EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_CAROLIEiJ_G0021927 (Gene tree)
Gene ID: 110312528
Gene Symbol: Lrpprc
Alias: 3110001K13Rik|Lrp130
Full Name: leucine rich pentatricopeptide repeat containing
Gene Type: protein_coding
Species: Mus_caroli
Status: putative
Strand: Minus strand
Length: 83964 bases
Position: chr17:80298685-80382648
Accession: 110312528
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CAROLIEiJ_P0045755	PPR	PF01535.20	8.9e-25	1	3
MGP_CAROLIEiJ_P0045755	PPR	PF01535.20	8.9e-25	2	3
MGP_CAROLIEiJ_P0045755	PPR	PF01535.20	8.9e-25	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CAROLIEiJ_T0045755	-	4376	XM_021186193	MGP_CAROLIEiJ_P0045755	1392 (aa)	XP_021041852	UPI000A318A43
MGP_CAROLIEiJ_T0045757	-	565	-	MGP_CAROLIEiJ_P0045757	141 (aa)	-	-
MGP_CAROLIEiJ_T0045756	-	673	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0045759	-	2720	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0045758	-	540	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0045760	-	4013	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0045761	-	963	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_CAROLIEiJ_G0021927's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CAROLIEiJ_G0021927's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_CAROLIEiJ_G0021927	Lrpprc	100	75.036	ENSG00000138095	LRPPRC	100	75.036	Homo_sapiens
MGP_CAROLIEiJ_G0021927	Lrpprc	94	57.947	ENSAPLG00000008902	LRPPRC	99	57.502	Anas_platyrhynchos
MGP_CAROLIEiJ_G0021927	Lrpprc	99	76.829	ENSBTAG00000016368	LRPPRC	99	76.741	Bos_taurus
MGP_CAROLIEiJ_G0021927	Lrpprc	99	76.023	ENSCAFG00000002527	LRPPRC	99	75.951	Canis_familiaris
MGP_CAROLIEiJ_G0021927	Lrpprc	99	75.233	ENSCAFG00020025995	LRPPRC	99	75.162	Canis_lupus_dingo
MGP_CAROLIEiJ_G0021927	Lrpprc	96	77.885	ENSTSYG00000013197	LRPPRC	96	77.885	Carlito_syrichta
MGP_CAROLIEiJ_G0021927	Lrpprc	97	65.779	ENSCPBG00000005446	LRPPRC	99	65.779	Chrysemys_picta_bellii
MGP_CAROLIEiJ_G0021927	Lrpprc	67	32.885	FBgn0284256	bsf	54	40.099	Drosophila_melanogaster
MGP_CAROLIEiJ_G0021927	Lrpprc	99	78.479	ENSEASG00005003715	LRPPRC	99	78.336	Equus_asinus_asinus
MGP_CAROLIEiJ_G0021927	Lrpprc	99	77.545	ENSECAG00000023814	LRPPRC	96	77.401	Equus_caballus
MGP_CAROLIEiJ_G0021927	Lrpprc	96	55.696	ENSGALG00000009967	LRPPRC	99	55.011	Gallus_gallus
MGP_CAROLIEiJ_G0021927	Lrpprc	97	64.023	ENSGAGG00000020227	LRPPRC	99	63.105	Gopherus_agassizii
MGP_CAROLIEiJ_G0021927	Lrpprc	100	75.393	ENSMLEG00000043673	LRPPRC	100	75.322	Mandrillus_leucophaeus
MGP_CAROLIEiJ_G0021927	Lrpprc	96	56.059	ENSMGAG00000010201	LRPPRC	99	56.460	Meleagris_gallopavo
MGP_CAROLIEiJ_G0021927	Lrpprc	100	95.546	ENSMUSG00000024120	Lrpprc	100	95.546	Mus_musculus
MGP_CAROLIEiJ_G0021927	Lrpprc	100	93.463	MGP_PahariEiJ_G0020917	Lrpprc	100	93.463	Mus_pahari
MGP_CAROLIEiJ_G0021927	Lrpprc	100	95.402	MGP_SPRETEiJ_G0022843	Lrpprc	100	95.402	Mus_spretus
MGP_CAROLIEiJ_G0021927	Lrpprc	82	80.000	ENSMEUG00000004430	-	89	80.000	Notamacropus_eugenii
MGP_CAROLIEiJ_G0021927	Lrpprc	100	83.477	ENSPEMG00000022720	Lrpprc	100	83.261	Peromyscus_maniculatus_bairdii
MGP_CAROLIEiJ_G0021927	Lrpprc	100	66.122	ENSPCIG00000006872	LRPPRC	100	65.956	Phascolarctos_cinereus
MGP_CAROLIEiJ_G0021927	Lrpprc	99	76.112	ENSPCOG00000001309	LRPPRC	99	76.112	Propithecus_coquereli
MGP_CAROLIEiJ_G0021927	Lrpprc	89	60.064	ENSSPUG00000005188	LRPPRC	99	59.904	Sphenodon_punctatus
MGP_CAROLIEiJ_G0021927	Lrpprc	66	75.566	ENSTBEG00000011055	-	66	75.566	Tupaia_belangeri
MGP_CAROLIEiJ_G0021927	Lrpprc	100	76.631	ENSUAMG00000022940	LRPPRC	100	76.631	Ursus_americanus
MGP_CAROLIEiJ_G0021927	Lrpprc	100	76.631	ENSUMAG00000012801	LRPPRC	100	76.881	Ursus_maritimus
MGP_CAROLIEiJ_G0021927	Lrpprc	99	75.018	ENSVVUG00000002339	LRPPRC	99	74.803	Vulpes_vulpes