EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_CAROLIEiJ_G0021541 (Gene tree)
Gene ID: 110284359
Gene Symbol: Mrps18b
Alias: 2400002C15Rik
Full Name: mitochondrial ribosomal protein S18B
Gene Type: protein_coding
Species: Mus_caroli
Status: putative
Strand: Minus strand
Length: 6310 bases
Position: chr17:32686071-32692380
Accession: 110284359
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CAROLIEiJ_P0044624	Ribosomal_S18	PF01084.20	5.4e-16	1	1
MGP_CAROLIEiJ_P0044625	Ribosomal_S18	PF01084.20	8.5e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CAROLIEiJ_T0044631	-	418	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0044630	-	905	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0044626	-	846	-	MGP_CAROLIEiJ_P0044626	188 (aa)	-	-
MGP_CAROLIEiJ_T0044627	-	742	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0044624	-	1077	XM_021150093	MGP_CAROLIEiJ_P0044624	254 (aa)	XP_021005752	UPI000A31A4D1
MGP_CAROLIEiJ_T0044625	-	801	-	MGP_CAROLIEiJ_P0044625	162 (aa)	-	-
MGP_CAROLIEiJ_T0044628	-	488	-	MGP_CAROLIEiJ_P0044628	110 (aa)	-	-
MGP_CAROLIEiJ_T0044629	-	346	-	MGP_CAROLIEiJ_P0044629	105 (aa)	-	-

Gene Model

Click here to download MGP_CAROLIEiJ_G0021541's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CAROLIEiJ_G0021541's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_CAROLIEiJ_G0021541	Mrps18b	100	78.599	ENSG00000204568	MRPS18B	99	78.599	Homo_sapiens
MGP_CAROLIEiJ_G0021541	Mrps18b	78	47.236	ENSAPOG00000003719	mrps18b	81	47.236	Acanthochromis_polyacanthus
MGP_CAROLIEiJ_G0021541	Mrps18b	100	79.377	ENSAMEG00000013279	MRPS18B	99	79.377	Ailuropoda_melanoleuca
MGP_CAROLIEiJ_G0021541	Mrps18b	87	44.082	ENSACIG00000013156	mrps18b	99	44.082	Amphilophus_citrinellus
MGP_CAROLIEiJ_G0021541	Mrps18b	69	52.299	ENSAOCG00000008569	mrps18b	71	52.299	Amphiprion_ocellaris
MGP_CAROLIEiJ_G0021541	Mrps18b	69	52.299	ENSAPEG00000008204	mrps18b	71	52.299	Amphiprion_percula
MGP_CAROLIEiJ_G0021541	Mrps18b	73	48.925	ENSATEG00000012949	mrps18b	74	49.180	Anabas_testudineus
MGP_CAROLIEiJ_G0021541	Mrps18b	81	56.338	ENSACAG00000010755	MRPS18B	99	55.924	Anolis_carolinensis
MGP_CAROLIEiJ_G0021541	Mrps18b	94	80.753	ENSANAG00000021210	MRPS18B	99	78.210	Aotus_nancymaae
MGP_CAROLIEiJ_G0021541	Mrps18b	85	47.685	ENSACLG00000015409	mrps18b	85	47.685	Astatotilapia_calliptera
MGP_CAROLIEiJ_G0021541	Mrps18b	59	45.455	ENSACLG00000004576	-	73	45.455	Astatotilapia_calliptera
MGP_CAROLIEiJ_G0021541	Mrps18b	70	51.977	ENSAMXG00000034123	mrps18b	72	51.977	Astyanax_mexicanus
MGP_CAROLIEiJ_G0021541	Mrps18b	100	78.988	ENSBTAG00000006936	MRPS18B	99	78.988	Bos_taurus
MGP_CAROLIEiJ_G0021541	Mrps18b	100	76.265	ENSCJAG00000019949	MRPS18B	99	76.265	Callithrix_jacchus
MGP_CAROLIEiJ_G0021541	Mrps18b	100	78.516	ENSCAFG00000000411	MRPS18B	99	78.516	Canis_familiaris
MGP_CAROLIEiJ_G0021541	Mrps18b	100	78.516	ENSCAFG00020017573	MRPS18B	99	78.516	Canis_lupus_dingo
MGP_CAROLIEiJ_G0021541	Mrps18b	100	78.988	ENSCHIG00000021770	MRPS18B	99	78.988	Capra_hircus
MGP_CAROLIEiJ_G0021541	Mrps18b	98	79.365	ENSTSYG00000003333	MRPS18B	99	79.365	Carlito_syrichta
MGP_CAROLIEiJ_G0021541	Mrps18b	96	77.733	ENSCAPG00000000098	MRPS18B	90	79.913	Cavia_aperea
MGP_CAROLIEiJ_G0021541	Mrps18b	96	77.733	ENSCPOG00000015405	MRPS18B	88	79.913	Cavia_porcellus
MGP_CAROLIEiJ_G0021541	Mrps18b	100	78.210	ENSCCAG00000037423	MRPS18B	99	78.210	Cebus_capucinus
MGP_CAROLIEiJ_G0021541	Mrps18b	100	77.821	ENSCATG00000040250	MRPS18B	99	77.821	Cercocebus_atys
MGP_CAROLIEiJ_G0021541	Mrps18b	96	80.567	ENSCLAG00000003282	MRPS18B	98	80.567	Chinchilla_lanigera
MGP_CAROLIEiJ_G0021541	Mrps18b	100	77.821	ENSCSAG00000018793	-	99	77.821	Chlorocebus_sabaeus
MGP_CAROLIEiJ_G0021541	Mrps18b	100	75.000	ENSCHOG00000005581	MRPS18B	99	75.000	Choloepus_hoffmanni
MGP_CAROLIEiJ_G0021541	Mrps18b	72	63.736	ENSCPBG00000018833	MRPS18B	73	63.536	Chrysemys_picta_bellii
MGP_CAROLIEiJ_G0021541	Mrps18b	100	77.821	ENSCANG00000043568	MRPS18B	99	77.821	Colobus_angolensis_palliatus
MGP_CAROLIEiJ_G0021541	Mrps18b	100	87.451	ENSCGRG00001018086	Mrps18b	100	86.275	Cricetulus_griseus_chok1gshd
MGP_CAROLIEiJ_G0021541	Mrps18b	100	87.451	ENSCGRG00000013676	Mrps18b	100	86.275	Cricetulus_griseus_crigri
MGP_CAROLIEiJ_G0021541	Mrps18b	78	46.465	ENSCSEG00000018717	mrps18b	81	46.465	Cynoglossus_semilaevis
MGP_CAROLIEiJ_G0021541	Mrps18b	72	51.087	ENSCVAG00000004836	mrps18b	73	51.087	Cyprinodon_variegatus
MGP_CAROLIEiJ_G0021541	Mrps18b	85	46.544	ENSDARG00000007065	mrps18b	91	46.364	Danio_rerio
MGP_CAROLIEiJ_G0021541	Mrps18b	93	75.949	ENSDNOG00000032393	MRPS18B	86	75.983	Dasypus_novemcinctus
MGP_CAROLIEiJ_G0021541	Mrps18b	59	44.231	FBgn0032849	mRpS18B	75	44.231	Drosophila_melanogaster
MGP_CAROLIEiJ_G0021541	Mrps18b	100	66.926	ENSETEG00000003113	MRPS18B	99	65.625	Echinops_telfairi
MGP_CAROLIEiJ_G0021541	Mrps18b	83	42.922	ENSEBUG00000003724	mrps18b	81	42.922	Eptatretus_burgeri
MGP_CAROLIEiJ_G0021541	Mrps18b	100	79.767	ENSEASG00005018922	MRPS18B	99	79.767	Equus_asinus_asinus
MGP_CAROLIEiJ_G0021541	Mrps18b	100	78.988	ENSECAG00000022485	MRPS18B	99	78.988	Equus_caballus
MGP_CAROLIEiJ_G0021541	Mrps18b	96	75.203	ENSEEUG00000010352	MRPS18B	99	74.319	Erinaceus_europaeus
MGP_CAROLIEiJ_G0021541	Mrps18b	76	48.969	ENSELUG00000023727	mrps18b	78	48.969	Esox_lucius
MGP_CAROLIEiJ_G0021541	Mrps18b	94	80.335	ENSFCAG00000007686	MRPS18B	99	77.432	Felis_catus
MGP_CAROLIEiJ_G0021541	Mrps18b	94	78.099	ENSFDAG00000012231	MRPS18B	94	79.039	Fukomys_damarensis
MGP_CAROLIEiJ_G0021541	Mrps18b	69	52.874	ENSFHEG00000017861	mrps18b	70	52.874	Fundulus_heteroclitus
MGP_CAROLIEiJ_G0021541	Mrps18b	76	51.295	ENSGMOG00000013271	mrps18b	100	51.295	Gadus_morhua
MGP_CAROLIEiJ_G0021541	Mrps18b	87	46.025	ENSGACG00000001379	mrps18b	98	46.444	Gasterosteus_aculeatus
MGP_CAROLIEiJ_G0021541	Mrps18b	85	42.361	ENSGAGG00000022741	-	65	43.077	Gopherus_agassizii
MGP_CAROLIEiJ_G0021541	Mrps18b	100	70.817	ENSGGOG00000011317	MRPS18B	99	70.817	Gorilla_gorilla
MGP_CAROLIEiJ_G0021541	Mrps18b	85	47.685	ENSHBUG00000008445	mrps18b	85	47.685	Haplochromis_burtoni
MGP_CAROLIEiJ_G0021541	Mrps18b	98	77.600	ENSHGLG00000019371	MRPS18B	99	77.600	Heterocephalus_glaber_female
MGP_CAROLIEiJ_G0021541	Mrps18b	98	77.600	ENSHGLG00100010530	MRPS18B	96	77.600	Heterocephalus_glaber_male
MGP_CAROLIEiJ_G0021541	Mrps18b	78	52.000	ENSHCOG00000007012	mrps18b	81	52.000	Hippocampus_comes
MGP_CAROLIEiJ_G0021541	Mrps18b	83	49.765	ENSIPUG00000013958	mrps18b	70	56.725	Ictalurus_punctatus
MGP_CAROLIEiJ_G0021541	Mrps18b	90	82.609	ENSSTOG00000011853	MRPS18B	99	82.609	Ictidomys_tridecemlineatus
MGP_CAROLIEiJ_G0021541	Mrps18b	100	81.569	ENSJJAG00000003794	Mrps18b	99	81.569	Jaculus_jaculus
MGP_CAROLIEiJ_G0021541	Mrps18b	77	48.223	ENSKMAG00000003449	mrps18b	74	48.731	Kryptolebias_marmoratus
MGP_CAROLIEiJ_G0021541	Mrps18b	73	45.503	ENSLBEG00000012943	mrps18b	77	45.503	Labrus_bergylta
MGP_CAROLIEiJ_G0021541	Mrps18b	82	57.692	ENSLACG00000004722	MRPS18B	83	57.843	Latimeria_chalumnae
MGP_CAROLIEiJ_G0021541	Mrps18b	100	77.132	ENSLAFG00000017285	MRPS18B	100	77.132	Loxodonta_africana
MGP_CAROLIEiJ_G0021541	Mrps18b	100	77.821	ENSMFAG00000003966	MRPS18B	99	77.821	Macaca_fascicularis
MGP_CAROLIEiJ_G0021541	Mrps18b	100	77.821	ENSMMUG00000006525	MRPS18B	99	77.821	Macaca_mulatta
MGP_CAROLIEiJ_G0021541	Mrps18b	100	77.432	ENSMNEG00000045059	MRPS18B	99	77.432	Macaca_nemestrina
MGP_CAROLIEiJ_G0021541	Mrps18b	100	72.374	ENSMLEG00000033833	MRPS18B	99	72.374	Mandrillus_leucophaeus
MGP_CAROLIEiJ_G0021541	Mrps18b	78	49.246	ENSMAMG00000020243	mrps18b	83	49.246	Mastacembelus_armatus
MGP_CAROLIEiJ_G0021541	Mrps18b	56	46.853	ENSMZEG00005019697	-	67	46.853	Maylandia_zebra
MGP_CAROLIEiJ_G0021541	Mrps18b	85	47.685	ENSMZEG00005017910	mrps18b	85	47.685	Maylandia_zebra
MGP_CAROLIEiJ_G0021541	Mrps18b	100	88.272	ENSMAUG00000019160	Mrps18b	100	88.272	Mesocricetus_auratus
MGP_CAROLIEiJ_G0021541	Mrps18b	100	79.297	ENSMICG00000031536	MRPS18B	99	79.297	Microcebus_murinus
MGP_CAROLIEiJ_G0021541	Mrps18b	91	90.476	ENSMOCG00000013273	Mrps18b	100	88.446	Microtus_ochrogaster
MGP_CAROLIEiJ_G0021541	Mrps18b	77	49.231	ENSMMOG00000012076	mrps18b	82	49.231	Mola_mola
MGP_CAROLIEiJ_G0021541	Mrps18b	83	75.829	ENSMODG00000015933	MRPS18B	95	70.306	Monodelphis_domestica
MGP_CAROLIEiJ_G0021541	Mrps18b	83	48.113	ENSMALG00000019456	mrps18b	82	48.113	Monopterus_albus
MGP_CAROLIEiJ_G0021541	Mrps18b	100	100.000	ENSMUSG00000024436	Mrps18b	100	100.000	Mus_musculus
MGP_CAROLIEiJ_G0021541	Mrps18b	100	96.850	MGP_PahariEiJ_G0020535	Mrps18b	100	96.850	Mus_pahari
MGP_CAROLIEiJ_G0021541	Mrps18b	100	100.000	MGP_SPRETEiJ_G0022448	Mrps18b	100	100.000	Mus_spretus
MGP_CAROLIEiJ_G0021541	Mrps18b	100	78.599	ENSMPUG00000011739	MRPS18B	99	78.599	Mustela_putorius_furo
MGP_CAROLIEiJ_G0021541	Mrps18b	99	80.000	ENSMLUG00000008850	MRPS18B	99	80.000	Myotis_lucifugus
MGP_CAROLIEiJ_G0021541	Mrps18b	94	85.833	ENSNGAG00000017874	Mrps18b	99	85.833	Nannospalax_galili
MGP_CAROLIEiJ_G0021541	Mrps18b	64	41.975	ENSNBRG00000020716	-	88	41.975	Neolamprologus_brichardi
MGP_CAROLIEiJ_G0021541	Mrps18b	100	78.599	ENSNLEG00000005224	MRPS18B	99	78.599	Nomascus_leucogenys
MGP_CAROLIEiJ_G0021541	Mrps18b	83	75.355	ENSMEUG00000012457	MRPS18B	95	72.052	Notamacropus_eugenii
MGP_CAROLIEiJ_G0021541	Mrps18b	80	87.692	ENSODEG00000017923	-	89	86.364	Octodon_degus
MGP_CAROLIEiJ_G0021541	Mrps18b	80	50.490	ENSONIG00000015945	mrps18b	85	48.611	Oreochromis_niloticus
MGP_CAROLIEiJ_G0021541	Mrps18b	88	81.416	ENSOCUG00000002149	MRPS18B	99	78.210	Oryctolagus_cuniculus
MGP_CAROLIEiJ_G0021541	Mrps18b	78	51.256	ENSORLG00000010546	mrps18b	78	54.598	Oryzias_latipes
MGP_CAROLIEiJ_G0021541	Mrps18b	78	51.759	ENSORLG00020018506	mrps18b	84	51.759	Oryzias_latipes_hni
MGP_CAROLIEiJ_G0021541	Mrps18b	69	55.172	ENSORLG00015010248	mrps18b	73	55.172	Oryzias_latipes_hsok
MGP_CAROLIEiJ_G0021541	Mrps18b	69	54.598	ENSOMEG00000008194	mrps18b	74	54.598	Oryzias_melastigma
MGP_CAROLIEiJ_G0021541	Mrps18b	100	77.043	ENSOGAG00000004435	MRPS18B	100	77.043	Otolemur_garnettii
MGP_CAROLIEiJ_G0021541	Mrps18b	100	78.988	ENSOARG00000012647	MRPS18B	99	78.988	Ovis_aries
MGP_CAROLIEiJ_G0021541	Mrps18b	100	77.821	ENSPPAG00000018246	-	99	77.821	Pan_paniscus
MGP_CAROLIEiJ_G0021541	Mrps18b	100	78.988	ENSPPAG00000039692	-	99	78.988	Pan_paniscus
MGP_CAROLIEiJ_G0021541	Mrps18b	94	79.916	ENSPPRG00000003538	MRPS18B	99	77.043	Panthera_pardus
MGP_CAROLIEiJ_G0021541	Mrps18b	94	79.916	ENSPTIG00000016443	MRPS18B	99	77.043	Panthera_tigris_altaica
MGP_CAROLIEiJ_G0021541	Mrps18b	100	78.988	ENSPTRG00000017932	MRPS18B	99	78.988	Pan_troglodytes
MGP_CAROLIEiJ_G0021541	Mrps18b	100	77.043	ENSPANG00000017647	MRPS18B	99	77.043	Papio_anubis
MGP_CAROLIEiJ_G0021541	Mrps18b	77	48.980	ENSPKIG00000011007	mrps18b	79	48.980	Paramormyrops_kingsleyae
MGP_CAROLIEiJ_G0021541	Mrps18b	72	61.538	ENSPSIG00000011533	MRPS18B	94	52.889	Pelodiscus_sinensis
MGP_CAROLIEiJ_G0021541	Mrps18b	87	44.856	ENSPMGG00000020546	mrps18b	99	44.856	Periophthalmus_magnuspinnatus
MGP_CAROLIEiJ_G0021541	Mrps18b	100	90.157	ENSPEMG00000001695	Mrps18b	99	92.704	Peromyscus_maniculatus_bairdii
MGP_CAROLIEiJ_G0021541	Mrps18b	85	49.776	ENSPMAG00000001665	mrps18b	93	50.226	Petromyzon_marinus
MGP_CAROLIEiJ_G0021541	Mrps18b	87	72.523	ENSPCIG00000014983	MRPS18B	84	69.869	Phascolarctos_cinereus
MGP_CAROLIEiJ_G0021541	Mrps18b	69	52.299	ENSPFOG00000016437	mrps18b	62	52.299	Poecilia_formosa
MGP_CAROLIEiJ_G0021541	Mrps18b	69	53.448	ENSPLAG00000002566	mrps18b	71	53.448	Poecilia_latipinna
MGP_CAROLIEiJ_G0021541	Mrps18b	69	52.299	ENSPMEG00000010978	mrps18b	61	52.299	Poecilia_mexicana
MGP_CAROLIEiJ_G0021541	Mrps18b	74	49.733	ENSPREG00000012186	mrps18b	70	49.733	Poecilia_reticulata
MGP_CAROLIEiJ_G0021541	Mrps18b	100	70.817	ENSPPYG00000016412	MRPS18B	99	70.817	Pongo_abelii
MGP_CAROLIEiJ_G0021541	Mrps18b	100	76.654	ENSPCAG00000017028	MRPS18B	99	76.654	Procavia_capensis
MGP_CAROLIEiJ_G0021541	Mrps18b	98	69.721	ENSPCOG00000015431	MRPS18B	100	69.721	Propithecus_coquereli
MGP_CAROLIEiJ_G0021541	Mrps18b	99	77.647	ENSPVAG00000003981	MRPS18B	99	77.647	Pteropus_vampyrus
MGP_CAROLIEiJ_G0021541	Mrps18b	85	47.685	ENSPNYG00000011383	mrps18b	86	47.685	Pundamilia_nyererei
MGP_CAROLIEiJ_G0021541	Mrps18b	51	46.154	ENSPNYG00000004553	-	70	46.154	Pundamilia_nyererei
MGP_CAROLIEiJ_G0021541	Mrps18b	70	54.802	ENSPNAG00000029858	mrps18b	73	54.802	Pygocentrus_nattereri
MGP_CAROLIEiJ_G0021541	Mrps18b	100	93.307	ENSRNOG00000000804	Mrps18b	98	93.307	Rattus_norvegicus
MGP_CAROLIEiJ_G0021541	Mrps18b	100	78.210	ENSRBIG00000037128	MRPS18B	99	78.210	Rhinopithecus_bieti
MGP_CAROLIEiJ_G0021541	Mrps18b	100	78.210	ENSRROG00000017497	MRPS18B	99	78.210	Rhinopithecus_roxellana
MGP_CAROLIEiJ_G0021541	Mrps18b	96	80.000	ENSSBOG00000023414	MRPS18B	100	77.823	Saimiri_boliviensis_boliviensis
MGP_CAROLIEiJ_G0021541	Mrps18b	87	69.369	ENSSHAG00000006769	MRPS18B	90	68.421	Sarcophilus_harrisii
MGP_CAROLIEiJ_G0021541	Mrps18b	69	54.237	ENSSFOG00015015664	mrps18b	77	52.432	Scleropages_formosus
MGP_CAROLIEiJ_G0021541	Mrps18b	70	55.367	ENSSMAG00000020784	mrps18b	72	55.367	Scophthalmus_maximus
MGP_CAROLIEiJ_G0021541	Mrps18b	81	48.182	ENSSDUG00000009519	mrps18b	97	46.552	Seriola_dumerili
MGP_CAROLIEiJ_G0021541	Mrps18b	60	56.579	ENSSLDG00000000473	mrps18b	55	56.863	Seriola_lalandi_dorsalis
MGP_CAROLIEiJ_G0021541	Mrps18b	72	60.989	ENSSPUG00000015230	MRPS18B	73	60.773	Sphenodon_punctatus
MGP_CAROLIEiJ_G0021541	Mrps18b	69	54.545	ENSSPAG00000004508	mrps18b	82	49.749	Stegastes_partitus
MGP_CAROLIEiJ_G0021541	Mrps18b	100	77.821	ENSSSCG00000029425	MRPS18B	99	77.821	Sus_scrofa
MGP_CAROLIEiJ_G0021541	Mrps18b	86	44.444	ENSTRUG00000022309	mrps18b	79	44.444	Takifugu_rubripes
MGP_CAROLIEiJ_G0021541	Mrps18b	100	78.210	ENSTTRG00000008313	MRPS18B	99	78.210	Tursiops_truncatus
MGP_CAROLIEiJ_G0021541	Mrps18b	100	78.599	ENSUAMG00000005833	MRPS18B	99	78.599	Ursus_americanus
MGP_CAROLIEiJ_G0021541	Mrps18b	100	78.599	ENSUMAG00000019652	MRPS18B	76	78.599	Ursus_maritimus
MGP_CAROLIEiJ_G0021541	Mrps18b	75	76.684	ENSVPAG00000001181	MRPS18B	100	76.684	Vicugna_pacos
MGP_CAROLIEiJ_G0021541	Mrps18b	100	78.906	ENSVVUG00000009631	MRPS18B	99	78.906	Vulpes_vulpes
MGP_CAROLIEiJ_G0021541	Mrps18b	80	50.990	ENSXETG00000032503	MRPS18B	89	50.990	Xenopus_tropicalis
MGP_CAROLIEiJ_G0021541	Mrps18b	73	50.538	ENSXCOG00000003011	mrps18b	92	50.538	Xiphophorus_couchianus
MGP_CAROLIEiJ_G0021541	Mrps18b	73	50.000	ENSXMAG00000016698	mrps18b	71	52.874	Xiphophorus_maculatus