	Panthera_pardus
MGP_CAROLIEiJ_G0021529	Vars2	100	82.392	ENSPTIG00000017799	VARS2	98	83.602	Panthera_tigris_altaica
MGP_CAROLIEiJ_G0021529	Vars2	99	83.932	ENSPTRG00000034497	VARS2	99	83.932	Pan_troglodytes
MGP_CAROLIEiJ_G0021529	Vars2	99	84.216	ENSPANG00000018481	VARS2	100	84.511	Papio_anubis
MGP_CAROLIEiJ_G0021529	Vars2	98	57.465	ENSPKIG00000011372	vars2	98	53.730	Paramormyrops_kingsleyae
MGP_CAROLIEiJ_G0021529	Vars2	93	60.870	ENSPSIG00000006206	VARS2	92	65.899	Pelodiscus_sinensis
MGP_CAROLIEiJ_G0021529	Vars2	88	65.306	ENSPMGG00000000465	vars2	98	52.493	Periophthalmus_magnuspinnatus
MGP_CAROLIEiJ_G0021529	Vars2	100	92.358	ENSPEMG00000014691	Vars2	100	92.358	Peromyscus_maniculatus_bairdii
MGP_CAROLIEiJ_G0021529	Vars2	99	75.520	ENSPCIG00000015040	VARS2	99	75.520	Phascolarctos_cinereus
MGP_CAROLIEiJ_G0021529	Vars2	97	55.226	ENSPFOG00000017616	vars2	95	51.694	Poecilia_formosa
MGP_CAROLIEiJ_G0021529	Vars2	97	54.419	ENSPLAG00000019778	vars2	99	49.954	Poecilia_latipinna
MGP_CAROLIEiJ_G0021529	Vars2	97	54.593	ENSPMEG00000011123	vars2	98	50.852	Poecilia_mexicana
MGP_CAROLIEiJ_G0021529	Vars2	96	54.386	ENSPREG00000014998	vars2	96	46.881	Poecilia_reticulata
MGP_CAROLIEiJ_G0021529	Vars2	99	84.042	ENSPPYG00000016424	VARS2	99	84.042	Pongo_abelii
MGP_CAROLIEiJ_G0021529	Vars2	93	71.859	ENSPCAG00000006946	VARS2	84	77.462	Procavia_capensis
MGP_CAROLIEiJ_G0021529	Vars2	99	83.505	ENSPCOG00000014839	VARS2	97	83.505	Propithecus_coquereli
MGP_CAROLIEiJ_G0021529	Vars2	99	82.231	ENSPVAG00000004197	VARS2	99	82.231	Pteropus_vampyrus
MGP_CAROLIEiJ_G0021529	Vars2	82	59.140	ENSPNYG00000010314	vars2	100	59.140	Pundamilia_nyererei
MGP_CAROLIEiJ_G0021529	Vars2	93	58.409	ENSPNAG00000026793	vars2	96	53.817	Pygocentrus_nattereri
MGP_CAROLIEiJ_G0021529	Vars2	100	94.623	ENSRNOG00000000833	Vars2	100	94.623	Rattus_norvegicus
MGP_CAROLIEiJ_G0021529	Vars2	99	83.932	ENSRBIG00000032725	VARS2	99	83.932	Rhinopithecus_bieti
MGP_CAROLIEiJ_G0021529	Vars2	99	83.932	ENSRROG00000043847	VARS2	99	83.932	Rhinopithecus_roxellana
MGP_CAROLIEiJ_G0021529	Vars2	99	81.423	ENSSBOG00000033240	VARS2	97	81.423	Saimiri_boliviensis_boliviensis
MGP_CAROLIEiJ_G0021529	Vars2	99	74.669	ENSSHAG00000009307	VARS2	100	74.669	Sarcophilus_harrisii
MGP_CAROLIEiJ_G0021529	Vars2	94	58.484	ENSSFOG00015016187	vars2	98	52.425	Scleropages_formosus
MGP_CAROLIEiJ_G0021529	Vars2	96	56.328	ENSSMAG00000020842	vars2	97	52.431	Scophthalmus_maximus
MGP_CAROLIEiJ_G0021529	Vars2	97	55.709	ENSSDUG00000011598	vars2	97	52.232	Seriola_dumerili
MGP_CAROLIEiJ_G0021529	Vars2	97	56.106	ENSSLDG00000015492	vars2	97	51.530	Seriola_lalandi_dorsalis
MGP_CAROLIEiJ_G0021529	Vars2	57	85.401	ENSSARG00000003786	-	69	85.401	Sorex_araneus
MGP_CAROLIEiJ_G0021529	Vars2	97	60.354	ENSSPUG00000014700	VARS2	94	59.062	Sphenodon_punctatus
MGP_CAROLIEiJ_G0021529	Vars2	97	52.993	ENSSPAG00000004654	vars2	98	49.763	Stegastes_partitus
MGP_CAROLIEiJ_G0021529	Vars2	100	84.087	ENSSSCG00000001384	VARS2	100	84.087	Sus_scrofa
MGP_CAROLIEiJ_G0021529	Vars2	94	58.258	ENSTRUG00000005264	vars2	96	52.524	Takifugu_rubripes
MGP_CAROLIEiJ_G0021529	Vars2	93	57.326	ENSTNIG00000005916	vars2	95	52.473	Tetraodon_nigroviridis
MGP_CAROLIEiJ_G0021529	Vars2	52	88.060	ENSTBEG00000007976	-	52	88.060	Tupaia_belangeri
MGP_CAROLIEiJ_G0021529	Vars2	93	84.685	ENSTTRG00000012243	VARS2	99	72.306	Tursiops_truncatus
MGP_CAROLIEiJ_G0021529	Vars2	100	82.220	ENSUAMG00000026124	VARS2	100	83.839	Ursus_americanus
MGP_CAROLIEiJ_G0021529	Vars2	100	82.768	ENSUMAG00000019894	VARS2	100	82.768	Ursus_maritimus
MGP_CAROLIEiJ_G0021529	Vars2	70	84.615	ENSVPAG00000003703	-	64	92.857	Vicugna_pacos
MGP_CAROLIEiJ_G0021529	Vars2	100	81.638	ENSVVUG00000010754	VARS2	95	81.638	Vulpes_vulpes
MGP_CAROLIEiJ_G0021529	Vars2	89	63.000	ENSXETG00000003036	vars2	99	54.774	Xenopus_tropicalis
MGP_CAROLIEiJ_G0021529	Vars2	97	55.810	ENSXCOG00000003455	vars2	96	52.877	Xiphophorus_couchianus
MGP_CAROLIEiJ_G0021529	Vars2	97	54.577	ENSXMAG00000013523	vars2	97	51.567	Xiphophorus_maculatus