EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_CAROLIEiJ_G0021912 (Gene tree)
Gene ID: 110283861
Gene Symbol: Thumpd2
Alias: 2810025A12Rik
Full Name: THUMP domain containing 2
Gene Type: protein_coding
Species: Mus_caroli
Status: putative
Strand: Minus strand
Length: 36221 bases
Position: chr17:76752749-76788969
Accession: 110283861
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CAROLIEiJ_P0045720	THUMP	PF02926.17	1.3e-05	1	1
MGP_CAROLIEiJ_P0045720	MTS	PF05175.14	4.1e-06	1	1
MGP_CAROLIEiJ_P0045720	UPF0020	PF01170.18	3.7e-26	1	1
MGP_CAROLIEiJ_P0045720	Methyltransf_31	PF13847.6	9.7e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CAROLIEiJ_T0045720	-	1857	XM_021149410	MGP_CAROLIEiJ_P0045720	528 (aa)	XP_021005069	UPI000A315340

Gene Model

Click here to download MGP_CAROLIEiJ_G0021912's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CAROLIEiJ_G0021912's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_CAROLIEiJ_G0021912	Thumpd2	95	68.651	ENSG00000138050	THUMPD2	89	83.333	Homo_sapiens
MGP_CAROLIEiJ_G0021912	Thumpd2	74	43.098	ENSAPOG00000001802	-	67	43.098	Acanthochromis_polyacanthus
MGP_CAROLIEiJ_G0021912	Thumpd2	87	66.739	ENSAMEG00000008664	THUMPD2	99	66.739	Ailuropoda_melanoleuca
MGP_CAROLIEiJ_G0021912	Thumpd2	75	36.296	ENSACIG00000011677	THUMPD2	84	36.296	Amphilophus_citrinellus
MGP_CAROLIEiJ_G0021912	Thumpd2	74	42.712	ENSAOCG00000000927	THUMPD2	69	42.712	Amphiprion_ocellaris
MGP_CAROLIEiJ_G0021912	Thumpd2	76	42.373	ENSAPEG00000000981	thumpd2	69	42.373	Amphiprion_percula
MGP_CAROLIEiJ_G0021912	Thumpd2	77	42.500	ENSATEG00000012329	thumpd2	66	42.500	Anabas_testudineus
MGP_CAROLIEiJ_G0021912	Thumpd2	89	48.554	ENSAPLG00000008775	THUMPD2	99	49.383	Anas_platyrhynchos
MGP_CAROLIEiJ_G0021912	Thumpd2	88	48.089	ENSACAG00000000538	THUMPD2	98	48.089	Anolis_carolinensis
MGP_CAROLIEiJ_G0021912	Thumpd2	95	68.849	ENSANAG00000034298	THUMPD2	100	68.849	Aotus_nancymaae
MGP_CAROLIEiJ_G0021912	Thumpd2	93	36.902	ENSACLG00000025840	thumpd2	90	46.835	Astatotilapia_calliptera
MGP_CAROLIEiJ_G0021912	Thumpd2	73	35.459	ENSAMXG00000011080	thumpd2	97	34.631	Astyanax_mexicanus
MGP_CAROLIEiJ_G0021912	Thumpd2	95	66.600	ENSBTAG00000004722	THUMPD2	99	66.600	Bos_taurus
MGP_CAROLIEiJ_G0021912	Thumpd2	95	68.651	ENSCJAG00000014891	THUMPD2	100	68.651	Callithrix_jacchus
MGP_CAROLIEiJ_G0021912	Thumpd2	95	67.992	ENSCAFG00000006471	THUMPD2	100	67.992	Canis_familiaris
MGP_CAROLIEiJ_G0021912	Thumpd2	89	67.865	ENSCAFG00020021695	THUMPD2	100	67.865	Canis_lupus_dingo
MGP_CAROLIEiJ_G0021912	Thumpd2	95	65.010	ENSCHIG00000013921	THUMPD2	99	65.010	Capra_hircus
MGP_CAROLIEiJ_G0021912	Thumpd2	87	66.810	ENSTSYG00000010555	THUMPD2	99	66.341	Carlito_syrichta
MGP_CAROLIEiJ_G0021912	Thumpd2	95	64.706	ENSCPOG00000003368	THUMPD2	100	64.706	Cavia_porcellus
MGP_CAROLIEiJ_G0021912	Thumpd2	95	68.191	ENSCCAG00000034405	THUMPD2	100	68.191	Cebus_capucinus
MGP_CAROLIEiJ_G0021912	Thumpd2	95	68.056	ENSCATG00000012396	THUMPD2	100	68.056	Cercocebus_atys
MGP_CAROLIEiJ_G0021912	Thumpd2	95	65.476	ENSCLAG00000003029	THUMPD2	99	65.476	Chinchilla_lanigera
MGP_CAROLIEiJ_G0021912	Thumpd2	77	66.910	ENSCSAG00000012431	THUMPD2	100	66.910	Chlorocebus_sabaeus
MGP_CAROLIEiJ_G0021912	Thumpd2	67	61.690	ENSCHOG00000000360	THUMPD2	100	61.690	Choloepus_hoffmanni
MGP_CAROLIEiJ_G0021912	Thumpd2	95	52.827	ENSCPBG00000018272	THUMPD2	97	52.827	Chrysemys_picta_bellii
MGP_CAROLIEiJ_G0021912	Thumpd2	95	68.191	ENSCANG00000032596	THUMPD2	100	68.191	Colobus_angolensis_palliatus
MGP_CAROLIEiJ_G0021912	Thumpd2	100	79.245	ENSCGRG00001009939	Thumpd2	100	79.245	Cricetulus_griseus_chok1gshd
MGP_CAROLIEiJ_G0021912	Thumpd2	89	78.298	ENSCGRG00000006284	Thumpd2	100	78.298	Cricetulus_griseus_crigri
MGP_CAROLIEiJ_G0021912	Thumpd2	91	34.702	ENSDARG00000093070	thumpd2	98	36.345	Danio_rerio
MGP_CAROLIEiJ_G0021912	Thumpd2	93	65.657	ENSDNOG00000019834	THUMPD2	98	65.657	Dasypus_novemcinctus
MGP_CAROLIEiJ_G0021912	Thumpd2	87	55.460	ENSETEG00000001300	THUMPD2	99	55.460	Echinops_telfairi
MGP_CAROLIEiJ_G0021912	Thumpd2	52	41.812	ENSEBUG00000010906	THUMPD2	85	41.812	Eptatretus_burgeri
MGP_CAROLIEiJ_G0021912	Thumpd2	98	65.769	ENSEASG00005005106	THUMPD2	99	67.767	Equus_asinus_asinus
MGP_CAROLIEiJ_G0021912	Thumpd2	95	66.469	ENSECAG00000010799	THUMPD2	97	68.110	Equus_caballus
MGP_CAROLIEiJ_G0021912	Thumpd2	87	53.261	ENSEEUG00000000105	THUMPD2	100	53.261	Erinaceus_europaeus
MGP_CAROLIEiJ_G0021912	Thumpd2	91	37.275	ENSELUG00000003735	thumpd2	92	38.277	Esox_lucius
MGP_CAROLIEiJ_G0021912	Thumpd2	95	67.396	ENSFCAG00000006809	THUMPD2	100	67.857	Felis_catus
MGP_CAROLIEiJ_G0021912	Thumpd2	89	46.862	ENSFALG00000008655	THUMPD2	91	47.699	Ficedula_albicollis
MGP_CAROLIEiJ_G0021912	Thumpd2	91	37.143	ENSFHEG00000011402	thumpd2	97	37.143	Fundulus_heteroclitus
MGP_CAROLIEiJ_G0021912	Thumpd2	54	37.458	ENSGMOG00000002236	-	100	36.177	Gadus_morhua
MGP_CAROLIEiJ_G0021912	Thumpd2	78	49.169	ENSGALG00000009119	THUMPD2	99	49.169	Gallus_gallus
MGP_CAROLIEiJ_G0021912	Thumpd2	74	39.401	ENSGAFG00000012683	thumpd2	99	35.977	Gambusia_affinis
MGP_CAROLIEiJ_G0021912	Thumpd2	72	46.684	ENSGAGG00000001325	THUMPD2	98	46.684	Gopherus_agassizii
MGP_CAROLIEiJ_G0021912	Thumpd2	95	68.651	ENSGGOG00000001608	THUMPD2	100	68.651	Gorilla_gorilla
MGP_CAROLIEiJ_G0021912	Thumpd2	61	42.012	ENSHBUG00000011780	-	65	42.012	Haplochromis_burtoni
MGP_CAROLIEiJ_G0021912	Thumpd2	95	66.998	ENSHGLG00000019145	THUMPD2	99	66.998	Heterocephalus_glaber_female
MGP_CAROLIEiJ_G0021912	Thumpd2	75	41.748	ENSIPUG00000015283	thumpd2	91	41.748	Ictalurus_punctatus
MGP_CAROLIEiJ_G0021912	Thumpd2	95	69.703	ENSSTOG00000027472	THUMPD2	100	69.703	Ictidomys_tridecemlineatus
MGP_CAROLIEiJ_G0021912	Thumpd2	86	66.231	ENSJJAG00000020374	Thumpd2	97	66.231	Jaculus_jaculus
MGP_CAROLIEiJ_G0021912	Thumpd2	69	50.718	ENSLBEG00000007585	THUMPD2	84	40.184	Labrus_bergylta
MGP_CAROLIEiJ_G0021912	Thumpd2	91	39.250	ENSLOCG00000015747	THUMPD2	97	43.069	Lepisosteus_oculatus
MGP_CAROLIEiJ_G0021912	Thumpd2	56	66.102	ENSLAFG00000005383	-	97	66.102	Loxodonta_africana
MGP_CAROLIEiJ_G0021912	Thumpd2	95	68.056	ENSMFAG00000031464	THUMPD2	100	68.056	Macaca_fascicularis
MGP_CAROLIEiJ_G0021912	Thumpd2	95	68.254	ENSMMUG00000011841	THUMPD2	100	68.254	Macaca_mulatta
MGP_CAROLIEiJ_G0021912	Thumpd2	95	68.056	ENSMNEG00000037438	THUMPD2	100	68.056	Macaca_nemestrina
MGP_CAROLIEiJ_G0021912	Thumpd2	87	67.532	ENSMLEG00000031490	THUMPD2	100	67.532	Mandrillus_leucophaeus
MGP_CAROLIEiJ_G0021912	Thumpd2	75	37.346	ENSMAMG00000022090	thumpd2	81	37.346	Mastacembelus_armatus
MGP_CAROLIEiJ_G0021912	Thumpd2	85	41.292	ENSMZEG00005027354	-	73	41.292	Maylandia_zebra
MGP_CAROLIEiJ_G0021912	Thumpd2	89	50.417	ENSMGAG00000007605	THUMPD2	99	50.417	Meleagris_gallopavo
MGP_CAROLIEiJ_G0021912	Thumpd2	99	76.560	ENSMAUG00000012866	Thumpd2	99	76.560	Mesocricetus_auratus
MGP_CAROLIEiJ_G0021912	Thumpd2	92	68.916	ENSMICG00000008042	THUMPD2	100	67.659	Microcebus_murinus
MGP_CAROLIEiJ_G0021912	Thumpd2	99	76.749	ENSMOCG00000018094	Thumpd2	99	76.749	Microtus_ochrogaster
MGP_CAROLIEiJ_G0021912	Thumpd2	68	44.928	ENSMMOG00000007356	thumpd2	89	44.928	Mola_mola
MGP_CAROLIEiJ_G0021912	Thumpd2	87	56.438	ENSMODG00000009129	THUMPD2	100	56.652	Monodelphis_domestica
MGP_CAROLIEiJ_G0021912	Thumpd2	70	37.795	ENSMALG00000020471	thumpd2	97	38.039	Monopterus_albus
MGP_CAROLIEiJ_G0021912	Thumpd2	100	94.886	ENSMUSG00000024246	Thumpd2	100	94.886	Mus_musculus
MGP_CAROLIEiJ_G0021912	Thumpd2	100	91.098	MGP_PahariEiJ_G0020902	Thumpd2	100	91.098	Mus_pahari
MGP_CAROLIEiJ_G0021912	Thumpd2	100	95.644	MGP_SPRETEiJ_G0022828	Thumpd2	100	95.644	Mus_spretus
MGP_CAROLIEiJ_G0021912	Thumpd2	95	67.063	ENSMPUG00000010563	THUMPD2	99	67.063	Mustela_putorius_furo
MGP_CAROLIEiJ_G0021912	Thumpd2	89	66.596	ENSMLUG00000009688	THUMPD2	100	66.596	Myotis_lucifugus
MGP_CAROLIEiJ_G0021912	Thumpd2	96	73.425	ENSNGAG00000016396	Thumpd2	99	73.425	Nannospalax_galili
MGP_CAROLIEiJ_G0021912	Thumpd2	95	68.056	ENSNLEG00000016562	THUMPD2	100	68.056	Nomascus_leucogenys
MGP_CAROLIEiJ_G0021912	Thumpd2	89	53.291	ENSMEUG00000014815	THUMPD2	99	53.291	Notamacropus_eugenii
MGP_CAROLIEiJ_G0021912	Thumpd2	87	56.182	ENSOPRG00000013478	THUMPD2	99	56.182	Ochotona_princeps
MGP_CAROLIEiJ_G0021912	Thumpd2	76	39.151	ENSONIG00000001165	thumpd2	95	40.094	Oreochromis_niloticus
MGP_CAROLIEiJ_G0021912	Thumpd2	68	55.923	ENSOANG00000004028	-	97	55.923	Ornithorhynchus_anatinus
MGP_CAROLIEiJ_G0021912	Thumpd2	95	65.089	ENSOCUG00000003257	THUMPD2	100	68.828	Oryctolagus_cuniculus
MGP_CAROLIEiJ_G0021912	Thumpd2	93	36.542	ENSORLG00000002138	thumpd2	99	36.542	Oryzias_latipes
MGP_CAROLIEiJ_G0021912	Thumpd2	74	37.164	ENSORLG00020018792	thumpd2	94	37.164	Oryzias_latipes_hni
MGP_CAROLIEiJ_G0021912	Thumpd2	91	36.290	ENSORLG00015005237	thumpd2	97	36.768	Oryzias_latipes_hsok
MGP_CAROLIEiJ_G0021912	Thumpd2	75	35.294	ENSOMEG00000023563	thumpd2	97	33.143	Oryzias_melastigma
MGP_CAROLIEiJ_G0021912	Thumpd2	87	65.066	ENSOGAG00000010890	THUMPD2	99	65.066	Otolemur_garnettii
MGP_CAROLIEiJ_G0021912	Thumpd2	95	60.870	ENSOARG00000007841	THUMPD2	99	60.870	Ovis_aries
MGP_CAROLIEiJ_G0021912	Thumpd2	92	69.325	ENSPPAG00000033850	THUMPD2	99	69.325	Pan_paniscus
MGP_CAROLIEiJ_G0021912	Thumpd2	95	66.998	ENSPPRG00000003874	THUMPD2	100	67.460	Panthera_pardus
MGP_CAROLIEiJ_G0021912	Thumpd2	87	65.944	ENSPTIG00000004118	THUMPD2	96	66.450	Panthera_tigris_altaica
MGP_CAROLIEiJ_G0021912	Thumpd2	95	69.048	ENSPTRG00000011860	THUMPD2	100	69.048	Pan_troglodytes
MGP_CAROLIEiJ_G0021912	Thumpd2	95	67.659	ENSPANG00000004807	THUMPD2	100	67.659	Papio_anubis
MGP_CAROLIEiJ_G0021912	Thumpd2	91	37.882	ENSPKIG00000022207	THUMPD2	89	37.988	Paramormyrops_kingsleyae
MGP_CAROLIEiJ_G0021912	Thumpd2	87	52.239	ENSPSIG00000003159	THUMPD2	99	52.239	Pelodiscus_sinensis
MGP_CAROLIEiJ_G0021912	Thumpd2	100	77.401	ENSPEMG00000009015	Thumpd2	100	77.401	Peromyscus_maniculatus_bairdii
MGP_CAROLIEiJ_G0021912	Thumpd2	72	39.098	ENSPMAG00000006922	thumpd2	99	39.098	Petromyzon_marinus
MGP_CAROLIEiJ_G0021912	Thumpd2	94	53.600	ENSPCIG00000022621	THUMPD2	96	53.600	Phascolarctos_cinereus
MGP_CAROLIEiJ_G0021912	Thumpd2	91	36.811	ENSPFOG00000006461	thumpd2	96	37.008	Poecilia_formosa
MGP_CAROLIEiJ_G0021912	Thumpd2	91	33.400	ENSPLAG00000010700	THUMPD2	97	33.600	Poecilia_latipinna
MGP_CAROLIEiJ_G0021912	Thumpd2	68	47.826	ENSPMEG00000009573	-	93	37.002	Poecilia_mexicana
MGP_CAROLIEiJ_G0021912	Thumpd2	68	47.826	ENSPREG00000001603	THUMPD2	86	47.826	Poecilia_reticulata
MGP_CAROLIEiJ_G0021912	Thumpd2	89	67.579	ENSPPYG00000012470	THUMPD2	100	67.579	Pongo_abelii
MGP_CAROLIEiJ_G0021912	Thumpd2	87	55.195	ENSPCAG00000007326	THUMPD2	99	55.195	Procavia_capensis
MGP_CAROLIEiJ_G0021912	Thumpd2	95	56.548	ENSPCOG00000028456	-	100	56.548	Propithecus_coquereli
MGP_CAROLIEiJ_G0021912	Thumpd2	92	69.939	ENSPCOG00000000396	-	100	68.911	Propithecus_coquereli
MGP_CAROLIEiJ_G0021912	Thumpd2	89	66.385	ENSPVAG00000008101	THUMPD2	100	66.385	Pteropus_vampyrus
MGP_CAROLIEiJ_G0021912	Thumpd2	93	33.202	ENSPNYG00000009804	THUMPD2	97	33.529	Pundamilia_nyererei
MGP_CAROLIEiJ_G0021912	Thumpd2	92	36.000	ENSPNAG00000023224	thumpd2	98	36.000	Pygocentrus_nattereri
MGP_CAROLIEiJ_G0021912	Thumpd2	100	82.987	ENSRNOG00000008291	Thumpd2	96	82.987	Rattus_norvegicus
MGP_CAROLIEiJ_G0021912	Thumpd2	95	61.431	ENSRBIG00000034978	THUMPD2	100	61.431	Rhinopithecus_bieti
MGP_CAROLIEiJ_G0021912	Thumpd2	89	67.653	ENSRROG00000031707	THUMPD2	100	67.653	Rhinopithecus_roxellana
MGP_CAROLIEiJ_G0021912	Thumpd2	95	68.849	ENSSBOG00000015419	THUMPD2	100	68.849	Saimiri_boliviensis_boliviensis
MGP_CAROLIEiJ_G0021912	Thumpd2	89	57.143	ENSSHAG00000010785	THUMPD2	99	57.143	Sarcophilus_harrisii
MGP_CAROLIEiJ_G0021912	Thumpd2	63	58.209	ENSSFOG00015006959	THUMPD2	88	58.209	Scleropages_formosus
MGP_CAROLIEiJ_G0021912	Thumpd2	82	38.418	ENSSDUG00000019898	THUMPD2	75	38.418	Seriola_dumerili
MGP_CAROLIEiJ_G0021912	Thumpd2	82	40.058	ENSSLDG00000016788	-	75	40.058	Seriola_lalandi_dorsalis
MGP_CAROLIEiJ_G0021912	Thumpd2	65	31.250	ENSSARG00000002239	THUMPD3	70	31.250	Sorex_araneus
MGP_CAROLIEiJ_G0021912	Thumpd2	77	50.839	ENSSPUG00000006316	THUMPD2	97	50.839	Sphenodon_punctatus
MGP_CAROLIEiJ_G0021912	Thumpd2	95	65.278	ENSSSCG00000008470	THUMPD2	99	64.484	Sus_scrofa
MGP_CAROLIEiJ_G0021912	Thumpd2	73	52.174	ENSTGUG00000012782	THUMPD2	100	52.174	Taeniopygia_guttata
MGP_CAROLIEiJ_G0021912	Thumpd2	91	35.039	ENSTRUG00000022712	THUMPD2	97	35.039	Takifugu_rubripes
MGP_CAROLIEiJ_G0021912	Thumpd2	51	35.165	ENSTNIG00000009817	-	100	35.165	Tetraodon_nigroviridis
MGP_CAROLIEiJ_G0021912	Thumpd2	52	53.650	ENSTBEG00000008269	-	59	53.650	Tupaia_belangeri
MGP_CAROLIEiJ_G0021912	Thumpd2	89	67.585	ENSTTRG00000005603	THUMPD2	99	67.585	Tursiops_truncatus
MGP_CAROLIEiJ_G0021912	Thumpd2	95	67.391	ENSUAMG00000011048	THUMPD2	97	67.871	Ursus_americanus
MGP_CAROLIEiJ_G0021912	Thumpd2	92	62.372	ENSUMAG00000013316	THUMPD2	96	64.363	Ursus_maritimus
MGP_CAROLIEiJ_G0021912	Thumpd2	77	66.418	ENSVPAG00000007570	THUMPD2	86	66.418	Vicugna_pacos
MGP_CAROLIEiJ_G0021912	Thumpd2	89	67.089	ENSVVUG00000018628	THUMPD2	100	67.089	Vulpes_vulpes
MGP_CAROLIEiJ_G0021912	Thumpd2	91	43.089	ENSXETG00000018494	thumpd2	99	43.089	Xenopus_tropicalis
MGP_CAROLIEiJ_G0021912	Thumpd2	71	43.403	ENSXCOG00000013456	-	90	43.403	Xiphophorus_couchianus
MGP_CAROLIEiJ_G0021912	Thumpd2	91	36.802	ENSXMAG00000017249	thumpd2	96	36.802	Xiphophorus_maculatus