EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_CAROLIEiJ_G0021989 (Gene tree)
Gene ID: 110284475
Gene Symbol: Thoc1
Alias: 3110002N20Rik|NMP-84
Full Name: THO complex 1
Gene Type: protein_coding
Species: Mus_caroli
Status: putative
Strand: Plus strand
Length: 37366 bases
Position: chr18:6380304-6417669
Accession: 110284475
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CAROLIEiJ_P0046015	efThoc1	PF11957.8	5.6e-145	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CAROLIEiJ_T0046015	-	3334	-	MGP_CAROLIEiJ_P0046015	657 (aa)	XP_021005868	UPI000A319602

Gene Model

Click here to download MGP_CAROLIEiJ_G0021989's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CAROLIEiJ_G0021989's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_CAROLIEiJ_G0021989	Thoc1	100	96.043	ENSG00000079134	THOC1	99	97.872	Homo_sapiens
MGP_CAROLIEiJ_G0021989	Thoc1	100	96.651	ENSAMEG00000006645	THOC1	99	96.651	Ailuropoda_melanoleuca
MGP_CAROLIEiJ_G0021989	Thoc1	97	68.701	ENSACIG00000019392	thoc1	98	68.701	Amphilophus_citrinellus
MGP_CAROLIEiJ_G0021989	Thoc1	98	68.462	ENSAOCG00000008391	thoc1	99	68.462	Amphiprion_ocellaris
MGP_CAROLIEiJ_G0021989	Thoc1	98	71.779	ENSAPEG00000001093	thoc1	99	71.779	Amphiprion_percula
MGP_CAROLIEiJ_G0021989	Thoc1	98	71.582	ENSATEG00000004783	thoc1	99	71.582	Anabas_testudineus
MGP_CAROLIEiJ_G0021989	Thoc1	100	87.709	ENSAPLG00000016149	THOC1	99	87.709	Anas_platyrhynchos
MGP_CAROLIEiJ_G0021989	Thoc1	100	87.879	ENSACAG00000008307	THOC1	98	86.495	Anolis_carolinensis
MGP_CAROLIEiJ_G0021989	Thoc1	100	95.030	ENSANAG00000033200	THOC1	100	95.030	Aotus_nancymaae
MGP_CAROLIEiJ_G0021989	Thoc1	98	71.472	ENSACLG00000016836	thoc1	99	71.472	Astatotilapia_calliptera
MGP_CAROLIEiJ_G0021989	Thoc1	93	71.176	ENSAMXG00000014708	thoc1	97	71.176	Astyanax_mexicanus
MGP_CAROLIEiJ_G0021989	Thoc1	100	96.195	ENSBTAG00000019215	THOC1	100	96.195	Bos_taurus
MGP_CAROLIEiJ_G0021989	Thoc1	70	35.073	WBGene00020172	thoc-1	68	36.226	Caenorhabditis_elegans
MGP_CAROLIEiJ_G0021989	Thoc1	100	96.043	ENSCJAG00000020450	THOC1	100	96.043	Callithrix_jacchus
MGP_CAROLIEiJ_G0021989	Thoc1	100	96.651	ENSCAFG00000018324	THOC1	100	96.651	Canis_familiaris
MGP_CAROLIEiJ_G0021989	Thoc1	100	96.651	ENSCAFG00020017894	THOC1	100	96.651	Canis_lupus_dingo
MGP_CAROLIEiJ_G0021989	Thoc1	100	96.195	ENSCHIG00000015399	THOC1	100	96.195	Capra_hircus
MGP_CAROLIEiJ_G0021989	Thoc1	100	96.651	ENSTSYG00000010585	THOC1	99	96.651	Carlito_syrichta
MGP_CAROLIEiJ_G0021989	Thoc1	97	70.561	ENSCAPG00000016270	THOC1	98	70.561	Cavia_aperea
MGP_CAROLIEiJ_G0021989	Thoc1	100	94.673	ENSCPOG00000000959	THOC1	100	94.673	Cavia_porcellus
MGP_CAROLIEiJ_G0021989	Thoc1	100	96.195	ENSCCAG00000025766	THOC1	100	96.195	Cebus_capucinus
MGP_CAROLIEiJ_G0021989	Thoc1	100	92.846	ENSCATG00000028180	THOC1	99	95.787	Cercocebus_atys
MGP_CAROLIEiJ_G0021989	Thoc1	97	95.618	ENSCLAG00000009117	THOC1	100	95.618	Chinchilla_lanigera
MGP_CAROLIEiJ_G0021989	Thoc1	100	96.347	ENSCSAG00000017631	THOC1	100	96.347	Chlorocebus_sabaeus
MGP_CAROLIEiJ_G0021989	Thoc1	89	83.453	ENSCHOG00000010609	THOC1	89	83.453	Choloepus_hoffmanni
MGP_CAROLIEiJ_G0021989	Thoc1	99	92.214	ENSCPBG00000027558	THOC1	99	92.214	Chrysemys_picta_bellii
MGP_CAROLIEiJ_G0021989	Thoc1	74	48.008	ENSCING00000007663	-	100	47.705	Ciona_intestinalis
MGP_CAROLIEiJ_G0021989	Thoc1	93	46.815	ENSCSAVG00000010649	-	99	45.959	Ciona_savignyi
MGP_CAROLIEiJ_G0021989	Thoc1	100	96.195	ENSCANG00000034265	THOC1	100	96.195	Colobus_angolensis_palliatus
MGP_CAROLIEiJ_G0021989	Thoc1	100	98.174	ENSCGRG00001016464	Thoc1	99	98.174	Cricetulus_griseus_chok1gshd
MGP_CAROLIEiJ_G0021989	Thoc1	98	97.674	ENSCGRG00000010269	-	100	98.122	Cricetulus_griseus_crigri
MGP_CAROLIEiJ_G0021989	Thoc1	90	80.405	ENSCGRG00000003390	-	99	80.405	Cricetulus_griseus_crigri
MGP_CAROLIEiJ_G0021989	Thoc1	98	70.320	ENSCSEG00000012486	thoc1	99	71.865	Cynoglossus_semilaevis
MGP_CAROLIEiJ_G0021989	Thoc1	98	70.706	ENSCVAG00000020600	thoc1	99	70.706	Cyprinodon_variegatus
MGP_CAROLIEiJ_G0021989	Thoc1	99	74.351	ENSDARG00000088246	thoc1	99	74.351	Danio_rerio
MGP_CAROLIEiJ_G0021989	Thoc1	100	96.195	ENSDNOG00000019217	THOC1	100	96.195	Dasypus_novemcinctus
MGP_CAROLIEiJ_G0021989	Thoc1	99	89.833	ENSDORG00000008060	Thoc1	99	91.549	Dipodomys_ordii
MGP_CAROLIEiJ_G0021989	Thoc1	92	36.078	FBgn0037382	Hpr1	74	40.768	Drosophila_melanogaster
MGP_CAROLIEiJ_G0021989	Thoc1	91	75.000	ENSETEG00000004165	THOC1	100	75.000	Echinops_telfairi
MGP_CAROLIEiJ_G0021989	Thoc1	92	64.013	ENSEBUG00000005998	thoc1	98	65.340	Eptatretus_burgeri
MGP_CAROLIEiJ_G0021989	Thoc1	100	96.651	ENSEASG00005002549	THOC1	96	96.651	Equus_asinus_asinus
MGP_CAROLIEiJ_G0021989	Thoc1	100	97.108	ENSECAG00000009267	THOC1	90	97.108	Equus_caballus
MGP_CAROLIEiJ_G0021989	Thoc1	80	77.500	ENSEEUG00000012214	-	82	77.500	Erinaceus_europaeus
MGP_CAROLIEiJ_G0021989	Thoc1	99	73.018	ENSELUG00000023277	thoc1	99	73.018	Esox_lucius
MGP_CAROLIEiJ_G0021989	Thoc1	100	96.499	ENSFCAG00000022454	THOC1	87	96.499	Felis_catus
MGP_CAROLIEiJ_G0021989	Thoc1	97	90.980	ENSFALG00000006205	THOC1	99	90.980	Ficedula_albicollis
MGP_CAROLIEiJ_G0021989	Thoc1	98	95.827	ENSFDAG00000006842	THOC1	100	95.827	Fukomys_damarensis
MGP_CAROLIEiJ_G0021989	Thoc1	98	70.399	ENSFHEG00000008841	thoc1	99	70.399	Fundulus_heteroclitus
MGP_CAROLIEiJ_G0021989	Thoc1	98	71.472	ENSGMOG00000011486	thoc1	99	71.472	Gadus_morhua
MGP_CAROLIEiJ_G0021989	Thoc1	99	89.618	ENSGALG00000014915	THOC1	98	89.618	Gallus_gallus
MGP_CAROLIEiJ_G0021989	Thoc1	98	70.706	ENSGAFG00000021464	thoc1	98	71.770	Gambusia_affinis
MGP_CAROLIEiJ_G0021989	Thoc1	99	71.189	ENSGACG00000017361	thoc1	99	71.803	Gasterosteus_aculeatus
MGP_CAROLIEiJ_G0021989	Thoc1	99	91.756	ENSGAGG00000021230	-	98	91.756	Gopherus_agassizii
MGP_CAROLIEiJ_G0021989	Thoc1	100	96.043	ENSGGOG00000003013	THOC1	99	96.043	Gorilla_gorilla
MGP_CAROLIEiJ_G0021989	Thoc1	98	71.472	ENSHBUG00000009096	thoc1	99	71.472	Haplochromis_burtoni
MGP_CAROLIEiJ_G0021989	Thoc1	100	95.129	ENSHGLG00000003712	-	100	95.129	Heterocephalus_glaber_female
MGP_CAROLIEiJ_G0021989	Thoc1	71	94.667	ENSHGLG00000009264	-	99	94.667	Heterocephalus_glaber_female
MGP_CAROLIEiJ_G0021989	Thoc1	77	86.010	ENSHGLG00100002225	-	99	86.010	Heterocephalus_glaber_male
MGP_CAROLIEiJ_G0021989	Thoc1	100	95.434	ENSHGLG00100003570	THOC1	100	95.434	Heterocephalus_glaber_male
MGP_CAROLIEiJ_G0021989	Thoc1	89	73.624	ENSIPUG00000005306	thoc1	99	73.435	Ictalurus_punctatus
MGP_CAROLIEiJ_G0021989	Thoc1	100	96.499	ENSSTOG00000006484	THOC1	100	96.499	Ictidomys_tridecemlineatus
MGP_CAROLIEiJ_G0021989	Thoc1	52	94.412	ENSJJAG00000014893	-	96	94.412	Jaculus_jaculus
MGP_CAROLIEiJ_G0021989	Thoc1	98	70.661	ENSKMAG00000003904	thoc1	99	70.661	Kryptolebias_marmoratus
MGP_CAROLIEiJ_G0021989	Thoc1	99	72.061	ENSLBEG00000020372	thoc1	98	72.061	Labrus_bergylta
MGP_CAROLIEiJ_G0021989	Thoc1	99	79.421	ENSLACG00000014869	THOC1	99	78.473	Latimeria_chalumnae
MGP_CAROLIEiJ_G0021989	Thoc1	98	75.804	ENSLOCG00000002097	thoc1	99	75.153	Lepisosteus_oculatus
MGP_CAROLIEiJ_G0021989	Thoc1	100	95.738	ENSLAFG00000009585	THOC1	100	95.738	Loxodonta_africana
MGP_CAROLIEiJ_G0021989	Thoc1	100	96.347	ENSMFAG00000041520	THOC1	99	96.347	Macaca_fascicularis
MGP_CAROLIEiJ_G0021989	Thoc1	100	96.347	ENSMMUG00000004662	THOC1	100	96.347	Macaca_mulatta
MGP_CAROLIEiJ_G0021989	Thoc1	100	96.347	ENSMNEG00000040177	THOC1	99	96.347	Macaca_nemestrina
MGP_CAROLIEiJ_G0021989	Thoc1	100	96.347	ENSMLEG00000034201	THOC1	99	96.347	Mandrillus_leucophaeus
MGP_CAROLIEiJ_G0021989	Thoc1	94	72.347	ENSMAMG00000016747	thoc1	99	72.347	Mastacembelus_armatus
MGP_CAROLIEiJ_G0021989	Thoc1	98	71.472	ENSMZEG00005024609	thoc1	99	71.472	Maylandia_zebra
MGP_CAROLIEiJ_G0021989	Thoc1	97	89.564	ENSMGAG00000009811	THOC1	100	89.564	Meleagris_gallopavo
MGP_CAROLIEiJ_G0021989	Thoc1	100	98.478	ENSMAUG00000010272	Thoc1	99	98.478	Mesocricetus_auratus
MGP_CAROLIEiJ_G0021989	Thoc1	100	96.804	ENSMICG00000027200	THOC1	100	96.804	Microcebus_murinus
MGP_CAROLIEiJ_G0021989	Thoc1	99	86.107	ENSMOCG00000014924	-	96	86.107	Microtus_ochrogaster
MGP_CAROLIEiJ_G0021989	Thoc1	99	97.409	ENSMOCG00000014536	-	86	97.409	Microtus_ochrogaster
MGP_CAROLIEiJ_G0021989	Thoc1	92	72.222	ENSMMOG00000011772	thoc1	100	72.222	Mola_mola
MGP_CAROLIEiJ_G0021989	Thoc1	100	92.632	ENSMODG00000021482	THOC1	100	92.632	Monodelphis_domestica
MGP_CAROLIEiJ_G0021989	Thoc1	98	71.889	ENSMALG00000021872	thoc1	99	71.889	Monopterus_albus
MGP_CAROLIEiJ_G0021989	Thoc1	100	99.848	ENSMUSG00000024287	Thoc1	100	99.848	Mus_musculus
MGP_CAROLIEiJ_G0021989	Thoc1	100	99.848	MGP_PahariEiJ_G0018726	Thoc1	100	99.848	Mus_pahari
MGP_CAROLIEiJ_G0021989	Thoc1	100	99.696	MGP_SPRETEiJ_G0022905	Thoc1	100	99.696	Mus_spretus
MGP_CAROLIEiJ_G0021989	Thoc1	100	96.651	ENSMPUG00000005448	THOC1	100	96.651	Mustela_putorius_furo
MGP_CAROLIEiJ_G0021989	Thoc1	90	83.811	ENSMLUG00000027965	-	99	83.642	Myotis_lucifugus
MGP_CAROLIEiJ_G0021989	Thoc1	60	83.627	ENSMLUG00000024912	-	100	83.627	Myotis_lucifugus
MGP_CAROLIEiJ_G0021989	Thoc1	100	96.049	ENSMLUG00000004090	-	100	96.049	Myotis_lucifugus
MGP_CAROLIEiJ_G0021989	Thoc1	99	75.382	ENSNGAG00000008061	-	99	76.198	Nannospalax_galili
MGP_CAROLIEiJ_G0021989	Thoc1	100	96.956	ENSNGAG00000001401	-	100	96.956	Nannospalax_galili
MGP_CAROLIEiJ_G0021989	Thoc1	97	71.362	ENSNBRG00000005991	thoc1	98	71.362	Neolamprologus_brichardi
MGP_CAROLIEiJ_G0021989	Thoc1	100	96.347	ENSNLEG00000006835	THOC1	100	96.347	Nomascus_leucogenys
MGP_CAROLIEiJ_G0021989	Thoc1	97	81.221	ENSMEUG00000009756	THOC1	99	81.221	Notamacropus_eugenii
MGP_CAROLIEiJ_G0021989	Thoc1	100	76.712	ENSOPRG00000001108	THOC1	100	76.712	Ochotona_princeps
MGP_CAROLIEiJ_G0021989	Thoc1	100	89.498	ENSODEG00000006623	THOC1	100	89.498	Octodon_degus
MGP_CAROLIEiJ_G0021989	Thoc1	99	71.017	ENSONIG00000009440	thoc1	99	71.017	Oreochromis_niloticus
MGP_CAROLIEiJ_G0021989	Thoc1	100	96.499	ENSOCUG00000011601	THOC1	100	96.499	Oryctolagus_cuniculus
MGP_CAROLIEiJ_G0021989	Thoc1	98	71.319	ENSORLG00000017629	thoc1	99	71.319	Oryzias_latipes
MGP_CAROLIEiJ_G0021989	Thoc1	98	71.319	ENSORLG00020007567	thoc1	99	71.319	Oryzias_latipes_hni
MGP_CAROLIEiJ_G0021989	Thoc1	98	71.472	ENSORLG00015007356	thoc1	99	71.472	Oryzias_latipes_hsok
MGP_CAROLIEiJ_G0021989	Thoc1	98	70.399	ENSOMEG00000008200	thoc1	99	71.166	Oryzias_melastigma
MGP_CAROLIEiJ_G0021989	Thoc1	100	93.455	ENSOGAG00000000470	THOC1	99	93.455	Otolemur_garnettii
MGP_CAROLIEiJ_G0021989	Thoc1	98	95.659	ENSOARG00000009238	THOC1	98	95.659	Ovis_aries
MGP_CAROLIEiJ_G0021989	Thoc1	100	96.043	ENSPPAG00000031812	THOC1	99	96.043	Pan_paniscus
MGP_CAROLIEiJ_G0021989	Thoc1	100	96.195	ENSPPRG00000023794	THOC1	100	96.195	Panthera_pardus
MGP_CAROLIEiJ_G0021989	Thoc1	100	96.195	ENSPTIG00000007469	THOC1	100	96.195	Panthera_tigris_altaica
MGP_CAROLIEiJ_G0021989	Thoc1	100	95.181	ENSPTRG00000009816	THOC1	100	95.181	Pan_troglodytes
MGP_CAROLIEiJ_G0021989	Thoc1	100	95.310	ENSPANG00000008665	THOC1	100	95.310	Papio_anubis
MGP_CAROLIEiJ_G0021989	Thoc1	99	71.407	ENSPKIG00000005906	thoc1	99	72.171	Paramormyrops_kingsleyae
MGP_CAROLIEiJ_G0021989	Thoc1	81	93.621	ENSPSIG00000007691	THOC1	98	93.621	Pelodiscus_sinensis
MGP_CAROLIEiJ_G0021989	Thoc1	93	73.096	ENSPMGG00000008279	thoc1	95	73.096	Periophthalmus_magnuspinnatus
MGP_CAROLIEiJ_G0021989	Thoc1	100	99.087	ENSPEMG00000021789	Thoc1	100	99.087	Peromyscus_maniculatus_bairdii
MGP_CAROLIEiJ_G0021989	Thoc1	74	93.117	ENSPCIG00000026942	THOC1	98	93.117	Phascolarctos_cinereus
MGP_CAROLIEiJ_G0021989	Thoc1	98	70.968	ENSPFOG00000011673	thoc1	99	70.968	Poecilia_formosa
MGP_CAROLIEiJ_G0021989	Thoc1	98	70.859	ENSPLAG00000019648	thoc1	99	70.859	Poecilia_latipinna
MGP_CAROLIEiJ_G0021989	Thoc1	98	70.968	ENSPMEG00000007083	thoc1	99	70.968	Poecilia_mexicana
MGP_CAROLIEiJ_G0021989	Thoc1	98	70.706	ENSPREG00000006719	thoc1	99	70.706	Poecilia_reticulata
MGP_CAROLIEiJ_G0021989	Thoc1	74	96.920	ENSPPYG00000009049	-	99	96.920	Pongo_abelii
MGP_CAROLIEiJ_G0021989	Thoc1	100	85.997	ENSPCAG00000005320	THOC1	100	84.932	Procavia_capensis
MGP_CAROLIEiJ_G0021989	Thoc1	100	96.195	ENSPCOG00000009234	THOC1	100	96.195	Propithecus_coquereli
MGP_CAROLIEiJ_G0021989	Thoc1	100	94.368	ENSPVAG00000004007	THOC1	100	94.368	Pteropus_vampyrus
MGP_CAROLIEiJ_G0021989	Thoc1	98	71.472	ENSPNYG00000019152	thoc1	99	71.472	Pundamilia_nyererei
MGP_CAROLIEiJ_G0021989	Thoc1	98	73.538	ENSPNAG00000023390	thoc1	99	73.538	Pygocentrus_nattereri
MGP_CAROLIEiJ_G0021989	Thoc1	91	90.625	ENSRNOG00000015332	Thoc1	100	90.625	Rattus_norvegicus
MGP_CAROLIEiJ_G0021989	Thoc1	100	95.331	ENSRBIG00000033738	THOC1	99	97.217	Rhinopithecus_bieti
MGP_CAROLIEiJ_G0021989	Thoc1	100	96.347	ENSRROG00000044988	THOC1	100	96.347	Rhinopithecus_roxellana
MGP_CAROLIEiJ_G0021989	Thoc1	100	96.043	ENSSBOG00000016556	THOC1	99	96.043	Saimiri_boliviensis_boliviensis
MGP_CAROLIEiJ_G0021989	Thoc1	100	93.465	ENSSHAG00000014829	THOC1	100	93.465	Sarcophilus_harrisii
MGP_CAROLIEiJ_G0021989	Thoc1	98	73.773	ENSSFOG00015021527	thoc1	99	73.773	Scleropages_formosus
MGP_CAROLIEiJ_G0021989	Thoc1	98	70.031	ENSSMAG00000018465	thoc1	99	70.031	Scophthalmus_maximus
MGP_CAROLIEiJ_G0021989	Thoc1	98	72.657	ENSSDUG00000016810	thoc1	99	72.657	Seriola_dumerili
MGP_CAROLIEiJ_G0021989	Thoc1	98	72.350	ENSSLDG00000015555	thoc1	99	72.350	Seriola_lalandi_dorsalis
MGP_CAROLIEiJ_G0021989	Thoc1	88	95.785	ENSSARG00000006910	THOC1	88	95.785	Sorex_araneus
MGP_CAROLIEiJ_G0021989	Thoc1	98	89.441	ENSSPUG00000007238	THOC1	99	89.313	Sphenodon_punctatus
MGP_CAROLIEiJ_G0021989	Thoc1	98	68.960	ENSSPAG00000018847	thoc1	99	68.960	Stegastes_partitus
MGP_CAROLIEiJ_G0021989	Thoc1	100	96.956	ENSSSCG00000025653	THOC1	94	96.956	Sus_scrofa
MGP_CAROLIEiJ_G0021989	Thoc1	99	90.840	ENSTGUG00000010204	THOC1	99	90.840	Taeniopygia_guttata
MGP_CAROLIEiJ_G0021989	Thoc1	98	70.706	ENSTRUG00000013518	thoc1	99	70.706	Takifugu_rubripes
MGP_CAROLIEiJ_G0021989	Thoc1	98	71.166	ENSTNIG00000008473	thoc1	99	71.166	Tetraodon_nigroviridis
MGP_CAROLIEiJ_G0021989	Thoc1	100	89.346	ENSTBEG00000016920	THOC1	100	89.346	Tupaia_belangeri
MGP_CAROLIEiJ_G0021989	Thoc1	100	89.650	ENSTTRG00000016664	THOC1	100	89.650	Tursiops_truncatus
MGP_CAROLIEiJ_G0021989	Thoc1	100	96.499	ENSUAMG00000002527	THOC1	100	96.499	Ursus_americanus
MGP_CAROLIEiJ_G0021989	Thoc1	100	96.499	ENSUMAG00000019693	THOC1	100	96.499	Ursus_maritimus
MGP_CAROLIEiJ_G0021989	Thoc1	77	93.000	ENSVPAG00000003726	-	77	93.000	Vicugna_pacos
MGP_CAROLIEiJ_G0021989	Thoc1	100	96.651	ENSVVUG00000004384	THOC1	100	96.651	Vulpes_vulpes
MGP_CAROLIEiJ_G0021989	Thoc1	99	78.788	ENSXETG00000003155	thoc1	98	78.788	Xenopus_tropicalis
MGP_CAROLIEiJ_G0021989	Thoc1	93	69.231	ENSXCOG00000016085	thoc1	89	69.231	Xiphophorus_couchianus
MGP_CAROLIEiJ_G0021989	Thoc1	98	70.706	ENSXMAG00000002353	thoc1	99	70.706	Xiphophorus_maculatus