EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: MGP_CAROLIEiJ_G0021547 (Gene tree)
Gene ID: 110283684
Gene Symbol: Gnl1
Alias: Gna-rs1|Gnal1
Full Name: G protein nucleolar 1 (putative)
Gene Type: protein_coding
Species: Mus_caroli
Status: putative
Strand: Plus strand
Length: 9671 bases
Position: chr17:33058455-33068125
Accession: 110283684
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CAROLIEiJ_P0044667	MMR_HSR1	PF01926.23	3.4e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CAROLIEiJ_T0044667	-	2841	-	MGP_CAROLIEiJ_P0044667	606 (aa)	XP_021004768	UPI000A317A4E
MGP_CAROLIEiJ_T0044668	-	483	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_CAROLIEiJ_G0021547's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CAROLIEiJ_G0021547's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CAROLIEiJ_G0021547	Gnl1	65	31.746	MGP_CAROLIEiJ_G0020648	Lsg1	66	31.364

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_CAROLIEiJ_G0021547	Gnl1	100	94.563	ENSG00000204590	GNL1	100	93.245	Homo_sapiens
MGP_CAROLIEiJ_G0021547	Gnl1	96	57.576	ENSAPOG00000006315	gnl1	88	58.739	Acanthochromis_polyacanthus
MGP_CAROLIEiJ_G0021547	Gnl1	100	95.222	ENSAMEG00000013421	GNL1	100	93.245	Ailuropoda_melanoleuca
MGP_CAROLIEiJ_G0021547	Gnl1	96	57.530	ENSACIG00000013539	gnl1	89	58.877	Amphilophus_citrinellus
MGP_CAROLIEiJ_G0021547	Gnl1	96	57.744	ENSAOCG00000008320	gnl1	88	58.919	Amphiprion_ocellaris
MGP_CAROLIEiJ_G0021547	Gnl1	96	57.744	ENSAPEG00000011154	gnl1	88	58.919	Amphiprion_percula
MGP_CAROLIEiJ_G0021547	Gnl1	90	60.252	ENSATEG00000020647	gnl1	89	59.640	Anabas_testudineus
MGP_CAROLIEiJ_G0021547	Gnl1	100	63.233	ENSACAG00000010395	GNL1	100	63.651	Anolis_carolinensis
MGP_CAROLIEiJ_G0021547	Gnl1	100	95.238	ENSANAG00000028106	GNL1	100	95.238	Aotus_nancymaae
MGP_CAROLIEiJ_G0021547	Gnl1	96	57.868	ENSACLG00000025394	gnl1	88	59.420	Astatotilapia_calliptera
MGP_CAROLIEiJ_G0021547	Gnl1	92	57.679	ENSAMXG00000016080	gnl1	91	58.393	Astyanax_mexicanus
MGP_CAROLIEiJ_G0021547	Gnl1	100	95.552	ENSBTAG00000025516	GNL1	100	93.575	Bos_taurus
MGP_CAROLIEiJ_G0021547	Gnl1	100	94.910	ENSCJAG00000019996	GNL1	100	92.939	Callithrix_jacchus
MGP_CAROLIEiJ_G0021547	Gnl1	100	94.234	ENSCAFG00000000396	GNL1	100	92.257	Canis_familiaris
MGP_CAROLIEiJ_G0021547	Gnl1	100	94.234	ENSCAFG00020017556	GNL1	100	92.257	Canis_lupus_dingo
MGP_CAROLIEiJ_G0021547	Gnl1	100	95.222	ENSCHIG00000019763	GNL1	100	93.245	Capra_hircus
MGP_CAROLIEiJ_G0021547	Gnl1	100	95.717	ENSTSYG00000000164	GNL1	100	93.740	Carlito_syrichta
MGP_CAROLIEiJ_G0021547	Gnl1	88	90.112	ENSCAPG00000006662	GNL1	98	87.313	Cavia_aperea
MGP_CAROLIEiJ_G0021547	Gnl1	100	90.461	ENSCPOG00000001944	GNL1	100	87.993	Cavia_porcellus
MGP_CAROLIEiJ_G0021547	Gnl1	100	95.717	ENSCCAG00000037467	GNL1	100	93.740	Cebus_capucinus
MGP_CAROLIEiJ_G0021547	Gnl1	100	95.717	ENSCATG00000045232	GNL1	100	93.740	Cercocebus_atys
MGP_CAROLIEiJ_G0021547	Gnl1	96	91.581	ENSCLAG00000012557	GNL1	100	89.519	Chinchilla_lanigera
MGP_CAROLIEiJ_G0021547	Gnl1	100	95.552	ENSCSAG00000008202	GNL1	100	93.575	Chlorocebus_sabaeus
MGP_CAROLIEiJ_G0021547	Gnl1	87	89.524	ENSCHOG00000010907	GNL1	87	82.394	Choloepus_hoffmanni
MGP_CAROLIEiJ_G0021547	Gnl1	90	70.459	ENSCPBG00000018821	GNL1	100	65.238	Chrysemys_picta_bellii
MGP_CAROLIEiJ_G0021547	Gnl1	90	50.183	ENSCING00000014499	-	100	48.188	Ciona_intestinalis
MGP_CAROLIEiJ_G0021547	Gnl1	93	49.383	ENSCSAVG00000007354	-	90	48.812	Ciona_savignyi
MGP_CAROLIEiJ_G0021547	Gnl1	100	95.717	ENSCANG00000012933	GNL1	100	93.740	Colobus_angolensis_palliatus
MGP_CAROLIEiJ_G0021547	Gnl1	100	95.888	ENSCGRG00001004986	Gnl1	100	93.421	Cricetulus_griseus_chok1gshd
MGP_CAROLIEiJ_G0021547	Gnl1	96	95.712	ENSCGRG00000014309	Gnl1	100	93.139	Cricetulus_griseus_crigri
MGP_CAROLIEiJ_G0021547	Gnl1	91	51.590	ENSCSEG00000019714	gnl1	90	50.808	Cynoglossus_semilaevis
MGP_CAROLIEiJ_G0021547	Gnl1	92	57.923	ENSCVAG00000022650	gnl1	89	57.885	Cyprinodon_variegatus
MGP_CAROLIEiJ_G0021547	Gnl1	90	58.919	ENSDARG00000061789	gnl1	89	58.514	Danio_rerio
MGP_CAROLIEiJ_G0021547	Gnl1	100	75.862	ENSDNOG00000041571	GNL1	100	74.713	Dasypus_novemcinctus
MGP_CAROLIEiJ_G0021547	Gnl1	99	42.165	FBgn0032882	Ns4	82	44.758	Drosophila_melanogaster
MGP_CAROLIEiJ_G0021547	Gnl1	51	91.374	ENSETEG00000005518	-	100	86.262	Echinops_telfairi
MGP_CAROLIEiJ_G0021547	Gnl1	55	53.425	ENSEBUG00000009531	-	75	63.569	Eptatretus_burgeri
MGP_CAROLIEiJ_G0021547	Gnl1	100	94.728	ENSEASG00005018610	GNL1	100	92.751	Equus_asinus_asinus
MGP_CAROLIEiJ_G0021547	Gnl1	100	94.893	ENSECAG00000023081	GNL1	100	92.916	Equus_caballus
MGP_CAROLIEiJ_G0021547	Gnl1	90	59.823	ENSELUG00000006281	gnl1	89	59.964	Esox_lucius
MGP_CAROLIEiJ_G0021547	Gnl1	100	95.222	ENSFCAG00000007676	GNL1	100	93.245	Felis_catus
MGP_CAROLIEiJ_G0021547	Gnl1	87	90.909	ENSFDAG00000000584	GNL1	100	88.068	Fukomys_damarensis
MGP_CAROLIEiJ_G0021547	Gnl1	90	59.677	ENSFHEG00000011353	gnl1	89	59.066	Fundulus_heteroclitus
MGP_CAROLIEiJ_G0021547	Gnl1	90	59.140	ENSGMOG00000015224	gnl1	90	58.094	Gadus_morhua
MGP_CAROLIEiJ_G0021547	Gnl1	90	59.099	ENSGAFG00000014611	gnl1	88	58.484	Gambusia_affinis
MGP_CAROLIEiJ_G0021547	Gnl1	92	58.290	ENSGACG00000009765	gnl1	91	57.522	Gasterosteus_aculeatus
MGP_CAROLIEiJ_G0021547	Gnl1	100	94.563	ENSGGOG00000014590	GNL1	100	93.245	Gorilla_gorilla
MGP_CAROLIEiJ_G0021547	Gnl1	96	57.868	ENSHBUG00000016745	gnl1	88	59.420	Haplochromis_burtoni
MGP_CAROLIEiJ_G0021547	Gnl1	100	89.198	ENSHGLG00000017193	GNL1	100	87.070	Heterocephalus_glaber_female
MGP_CAROLIEiJ_G0021547	Gnl1	87	87.500	ENSHGLG00100009994	GNL1	100	86.174	Heterocephalus_glaber_male
MGP_CAROLIEiJ_G0021547	Gnl1	93	58.783	ENSHCOG00000012493	gnl1	89	58.993	Hippocampus_comes
MGP_CAROLIEiJ_G0021547	Gnl1	90	59.025	ENSIPUG00000004850	gnl1	89	59.099	Ictalurus_punctatus
MGP_CAROLIEiJ_G0021547	Gnl1	100	95.222	ENSSTOG00000011822	GNL1	100	93.245	Ictidomys_tridecemlineatus
MGP_CAROLIEiJ_G0021547	Gnl1	100	93.421	ENSJJAG00000010831	-	100	90.954	Jaculus_jaculus
MGP_CAROLIEiJ_G0021547	Gnl1	90	58.993	ENSKMAG00000009059	gnl1	89	58.378	Kryptolebias_marmoratus
MGP_CAROLIEiJ_G0021547	Gnl1	90	58.993	ENSLBEG00000011038	gnl1	89	58.993	Labrus_bergylta
MGP_CAROLIEiJ_G0021547	Gnl1	100	66.884	ENSLACG00000001713	GNL1	89	68.624	Latimeria_chalumnae
MGP_CAROLIEiJ_G0021547	Gnl1	100	93.575	ENSLAFG00000030406	GNL1	100	91.763	Loxodonta_africana
MGP_CAROLIEiJ_G0021547	Gnl1	100	95.717	ENSMFAG00000001167	GNL1	100	93.740	Macaca_fascicularis
MGP_CAROLIEiJ_G0021547	Gnl1	100	95.717	ENSMMUG00000020077	GNL1	100	93.740	Macaca_mulatta
MGP_CAROLIEiJ_G0021547	Gnl1	100	95.717	ENSMNEG00000031618	GNL1	100	93.740	Macaca_nemestrina
MGP_CAROLIEiJ_G0021547	Gnl1	100	95.717	ENSMLEG00000030252	GNL1	100	93.740	Mandrillus_leucophaeus
MGP_CAROLIEiJ_G0021547	Gnl1	96	57.744	ENSMAMG00000003554	gnl1	89	59.279	Mastacembelus_armatus
MGP_CAROLIEiJ_G0021547	Gnl1	96	57.868	ENSMZEG00005018216	gnl1	88	59.420	Maylandia_zebra
MGP_CAROLIEiJ_G0021547	Gnl1	100	92.939	ENSMAUG00000015596	Gnl1	100	90.640	Mesocricetus_auratus
MGP_CAROLIEiJ_G0021547	Gnl1	100	95.222	ENSMICG00000014708	GNL1	100	93.245	Microcebus_murinus
MGP_CAROLIEiJ_G0021547	Gnl1	100	96.540	ENSMOCG00000020934	Gnl1	100	96.540	Microtus_ochrogaster
MGP_CAROLIEiJ_G0021547	Gnl1	96	55.912	ENSMMOG00000015833	gnl1	89	56.912	Mola_mola
MGP_CAROLIEiJ_G0021547	Gnl1	100	80.528	ENSMODG00000015964	GNL1	95	80.528	Monodelphis_domestica
MGP_CAROLIEiJ_G0021547	Gnl1	92	58.507	ENSMALG00000022523	gnl1	89	58.961	Monopterus_albus
MGP_CAROLIEiJ_G0021547	Gnl1	100	99.341	ENSMUSG00000024429	Gnl1	100	99.341	Mus_musculus
MGP_CAROLIEiJ_G0021547	Gnl1	100	99.671	MGP_PahariEiJ_G0020539	Gnl1	100	99.671	Mus_pahari
MGP_CAROLIEiJ_G0021547	Gnl1	100	99.176	MGP_SPRETEiJ_G0022452	Gnl1	100	99.176	Mus_spretus
MGP_CAROLIEiJ_G0021547	Gnl1	96	94.511	ENSMPUG00000011828	GNL1	79	92.281	Mustela_putorius_furo
MGP_CAROLIEiJ_G0021547	Gnl1	96	90.614	ENSMLUG00000008722	GNL1	97	87.372	Myotis_lucifugus
MGP_CAROLIEiJ_G0021547	Gnl1	100	94.728	ENSNGAG00000000745	Gnl1	100	92.751	Nannospalax_galili
MGP_CAROLIEiJ_G0021547	Gnl1	96	57.699	ENSNBRG00000020813	gnl1	89	59.239	Neolamprologus_brichardi
MGP_CAROLIEiJ_G0021547	Gnl1	95	92.069	ENSNLEG00000005058	GNL1	79	92.405	Nomascus_leucogenys
MGP_CAROLIEiJ_G0021547	Gnl1	87	92.789	ENSOPRG00000000007	GNL1	100	90.892	Ochotona_princeps
MGP_CAROLIEiJ_G0021547	Gnl1	100	90.148	ENSODEG00000018111	GNL1	100	88.177	Octodon_degus
MGP_CAROLIEiJ_G0021547	Gnl1	96	57.868	ENSONIG00000013044	gnl1	88	59.420	Oreochromis_niloticus
MGP_CAROLIEiJ_G0021547	Gnl1	100	92.916	ENSOCUG00000002110	GNL1	100	91.598	Oryctolagus_cuniculus
MGP_CAROLIEiJ_G0021547	Gnl1	90	58.273	ENSORLG00000012862	gnl1	89	57.658	Oryzias_latipes
MGP_CAROLIEiJ_G0021547	Gnl1	90	58.453	ENSORLG00020003923	gnl1	89	57.838	Oryzias_latipes_hni
MGP_CAROLIEiJ_G0021547	Gnl1	90	58.273	ENSORLG00015009552	gnl1	89	57.658	Oryzias_latipes_hsok
MGP_CAROLIEiJ_G0021547	Gnl1	96	56.661	ENSOMEG00000014409	gnl1	89	57.838	Oryzias_melastigma
MGP_CAROLIEiJ_G0021547	Gnl1	100	95.387	ENSOGAG00000004428	-	100	93.410	Otolemur_garnettii
MGP_CAROLIEiJ_G0021547	Gnl1	98	89.430	ENSOGAG00000024106	-	100	88.571	Otolemur_garnettii
MGP_CAROLIEiJ_G0021547	Gnl1	100	92.846	ENSOARG00000012966	GNL1	100	90.894	Ovis_aries
MGP_CAROLIEiJ_G0021547	Gnl1	100	94.893	ENSPPAG00000044009	GNL1	100	93.575	Pan_paniscus
MGP_CAROLIEiJ_G0021547	Gnl1	100	94.893	ENSPPRG00000007039	GNL1	100	92.916	Panthera_pardus
MGP_CAROLIEiJ_G0021547	Gnl1	100	94.728	ENSPTIG00000011307	GNL1	100	92.751	Panthera_tigris_altaica
MGP_CAROLIEiJ_G0021547	Gnl1	99	94.536	ENSPTRG00000017928	GNL1	99	93.212	Pan_troglodytes
MGP_CAROLIEiJ_G0021547	Gnl1	100	95.717	ENSPANG00000020097	GNL1	100	93.740	Papio_anubis
MGP_CAROLIEiJ_G0021547	Gnl1	90	60.766	ENSPKIG00000002200	gnl1	89	60.217	Paramormyrops_kingsleyae
MGP_CAROLIEiJ_G0021547	Gnl1	94	55.119	ENSPSIG00000008441	GNL1	98	54.957	Pelodiscus_sinensis
MGP_CAROLIEiJ_G0021547	Gnl1	90	59.640	ENSPMGG00000007259	gnl1	90	59.640	Periophthalmus_magnuspinnatus
MGP_CAROLIEiJ_G0021547	Gnl1	97	94.898	ENSPEMG00000002731	Gnl1	99	93.482	Peromyscus_maniculatus_bairdii
MGP_CAROLIEiJ_G0021547	Gnl1	100	82.343	ENSPCIG00000014975	GNL1	100	82.343	Phascolarctos_cinereus
MGP_CAROLIEiJ_G0021547	Gnl1	90	59.820	ENSPFOG00000015398	gnl1	89	59.206	Poecilia_formosa
MGP_CAROLIEiJ_G0021547	Gnl1	90	59.640	ENSPLAG00000003231	gnl1	88	59.206	Poecilia_latipinna
MGP_CAROLIEiJ_G0021547	Gnl1	90	60.180	ENSPMEG00000005001	gnl1	89	59.747	Poecilia_mexicana
MGP_CAROLIEiJ_G0021547	Gnl1	90	60.000	ENSPREG00000012818	gnl1	89	59.567	Poecilia_reticulata
MGP_CAROLIEiJ_G0021547	Gnl1	100	95.881	ENSPPYG00000016408	GNL1	100	93.904	Pongo_abelii
MGP_CAROLIEiJ_G0021547	Gnl1	56	98.000	ENSPCAG00000004522	-	70	98.000	Procavia_capensis
MGP_CAROLIEiJ_G0021547	Gnl1	100	95.717	ENSPCOG00000015669	GNL1	100	93.740	Propithecus_coquereli
MGP_CAROLIEiJ_G0021547	Gnl1	100	93.596	ENSPVAG00000003970	GNL1	100	91.297	Pteropus_vampyrus
MGP_CAROLIEiJ_G0021547	Gnl1	96	57.699	ENSPNYG00000022614	gnl1	88	59.239	Pundamilia_nyererei
MGP_CAROLIEiJ_G0021547	Gnl1	90	59.964	ENSPNAG00000021257	gnl1	89	59.489	Pygocentrus_nattereri
MGP_CAROLIEiJ_G0021547	Gnl1	100	97.364	ENSRNOG00000000798	Gnl1	100	97.364	Rattus_norvegicus
MGP_CAROLIEiJ_G0021547	Gnl1	100	95.717	ENSRBIG00000019143	GNL1	100	93.740	Rhinopithecus_bieti
MGP_CAROLIEiJ_G0021547	Gnl1	100	95.717	ENSRROG00000030029	GNL1	100	93.740	Rhinopithecus_roxellana
MGP_CAROLIEiJ_G0021547	Gnl1	100	95.717	ENSSBOG00000031909	GNL1	100	93.740	Saimiri_boliviensis_boliviensis
MGP_CAROLIEiJ_G0021547	Gnl1	100	80.231	ENSSHAG00000007557	GNL1	100	78.053	Sarcophilus_harrisii
MGP_CAROLIEiJ_G0021547	Gnl1	90	62.842	ENSSFOG00015013921	gnl1	88	62.271	Scleropages_formosus
MGP_CAROLIEiJ_G0021547	Gnl1	91	58.423	ENSSMAG00000010147	gnl1	89	57.810	Scophthalmus_maximus
MGP_CAROLIEiJ_G0021547	Gnl1	96	57.576	ENSSDUG00000013824	gnl1	88	59.532	Seriola_dumerili
MGP_CAROLIEiJ_G0021547	Gnl1	96	57.815	ENSSLDG00000024560	gnl1	88	59.785	Seriola_lalandi_dorsalis
MGP_CAROLIEiJ_G0021547	Gnl1	56	94.167	ENSSARG00000006156	-	84	90.000	Sorex_araneus
MGP_CAROLIEiJ_G0021547	Gnl1	90	70.384	ENSSPUG00000015374	GNL1	100	64.734	Sphenodon_punctatus
MGP_CAROLIEiJ_G0021547	Gnl1	90	60.072	ENSSPAG00000017541	gnl1	88	59.099	Stegastes_partitus
MGP_CAROLIEiJ_G0021547	Gnl1	100	95.552	ENSSSCG00000001372	GNL1	100	93.575	Sus_scrofa
MGP_CAROLIEiJ_G0021547	Gnl1	90	57.685	ENSTRUG00000011226	gnl1	85	56.522	Takifugu_rubripes
MGP_CAROLIEiJ_G0021547	Gnl1	90	57.790	ENSTNIG00000008017	gnl1	91	57.790	Tetraodon_nigroviridis
MGP_CAROLIEiJ_G0021547	Gnl1	100	88.468	ENSTBEG00000007538	GNL1	100	86.491	Tupaia_belangeri
MGP_CAROLIEiJ_G0021547	Gnl1	100	93.740	ENSTTRG00000008287	GNL1	100	92.079	Tursiops_truncatus
MGP_CAROLIEiJ_G0021547	Gnl1	100	94.893	ENSUAMG00000007671	GNL1	100	92.916	Ursus_americanus
MGP_CAROLIEiJ_G0021547	Gnl1	100	89.853	ENSUMAG00000018935	GNL1	100	95.082	Ursus_maritimus
MGP_CAROLIEiJ_G0021547	Gnl1	100	94.234	ENSVVUG00000009537	GNL1	100	92.257	Vulpes_vulpes
MGP_CAROLIEiJ_G0021547	Gnl1	100	61.290	ENSXETG00000024087	gnl1	100	61.327	Xenopus_tropicalis
MGP_CAROLIEiJ_G0021547	Gnl1	92	59.894	ENSXCOG00000019185	gnl1	88	59.601	Xiphophorus_couchianus
MGP_CAROLIEiJ_G0021547	Gnl1	92	59.717	ENSXMAG00000011015	gnl1	88	59.420	Xiphophorus_maculatus