EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: MGP_CAROLIEiJ_G0021978 (Gene tree)
Gene ID: 110284922
Gene Symbol: Rab18
Alias: -
Full Name: RAB18%2C member RAS oncogene family
Gene Type: protein_coding
Species: Mus_caroli
Status: putative
Strand: Plus strand
Length: 27210 bases
Position: chr18:3405268-3432477
Accession: 110284922
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CAROLIEiJ_P0045989	MMR_HSR1	PF01926.23	2e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CAROLIEiJ_T0045989	-	2276	XM_021150921	MGP_CAROLIEiJ_P0045989	206 (aa)	XP_021006580	UPI0000004072

Gene Model

Click here to download MGP_CAROLIEiJ_G0021978's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CAROLIEiJ_G0021978's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CAROLIEiJ_G0021978	Rab18	97	39.423	MGP_CAROLIEiJ_G0033044	Rab33a	88	39.423
MGP_CAROLIEiJ_G0021978	Rab18	93	37.755	MGP_CAROLIEiJ_G0024976	Rab33b	85	37.755
MGP_CAROLIEiJ_G0021978	Rab18	78	45.062	MGP_CAROLIEiJ_G0017184	Rab5c	75	45.062
MGP_CAROLIEiJ_G0021978	Rab18	93	40.816	MGP_CAROLIEiJ_G0021741	Rab5a	85	46.452
MGP_CAROLIEiJ_G0021978	Rab18	78	47.531	MGP_CAROLIEiJ_G0032346	Rab11a	93	48.252
MGP_CAROLIEiJ_G0021978	Rab18	93	44.845	MGP_CAROLIEiJ_G0022536	Rab1b	96	44.845
MGP_CAROLIEiJ_G0021978	Rab18	89	47.872	MGP_CAROLIEiJ_G0019238	Rab2b	86	47.872
MGP_CAROLIEiJ_G0021978	Rab18	81	33.133	MGP_CAROLIEiJ_G0025445	Nras	99	31.544
MGP_CAROLIEiJ_G0021978	Rab18	84	48.851	MGP_CAROLIEiJ_G0027632	Rab35	95	46.632
MGP_CAROLIEiJ_G0021978	Rab18	82	44.706	MGP_CAROLIEiJ_G0017873	Rab15	79	44.706
MGP_CAROLIEiJ_G0021978	Rab18	88	40.541	MGP_CAROLIEiJ_G0021830	Rab31	92	40.541
MGP_CAROLIEiJ_G0021978	Rab18	79	49.697	MGP_CAROLIEiJ_G0021839	Rab12	56	49.697
MGP_CAROLIEiJ_G0021978	Rab18	78	45.062	MGP_CAROLIEiJ_G0017386	Rab37	75	45.062
MGP_CAROLIEiJ_G0021978	Rab18	96	33.495	MGP_CAROLIEiJ_G0020176	Rabl2	88	33.495
MGP_CAROLIEiJ_G0021978	Rab18	95	36.181	MGP_CAROLIEiJ_G0033427	Rab9b	96	36.181
MGP_CAROLIEiJ_G0021978	Rab18	96	31.313	MGP_CAROLIEiJ_G0030681	Hras	95	31.414
MGP_CAROLIEiJ_G0021978	Rab18	87	50.000	MGP_CAROLIEiJ_G0025796	Rab2a	97	47.368
MGP_CAROLIEiJ_G0021978	Rab18	93	45.361	MGP_CAROLIEiJ_G0016115	Rab1a	94	45.361
MGP_CAROLIEiJ_G0021978	Rab18	76	32.716	MGP_CAROLIEiJ_G0027024	Rheb	85	32.716
MGP_CAROLIEiJ_G0021978	Rab18	79	49.390	MGP_CAROLIEiJ_G0023477	-	89	48.529
MGP_CAROLIEiJ_G0021978	Rab18	79	34.731	MGP_CAROLIEiJ_G0017579	Dnajc27	61	34.731
MGP_CAROLIEiJ_G0021978	Rab18	81	44.311	MGP_CAROLIEiJ_G0025227	Rab13	82	44.311
MGP_CAROLIEiJ_G0021978	Rab18	94	38.119	MGP_CAROLIEiJ_G0032585	Rab6b	95	38.119
MGP_CAROLIEiJ_G0021978	Rab18	95	39.796	MGP_CAROLIEiJ_G0024752	Rab22a	99	39.796
MGP_CAROLIEiJ_G0021978	Rab18	82	44.118	MGP_CAROLIEiJ_G0025171	Rab25	79	44.118
MGP_CAROLIEiJ_G0021978	Rab18	81	34.524	MGP_CAROLIEiJ_G0032562	Mras	95	33.005
MGP_CAROLIEiJ_G0021978	Rab18	93	36.923	MGP_CAROLIEiJ_G0033573	Rab9	97	36.923
MGP_CAROLIEiJ_G0021978	Rab18	85	44.693	MGP_CAROLIEiJ_G0021415	Rab11b	95	47.887
MGP_CAROLIEiJ_G0021978	Rab18	83	35.465	MGP_CAROLIEiJ_G0014015	Rab23	72	35.465
MGP_CAROLIEiJ_G0021978	Rab18	76	49.367	MGP_CAROLIEiJ_G0029992	Rab30	77	49.367
MGP_CAROLIEiJ_G0021978	Rab18	56	38.793	MGP_CAROLIEiJ_G0015435	Rab36	60	33.750
MGP_CAROLIEiJ_G0021978	Rab18	81	33.133	MGP_CAROLIEiJ_G0029047	Kras	87	33.537
MGP_CAROLIEiJ_G0021978	Rab18	94	36.634	MGP_CAROLIEiJ_G0030051	Rab6a	95	36.634

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_CAROLIEiJ_G0021978	Rab18	100	99.029	ENSG00000099246	RAB18	100	99.029	Homo_sapiens
MGP_CAROLIEiJ_G0021978	Rab18	99	84.878	ENSAPOG00000019881	rab18b	99	84.878	Acanthochromis_polyacanthus
MGP_CAROLIEiJ_G0021978	Rab18	100	85.593	ENSAMEG00000015990	RAB18	100	85.593	Ailuropoda_melanoleuca
MGP_CAROLIEiJ_G0021978	Rab18	99	86.829	ENSACIG00000008102	rab18b	99	86.829	Amphilophus_citrinellus
MGP_CAROLIEiJ_G0021978	Rab18	99	84.878	ENSAOCG00000013479	rab18b	99	84.878	Amphiprion_ocellaris
MGP_CAROLIEiJ_G0021978	Rab18	99	84.390	ENSAPEG00000022923	rab18b	99	84.390	Amphiprion_percula
MGP_CAROLIEiJ_G0021978	Rab18	99	83.902	ENSATEG00000002952	rab18b	99	83.902	Anabas_testudineus
MGP_CAROLIEiJ_G0021978	Rab18	100	99.029	ENSANAG00000035856	RAB18	100	99.029	Aotus_nancymaae
MGP_CAROLIEiJ_G0021978	Rab18	99	85.854	ENSACLG00000015289	rab18b	99	85.854	Astatotilapia_calliptera
MGP_CAROLIEiJ_G0021978	Rab18	100	86.893	ENSAMXG00000042073	rab18b	100	86.893	Astyanax_mexicanus
MGP_CAROLIEiJ_G0021978	Rab18	100	98.544	ENSBTAG00000009871	RAB18	88	98.544	Bos_taurus
MGP_CAROLIEiJ_G0021978	Rab18	100	96.117	ENSBTAG00000050873	-	100	96.117	Bos_taurus
MGP_CAROLIEiJ_G0021978	Rab18	100	99.029	ENSCJAG00000045749	RAB18	100	99.029	Callithrix_jacchus
MGP_CAROLIEiJ_G0021978	Rab18	100	98.058	ENSCAFG00020003253	RAB18	100	98.058	Canis_lupus_dingo
MGP_CAROLIEiJ_G0021978	Rab18	100	98.544	ENSCHIG00000008749	RAB18	100	98.544	Capra_hircus
MGP_CAROLIEiJ_G0021978	Rab18	100	98.544	ENSTSYG00000013092	RAB18	100	98.544	Carlito_syrichta
MGP_CAROLIEiJ_G0021978	Rab18	100	99.029	ENSCPOG00000032827	RAB18	100	99.029	Cavia_porcellus
MGP_CAROLIEiJ_G0021978	Rab18	100	99.029	ENSCCAG00000006762	RAB18	100	99.029	Cebus_capucinus
MGP_CAROLIEiJ_G0021978	Rab18	100	99.029	ENSCATG00000009672	RAB18	100	99.029	Cercocebus_atys
MGP_CAROLIEiJ_G0021978	Rab18	100	99.029	ENSCSAG00000011749	RAB18	100	99.029	Chlorocebus_sabaeus
MGP_CAROLIEiJ_G0021978	Rab18	100	99.029	ENSCANG00000035397	RAB18	100	99.029	Colobus_angolensis_palliatus
MGP_CAROLIEiJ_G0021978	Rab18	100	99.515	ENSCGRG00001017519	Rab18	100	99.515	Cricetulus_griseus_chok1gshd
MGP_CAROLIEiJ_G0021978	Rab18	100	99.515	ENSCGRG00000017201	Rab18	100	99.515	Cricetulus_griseus_crigri
MGP_CAROLIEiJ_G0021978	Rab18	95	85.128	ENSCSEG00000016803	rab18b	99	85.128	Cynoglossus_semilaevis
MGP_CAROLIEiJ_G0021978	Rab18	100	88.350	ENSDARG00000098344	rab18b	100	88.350	Danio_rerio
MGP_CAROLIEiJ_G0021978	Rab18	62	88.372	ENSDNOG00000038845	-	85	88.372	Dasypus_novemcinctus
MGP_CAROLIEiJ_G0021978	Rab18	100	99.029	ENSDNOG00000047713	RAB18	100	99.029	Dasypus_novemcinctus
MGP_CAROLIEiJ_G0021978	Rab18	84	91.379	ENSDORG00000029360	-	83	91.379	Dipodomys_ordii
MGP_CAROLIEiJ_G0021978	Rab18	100	99.029	ENSDORG00000028596	-	100	99.029	Dipodomys_ordii
MGP_CAROLIEiJ_G0021978	Rab18	100	99.029	ENSEASG00005007164	RAB18	100	99.029	Equus_asinus_asinus
MGP_CAROLIEiJ_G0021978	Rab18	100	99.029	ENSECAG00000017521	RAB18	88	99.029	Equus_caballus
MGP_CAROLIEiJ_G0021978	Rab18	99	86.893	ENSELUG00000016450	rab18b	99	86.893	Esox_lucius
MGP_CAROLIEiJ_G0021978	Rab18	100	98.058	ENSFCAG00000027161	RAB18	100	98.058	Felis_catus
MGP_CAROLIEiJ_G0021978	Rab18	100	95.652	ENSFALG00000007160	RAB18	100	95.652	Ficedula_albicollis
MGP_CAROLIEiJ_G0021978	Rab18	99	84.878	ENSFHEG00000020035	rab18b	99	84.878	Fundulus_heteroclitus
MGP_CAROLIEiJ_G0021978	Rab18	99	79.512	ENSGMOG00000016608	rab18b	99	79.512	Gadus_morhua
MGP_CAROLIEiJ_G0021978	Rab18	100	96.602	ENSGALG00000007435	RAB18	100	96.602	Gallus_gallus
MGP_CAROLIEiJ_G0021978	Rab18	99	84.878	ENSGAFG00000008560	rab18b	99	84.878	Gambusia_affinis
MGP_CAROLIEiJ_G0021978	Rab18	99	83.415	ENSGACG00000016395	rab18b	99	83.415	Gasterosteus_aculeatus
MGP_CAROLIEiJ_G0021978	Rab18	100	99.029	ENSGGOG00000008086	RAB18	100	99.029	Gorilla_gorilla
MGP_CAROLIEiJ_G0021978	Rab18	99	85.854	ENSHBUG00000003696	rab18b	99	85.854	Haplochromis_burtoni
MGP_CAROLIEiJ_G0021978	Rab18	99	80.976	ENSHGLG00000007301	-	95	80.976	Heterocephalus_glaber_female
MGP_CAROLIEiJ_G0021978	Rab18	100	97.573	ENSHGLG00000004365	RAB18	100	97.573	Heterocephalus_glaber_female
MGP_CAROLIEiJ_G0021978	Rab18	100	97.573	ENSHGLG00100013089	-	100	97.573	Heterocephalus_glaber_male
MGP_CAROLIEiJ_G0021978	Rab18	99	80.976	ENSHGLG00100009117	-	95	80.976	Heterocephalus_glaber_male
MGP_CAROLIEiJ_G0021978	Rab18	99	83.902	ENSHCOG00000002217	rab18b	99	83.902	Hippocampus_comes
MGP_CAROLIEiJ_G0021978	Rab18	100	84.466	ENSIPUG00000010859	rab18b	100	84.466	Ictalurus_punctatus
MGP_CAROLIEiJ_G0021978	Rab18	100	99.029	ENSSTOG00000014560	-	100	99.029	Ictidomys_tridecemlineatus
MGP_CAROLIEiJ_G0021978	Rab18	99	85.366	ENSKMAG00000007364	rab18b	99	85.366	Kryptolebias_marmoratus
MGP_CAROLIEiJ_G0021978	Rab18	99	85.854	ENSLBEG00000019428	rab18b	99	85.854	Labrus_bergylta
MGP_CAROLIEiJ_G0021978	Rab18	100	79.612	ENSLACG00000011256	rab18b	100	79.612	Latimeria_chalumnae
MGP_CAROLIEiJ_G0021978	Rab18	100	98.544	ENSLAFG00000015582	RAB18	100	98.544	Loxodonta_africana
MGP_CAROLIEiJ_G0021978	Rab18	100	99.029	ENSMFAG00000006430	RAB18	100	99.029	Macaca_fascicularis
MGP_CAROLIEiJ_G0021978	Rab18	100	97.087	ENSMMUG00000046971	RAB18	74	97.087	Macaca_mulatta
MGP_CAROLIEiJ_G0021978	Rab18	100	99.029	ENSMNEG00000038180	RAB18	100	99.029	Macaca_nemestrina
MGP_CAROLIEiJ_G0021978	Rab18	100	99.029	ENSMLEG00000033595	RAB18	100	99.029	Mandrillus_leucophaeus
MGP_CAROLIEiJ_G0021978	Rab18	100	82.524	ENSMAMG00000018445	rab18b	100	82.524	Mastacembelus_armatus
MGP_CAROLIEiJ_G0021978	Rab18	99	85.854	ENSMZEG00005008244	rab18b	99	85.854	Maylandia_zebra
MGP_CAROLIEiJ_G0021978	Rab18	97	88.442	ENSMAUG00000020698	-	96	88.442	Mesocricetus_auratus
MGP_CAROLIEiJ_G0021978	Rab18	100	99.029	ENSMICG00000017280	RAB18	100	99.029	Microcebus_murinus
MGP_CAROLIEiJ_G0021978	Rab18	100	99.515	ENSMOCG00000013044	Rab18	100	99.515	Microtus_ochrogaster
MGP_CAROLIEiJ_G0021978	Rab18	99	71.759	ENSMMOG00000017849	rab18b	99	71.759	Mola_mola
MGP_CAROLIEiJ_G0021978	Rab18	100	84.466	ENSMODG00000024936	-	100	84.466	Monodelphis_domestica
MGP_CAROLIEiJ_G0021978	Rab18	100	97.087	ENSMODG00000008253	RAB18	100	97.087	Monodelphis_domestica
MGP_CAROLIEiJ_G0021978	Rab18	99	84.878	ENSMALG00000005069	rab18b	99	84.878	Monopterus_albus
MGP_CAROLIEiJ_G0021978	Rab18	100	100.000	ENSMUSG00000073639	Rab18	100	100.000	Mus_musculus
MGP_CAROLIEiJ_G0021978	Rab18	100	100.000	MGP_PahariEiJ_G0018716	Rab18	100	100.000	Mus_pahari
MGP_CAROLIEiJ_G0021978	Rab18	100	100.000	MGP_SPRETEiJ_G0022894	Rab18	100	100.000	Mus_spretus
MGP_CAROLIEiJ_G0021978	Rab18	100	98.058	ENSMPUG00000010592	RAB18	100	98.058	Mustela_putorius_furo
MGP_CAROLIEiJ_G0021978	Rab18	100	86.441	ENSMLUG00000027295	RAB18	100	86.441	Myotis_lucifugus
MGP_CAROLIEiJ_G0021978	Rab18	100	99.029	ENSNGAG00000001465	Rab18	100	99.029	Nannospalax_galili
MGP_CAROLIEiJ_G0021978	Rab18	99	85.366	ENSNBRG00000008137	rab18b	99	85.366	Neolamprologus_brichardi
MGP_CAROLIEiJ_G0021978	Rab18	100	99.029	ENSNLEG00000016970	RAB18	100	99.029	Nomascus_leucogenys
MGP_CAROLIEiJ_G0021978	Rab18	100	99.029	ENSODEG00000004150	-	100	99.029	Octodon_degus
MGP_CAROLIEiJ_G0021978	Rab18	99	85.366	ENSONIG00000018673	rab18b	99	85.366	Oreochromis_niloticus
MGP_CAROLIEiJ_G0021978	Rab18	100	96.602	ENSOANG00000021391	RAB18	100	96.602	Ornithorhynchus_anatinus
MGP_CAROLIEiJ_G0021978	Rab18	100	97.573	ENSOCUG00000022307	RAB18	100	97.573	Oryctolagus_cuniculus
MGP_CAROLIEiJ_G0021978	Rab18	99	83.902	ENSORLG00000009609	rab18b	99	83.902	Oryzias_latipes
MGP_CAROLIEiJ_G0021978	Rab18	99	83.902	ENSORLG00020011590	rab18b	99	83.902	Oryzias_latipes_hni
MGP_CAROLIEiJ_G0021978	Rab18	99	83.902	ENSORLG00015007182	rab18b	99	83.902	Oryzias_latipes_hsok
MGP_CAROLIEiJ_G0021978	Rab18	99	83.902	ENSOMEG00000007546	rab18b	99	83.902	Oryzias_melastigma
MGP_CAROLIEiJ_G0021978	Rab18	100	98.544	ENSOGAG00000028015	RAB18	100	98.544	Otolemur_garnettii
MGP_CAROLIEiJ_G0021978	Rab18	100	98.544	ENSOARG00000016208	RAB18	100	98.544	Ovis_aries
MGP_CAROLIEiJ_G0021978	Rab18	100	99.029	ENSPPAG00000041625	RAB18	100	99.029	Pan_paniscus
MGP_CAROLIEiJ_G0021978	Rab18	100	98.058	ENSPPRG00000010314	RAB18	100	98.058	Panthera_pardus
MGP_CAROLIEiJ_G0021978	Rab18	100	98.058	ENSPTIG00000011667	RAB18	100	98.058	Panthera_tigris_altaica
MGP_CAROLIEiJ_G0021978	Rab18	100	99.029	ENSPTRG00000002384	RAB18	100	99.029	Pan_troglodytes
MGP_CAROLIEiJ_G0021978	Rab18	100	99.029	ENSPANG00000023005	RAB18	100	99.029	Papio_anubis
MGP_CAROLIEiJ_G0021978	Rab18	98	84.804	ENSPMAG00000005322	rab18b	98	84.804	Petromyzon_marinus
MGP_CAROLIEiJ_G0021978	Rab18	100	97.087	ENSPCIG00000028705	-	88	97.087	Phascolarctos_cinereus
MGP_CAROLIEiJ_G0021978	Rab18	99	85.366	ENSPFOG00000013491	rab18b	99	85.366	Poecilia_formosa
MGP_CAROLIEiJ_G0021978	Rab18	99	85.366	ENSPLAG00000019136	rab18b	99	85.366	Poecilia_latipinna
MGP_CAROLIEiJ_G0021978	Rab18	99	85.366	ENSPMEG00000008223	rab18b	99	85.366	Poecilia_mexicana
MGP_CAROLIEiJ_G0021978	Rab18	100	99.029	ENSPPYG00000002172	RAB18	100	99.029	Pongo_abelii
MGP_CAROLIEiJ_G0021978	Rab18	100	99.029	ENSPCOG00000018906	RAB18	100	99.029	Propithecus_coquereli
MGP_CAROLIEiJ_G0021978	Rab18	99	85.854	ENSPNYG00000001751	rab18b	99	85.854	Pundamilia_nyererei
MGP_CAROLIEiJ_G0021978	Rab18	100	86.893	ENSPNAG00000002404	rab18b	100	86.893	Pygocentrus_nattereri
MGP_CAROLIEiJ_G0021978	Rab18	100	99.029	ENSRNOG00000018972	Rab18	100	99.029	Rattus_norvegicus
MGP_CAROLIEiJ_G0021978	Rab18	100	98.544	ENSRBIG00000035948	RAB18	100	98.544	Rhinopithecus_bieti
MGP_CAROLIEiJ_G0021978	Rab18	100	99.029	ENSRROG00000040563	RAB18	100	99.029	Rhinopithecus_roxellana
MGP_CAROLIEiJ_G0021978	Rab18	100	97.573	ENSSHAG00000007613	RAB18	100	97.573	Sarcophilus_harrisii
MGP_CAROLIEiJ_G0021978	Rab18	99	83.415	ENSSMAG00000011814	rab18b	99	83.415	Scophthalmus_maximus
MGP_CAROLIEiJ_G0021978	Rab18	99	84.878	ENSSDUG00000005960	rab18b	99	84.878	Seriola_dumerili
MGP_CAROLIEiJ_G0021978	Rab18	99	84.878	ENSSLDG00000006014	rab18b	99	84.878	Seriola_lalandi_dorsalis
MGP_CAROLIEiJ_G0021978	Rab18	99	84.878	ENSSPAG00000020875	rab18b	99	84.878	Stegastes_partitus
MGP_CAROLIEiJ_G0021978	Rab18	100	98.544	ENSSSCG00000028655	RAB18	100	98.544	Sus_scrofa
MGP_CAROLIEiJ_G0021978	Rab18	100	84.615	ENSTGUG00000001105	-	100	84.615	Taeniopygia_guttata
MGP_CAROLIEiJ_G0021978	Rab18	99	83.575	ENSTRUG00000004283	rab18b	99	84.878	Takifugu_rubripes
MGP_CAROLIEiJ_G0021978	Rab18	99	82.439	ENSTNIG00000007882	rab18b	99	82.439	Tetraodon_nigroviridis
MGP_CAROLIEiJ_G0021978	Rab18	100	98.058	ENSVVUG00000001705	RAB18	100	98.058	Vulpes_vulpes
MGP_CAROLIEiJ_G0021978	Rab18	99	84.878	ENSXMAG00000006945	rab18b	99	85.366	Xiphophorus_maculatus