EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_CAROLIEiJ_G0021680 (Gene tree)
Gene ID: 110312571
Gene Symbol: Rrp36
Alias: BC011248
Full Name: kelch domain containing 3
Gene Type: protein_coding
Species: Mus_caroli
Status: putative
Strand: Minus strand
Length: 6390 bases
Position: chr17:43381972-43388361
Accession: 110312571
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CAROLIEiJ_P0045039	RRP36	PF06102.12	5.8e-48	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CAROLIEiJ_T0045039	-	735	-	MGP_CAROLIEiJ_P0045039	244 (aa)	XP_021041934	UPI000A31A903

Gene Model

Click here to download MGP_CAROLIEiJ_G0021680's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CAROLIEiJ_G0021680's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_CAROLIEiJ_G0021680	Rrp36	87	86.977	ENSG00000124541	RRP36	98	79.051	Homo_sapiens
MGP_CAROLIEiJ_G0021680	Rrp36	85	52.404	ENSAPOG00000022015	rrp36	79	50.450	Acanthochromis_polyacanthus
MGP_CAROLIEiJ_G0021680	Rrp36	91	51.351	ENSACIG00000020578	-	78	43.568	Amphilophus_citrinellus
MGP_CAROLIEiJ_G0021680	Rrp36	85	53.365	ENSAOCG00000013439	rrp36	64	52.404	Amphiprion_ocellaris
MGP_CAROLIEiJ_G0021680	Rrp36	85	53.365	ENSAPEG00000020996	rrp36	64	52.404	Amphiprion_percula
MGP_CAROLIEiJ_G0021680	Rrp36	86	51.415	ENSATEG00000016946	rrp36	61	51.415	Anabas_testudineus
MGP_CAROLIEiJ_G0021680	Rrp36	96	78.776	ENSANAG00000021773	RRP36	96	78.776	Aotus_nancymaae
MGP_CAROLIEiJ_G0021680	Rrp36	86	42.584	ENSACLG00000008408	rrp36	88	42.584	Astatotilapia_calliptera
MGP_CAROLIEiJ_G0021680	Rrp36	85	42.995	ENSACLG00000013982	RRP36	85	42.105	Astatotilapia_calliptera
MGP_CAROLIEiJ_G0021680	Rrp36	100	80.972	ENSBTAG00000053873	RRP36	100	80.972	Bos_taurus
MGP_CAROLIEiJ_G0021680	Rrp36	99	77.600	ENSCJAG00000004943	RRP36	91	82.328	Callithrix_jacchus
MGP_CAROLIEiJ_G0021680	Rrp36	95	81.197	ENSCAFG00020011057	RRP36	94	84.475	Canis_lupus_dingo
MGP_CAROLIEiJ_G0021680	Rrp36	100	77.866	ENSCHIG00000016354	-	100	77.866	Capra_hircus
MGP_CAROLIEiJ_G0021680	Rrp36	93	78.788	ENSCHIG00000003210	-	99	78.788	Capra_hircus
MGP_CAROLIEiJ_G0021680	Rrp36	100	60.324	ENSCHIG00000019781	-	100	60.324	Capra_hircus
MGP_CAROLIEiJ_G0021680	Rrp36	97	76.210	ENSTSYG00000037176	RRP36	97	76.210	Carlito_syrichta
MGP_CAROLIEiJ_G0021680	Rrp36	86	82.857	ENSCAPG00000010983	RRP36	91	82.857	Cavia_aperea
MGP_CAROLIEiJ_G0021680	Rrp36	86	82.075	ENSCPOG00000025932	RRP36	95	82.075	Cavia_porcellus
MGP_CAROLIEiJ_G0021680	Rrp36	96	79.592	ENSCCAG00000000048	RRP36	96	79.592	Cebus_capucinus
MGP_CAROLIEiJ_G0021680	Rrp36	87	86.047	ENSCATG00000041903	RRP36	84	86.047	Cercocebus_atys
MGP_CAROLIEiJ_G0021680	Rrp36	93	81.659	ENSCLAG00000013166	RRP36	100	81.659	Chinchilla_lanigera
MGP_CAROLIEiJ_G0021680	Rrp36	87	86.977	ENSCSAG00000011553	RRP36	99	77.255	Chlorocebus_sabaeus
MGP_CAROLIEiJ_G0021680	Rrp36	88	55.605	ENSCPBG00000003555	RRP36	60	55.605	Chrysemys_picta_bellii
MGP_CAROLIEiJ_G0021680	Rrp36	87	35.780	ENSCING00000012193	-	85	35.780	Ciona_intestinalis
MGP_CAROLIEiJ_G0021680	Rrp36	74	38.743	ENSCSAVG00000002672	-	84	38.743	Ciona_savignyi
MGP_CAROLIEiJ_G0021680	Rrp36	87	86.977	ENSCANG00000035127	RRP36	85	86.977	Colobus_angolensis_palliatus
MGP_CAROLIEiJ_G0021680	Rrp36	93	88.053	ENSCGRG00001021461	Rrp36	100	88.053	Cricetulus_griseus_chok1gshd
MGP_CAROLIEiJ_G0021680	Rrp36	93	88.053	ENSCGRG00000006286	Rrp36	100	88.053	Cricetulus_griseus_crigri
MGP_CAROLIEiJ_G0021680	Rrp36	87	52.336	ENSCSEG00000001039	RRP36	65	52.336	Cynoglossus_semilaevis
MGP_CAROLIEiJ_G0021680	Rrp36	85	46.411	ENSCVAG00000017798	rrp36	92	46.890	Cyprinodon_variegatus
MGP_CAROLIEiJ_G0021680	Rrp36	88	50.000	ENSDARG00000032516	rrp36	81	44.061	Danio_rerio
MGP_CAROLIEiJ_G0021680	Rrp36	93	80.088	ENSDORG00000012186	Rrp36	97	80.088	Dipodomys_ordii
MGP_CAROLIEiJ_G0021680	Rrp36	86	33.937	FBgn0038235	CG8461	99	32.258	Drosophila_melanogaster
MGP_CAROLIEiJ_G0021680	Rrp36	92	84.211	ENSEASG00005003169	RRP36	99	84.211	Equus_asinus_asinus
MGP_CAROLIEiJ_G0021680	Rrp36	92	83.772	ENSECAG00000040238	RRP36	99	83.772	Equus_caballus
MGP_CAROLIEiJ_G0021680	Rrp36	99	62.449	ENSEEUG00000010515	RRP36	96	62.449	Erinaceus_europaeus
MGP_CAROLIEiJ_G0021680	Rrp36	91	48.889	ENSELUG00000016840	rrp36	62	49.107	Esox_lucius
MGP_CAROLIEiJ_G0021680	Rrp36	98	80.328	ENSFCAG00000043818	RRP36	95	80.328	Felis_catus
MGP_CAROLIEiJ_G0021680	Rrp36	86	84.579	ENSFDAG00000010380	RRP36	99	84.579	Fukomys_damarensis
MGP_CAROLIEiJ_G0021680	Rrp36	76	49.198	ENSFHEG00000000761	rrp36	94	49.198	Fundulus_heteroclitus
MGP_CAROLIEiJ_G0021680	Rrp36	90	47.297	ENSGAFG00000017817	rrp36	67	44.538	Gambusia_affinis
MGP_CAROLIEiJ_G0021680	Rrp36	93	48.908	ENSGACG00000019603	RRP36	70	48.908	Gasterosteus_aculeatus
MGP_CAROLIEiJ_G0021680	Rrp36	98	78.884	ENSGGOG00000037384	RRP36	99	78.884	Gorilla_gorilla
MGP_CAROLIEiJ_G0021680	Rrp36	93	46.087	ENSHBUG00000008974	RRP36	71	46.087	Haplochromis_burtoni
MGP_CAROLIEiJ_G0021680	Rrp36	88	82.949	ENSHGLG00000018082	RRP36	85	82.949	Heterocephalus_glaber_female
MGP_CAROLIEiJ_G0021680	Rrp36	88	82.949	ENSHGLG00100019303	RRP36	85	82.949	Heterocephalus_glaber_male
MGP_CAROLIEiJ_G0021680	Rrp36	57	51.079	ENSHCOG00000010303	rrp36	63	46.853	Hippocampus_comes
MGP_CAROLIEiJ_G0021680	Rrp36	86	47.847	ENSIPUG00000016548	rrp36	70	47.847	Ictalurus_punctatus
MGP_CAROLIEiJ_G0021680	Rrp36	95	80.851	ENSSTOG00000009511	RRP36	99	80.851	Ictidomys_tridecemlineatus
MGP_CAROLIEiJ_G0021680	Rrp36	91	82.511	ENSJJAG00000023363	Rrp36	99	82.511	Jaculus_jaculus
MGP_CAROLIEiJ_G0021680	Rrp36	85	51.923	ENSKMAG00000006968	rrp36	67	47.863	Kryptolebias_marmoratus
MGP_CAROLIEiJ_G0021680	Rrp36	93	43.580	ENSLBEG00000017728	-	70	43.629	Labrus_bergylta
MGP_CAROLIEiJ_G0021680	Rrp36	85	54.327	ENSLACG00000001888	rrp36	65	54.327	Latimeria_chalumnae
MGP_CAROLIEiJ_G0021680	Rrp36	86	52.857	ENSLOCG00000015862	RRP36	60	52.857	Lepisosteus_oculatus
MGP_CAROLIEiJ_G0021680	Rrp36	87	80.930	ENSLAFG00000032704	RRP36	100	80.930	Loxodonta_africana
MGP_CAROLIEiJ_G0021680	Rrp36	87	86.977	ENSMFAG00000003547	RRP36	98	78.906	Macaca_fascicularis
MGP_CAROLIEiJ_G0021680	Rrp36	87	86.512	ENSMNEG00000044747	RRP36	98	78.516	Macaca_nemestrina
MGP_CAROLIEiJ_G0021680	Rrp36	87	86.512	ENSMLEG00000034272	RRP36	98	78.516	Mandrillus_leucophaeus
MGP_CAROLIEiJ_G0021680	Rrp36	86	51.415	ENSMAMG00000019157	-	58	51.415	Mastacembelus_armatus
MGP_CAROLIEiJ_G0021680	Rrp36	85	48.558	ENSMZEG00005015204	RRP36	64	48.558	Maylandia_zebra
MGP_CAROLIEiJ_G0021680	Rrp36	91	86.878	ENSMAUG00000003648	Rrp36	97	86.878	Mesocricetus_auratus
MGP_CAROLIEiJ_G0021680	Rrp36	100	77.075	ENSMICG00000045230	RRP36	100	77.075	Microcebus_murinus
MGP_CAROLIEiJ_G0021680	Rrp36	99	83.884	ENSMOCG00000002009	Rrp36	99	83.884	Microtus_ochrogaster
MGP_CAROLIEiJ_G0021680	Rrp36	93	44.304	ENSMMOG00000018637	-	71	44.351	Mola_mola
MGP_CAROLIEiJ_G0021680	Rrp36	60	57.333	ENSMODG00000029304	-	82	59.375	Monodelphis_domestica
MGP_CAROLIEiJ_G0021680	Rrp36	86	49.057	ENSMALG00000008142	-	75	45.570	Monopterus_albus
MGP_CAROLIEiJ_G0021680	Rrp36	100	94.672	ENSMUSG00000023971	Rrp36	100	95.575	Mus_musculus
MGP_CAROLIEiJ_G0021680	Rrp36	93	94.273	MGP_PahariEiJ_G0020671	Rrp36	100	94.273	Mus_pahari
MGP_CAROLIEiJ_G0021680	Rrp36	100	95.082	MGP_SPRETEiJ_G0022592	Rrp36	100	95.082	Mus_spretus
MGP_CAROLIEiJ_G0021680	Rrp36	55	75.188	ENSNGAG00000021177	-	85	77.600	Nannospalax_galili
MGP_CAROLIEiJ_G0021680	Rrp36	87	86.977	ENSNLEG00000033289	RRP36	100	86.977	Nomascus_leucogenys
MGP_CAROLIEiJ_G0021680	Rrp36	68	66.061	ENSMEUG00000007149	-	99	65.455	Notamacropus_eugenii
MGP_CAROLIEiJ_G0021680	Rrp36	80	84.772	ENSOPRG00000002274	RRP36	80	84.772	Ochotona_princeps
MGP_CAROLIEiJ_G0021680	Rrp36	93	77.729	ENSODEG00000015915	RRP36	100	77.729	Octodon_degus
MGP_CAROLIEiJ_G0021680	Rrp36	85	50.481	ENSONIG00000015983	rrp36	76	45.607	Oreochromis_niloticus
MGP_CAROLIEiJ_G0021680	Rrp36	85	50.242	ENSORLG00000029500	rrp36	66	48.444	Oryzias_latipes
MGP_CAROLIEiJ_G0021680	Rrp36	85	50.962	ENSORLG00020017452	-	66	49.115	Oryzias_latipes_hni
MGP_CAROLIEiJ_G0021680	Rrp36	85	51.208	ENSORLG00015016898	rrp36	70	47.500	Oryzias_latipes_hsok
MGP_CAROLIEiJ_G0021680	Rrp36	86	51.196	ENSOMEG00000008623	RRP36	62	51.691	Oryzias_melastigma
MGP_CAROLIEiJ_G0021680	Rrp36	87	82.326	ENSOGAG00000012699	RRP36	93	82.326	Otolemur_garnettii
MGP_CAROLIEiJ_G0021680	Rrp36	99	67.480	ENSPPAG00000042831	-	96	66.260	Pan_paniscus
MGP_CAROLIEiJ_G0021680	Rrp36	93	83.621	ENSPPRG00000014610	RRP36	92	83.621	Panthera_pardus
MGP_CAROLIEiJ_G0021680	Rrp36	93	83.621	ENSPTIG00000010853	RRP36	92	83.621	Panthera_tigris_altaica
MGP_CAROLIEiJ_G0021680	Rrp36	87	87.442	ENSPTRG00000018184	RRP36	98	79.842	Pan_troglodytes
MGP_CAROLIEiJ_G0021680	Rrp36	87	86.977	ENSPANG00000025140	RRP36	98	78.906	Papio_anubis
MGP_CAROLIEiJ_G0021680	Rrp36	87	52.358	ENSPKIG00000004303	rrp36	62	52.358	Paramormyrops_kingsleyae
MGP_CAROLIEiJ_G0021680	Rrp36	86	45.283	ENSPMGG00000016870	rrp36	66	45.283	Periophthalmus_magnuspinnatus
MGP_CAROLIEiJ_G0021680	Rrp36	93	88.496	ENSPEMG00000007015	Rrp36	100	88.496	Peromyscus_maniculatus_bairdii
MGP_CAROLIEiJ_G0021680	Rrp36	100	65.873	ENSPCIG00000009179	RRP36	100	65.873	Phascolarctos_cinereus
MGP_CAROLIEiJ_G0021680	Rrp36	91	48.198	ENSPFOG00000011959	rrp36	57	48.198	Poecilia_formosa
MGP_CAROLIEiJ_G0021680	Rrp36	91	47.748	ENSPLAG00000023901	rrp36	63	47.748	Poecilia_latipinna
MGP_CAROLIEiJ_G0021680	Rrp36	91	48.198	ENSPMEG00000024099	rrp36	62	48.198	Poecilia_mexicana
MGP_CAROLIEiJ_G0021680	Rrp36	89	48.858	ENSPREG00000022787	rrp36	61	48.858	Poecilia_reticulata
MGP_CAROLIEiJ_G0021680	Rrp36	87	86.512	ENSPPYG00000016628	RRP36	98	76.680	Pongo_abelii
MGP_CAROLIEiJ_G0021680	Rrp36	100	76.000	ENSPCOG00000018401	RRP36	100	76.000	Propithecus_coquereli
MGP_CAROLIEiJ_G0021680	Rrp36	98	79.835	ENSPVAG00000008714	RRP36	99	79.835	Pteropus_vampyrus
MGP_CAROLIEiJ_G0021680	Rrp36	85	48.558	ENSPNYG00000018030	RRP36	64	48.558	Pundamilia_nyererei
MGP_CAROLIEiJ_G0021680	Rrp36	98	46.800	ENSPNAG00000027207	rrp36	70	46.800	Pygocentrus_nattereri
MGP_CAROLIEiJ_G0021680	Rrp36	100	88.525	ENSRNOG00000017836	Rrp36	100	88.525	Rattus_norvegicus
MGP_CAROLIEiJ_G0021680	Rrp36	99	77.953	ENSRBIG00000040019	RRP36	98	77.953	Rhinopithecus_bieti
MGP_CAROLIEiJ_G0021680	Rrp36	99	77.559	ENSRROG00000040721	RRP36	98	77.559	Rhinopithecus_roxellana
MGP_CAROLIEiJ_G0021680	Rrp36	92	81.034	ENSSBOG00000030228	RRP36	93	81.034	Saimiri_boliviensis_boliviensis
MGP_CAROLIEiJ_G0021680	Rrp36	86	48.325	ENSSFOG00015023058	rrp36	62	48.325	Scleropages_formosus
MGP_CAROLIEiJ_G0021680	Rrp36	90	51.786	ENSSMAG00000020911	-	62	50.220	Scophthalmus_maximus
MGP_CAROLIEiJ_G0021680	Rrp36	89	51.101	ENSSDUG00000018924	rrp36	63	50.220	Seriola_dumerili
MGP_CAROLIEiJ_G0021680	Rrp36	84	52.427	ENSSLDG00000019741	RRP36	96	50.971	Seriola_lalandi_dorsalis
MGP_CAROLIEiJ_G0021680	Rrp36	87	82.629	ENSSARG00000000873	RRP36	99	82.629	Sorex_araneus
MGP_CAROLIEiJ_G0021680	Rrp36	88	57.870	ENSSPUG00000000213	RRP36	60	57.870	Sphenodon_punctatus
MGP_CAROLIEiJ_G0021680	Rrp36	85	54.028	ENSSPAG00000017154	rrp36	79	46.018	Stegastes_partitus
MGP_CAROLIEiJ_G0021680	Rrp36	92	58.772	ENSSSCG00000037862	-	100	57.018	Sus_scrofa
MGP_CAROLIEiJ_G0021680	Rrp36	100	80.972	ENSSSCG00000001656	RRP36	98	80.972	Sus_scrofa
MGP_CAROLIEiJ_G0021680	Rrp36	86	45.972	ENSTRUG00000021893	rrp36	64	45.972	Takifugu_rubripes
MGP_CAROLIEiJ_G0021680	Rrp36	86	46.226	ENSTNIG00000004741	rrp36	85	45.161	Tetraodon_nigroviridis
MGP_CAROLIEiJ_G0021680	Rrp36	87	73.023	ENSTBEG00000012326	RRP36	100	73.023	Tupaia_belangeri
MGP_CAROLIEiJ_G0021680	Rrp36	87	84.186	ENSTTRG00000007001	RRP36	100	76.518	Tursiops_truncatus
MGP_CAROLIEiJ_G0021680	Rrp36	98	78.423	ENSUAMG00000015865	RRP36	98	78.423	Ursus_americanus
MGP_CAROLIEiJ_G0021680	Rrp36	67	92.638	ENSUMAG00000008726	RRP36	100	92.638	Ursus_maritimus
MGP_CAROLIEiJ_G0021680	Rrp36	87	87.442	ENSVPAG00000008904	RRP36	100	87.442	Vicugna_pacos
MGP_CAROLIEiJ_G0021680	Rrp36	95	81.197	ENSVVUG00000027816	RRP36	94	84.475	Vulpes_vulpes
MGP_CAROLIEiJ_G0021680	Rrp36	86	48.341	ENSXCOG00000011238	rrp36	90	43.810	Xiphophorus_couchianus