EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: MGP_CAROLIEiJ_G0022001 (Gene tree)
Gene ID: 110284740
Gene Symbol: Riok3
Alias: 1200013N13Rik|D18Ertd331e|E130306C24Rik|Sudd
Full Name: RIO kinase 3
Gene Type: protein_coding
Species: Mus_caroli
Status: putative
Strand: Plus strand
Length: 27411 bases
Position: chr18:8714625-8742035
Accession: 110284740
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CAROLIEiJ_P0046047	RIO1	PF01163.22	2.4e-74	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CAROLIEiJ_T0046047	-	3731	-	MGP_CAROLIEiJ_P0046047	519 (aa)	XP_021006272	UPI000A3150FB

Gene Model

Click here to download MGP_CAROLIEiJ_G0022001's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CAROLIEiJ_G0022001's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CAROLIEiJ_G0022001	Riok3	58	42.857	MGP_CAROLIEiJ_G0018439	Riok1	52	42.857

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_CAROLIEiJ_G0022001	Riok3	99	93.605	ENSG00000101782	RIOK3	99	93.605	Homo_sapiens
MGP_CAROLIEiJ_G0022001	Riok3	100	70.363	ENSAPOG00000020861	riok3	99	70.363	Acanthochromis_polyacanthus
MGP_CAROLIEiJ_G0022001	Riok3	99	94.380	ENSAMEG00000013754	RIOK3	85	94.380	Ailuropoda_melanoleuca
MGP_CAROLIEiJ_G0022001	Riok3	99	72.031	ENSACIG00000019894	riok3	98	73.861	Amphilophus_citrinellus
MGP_CAROLIEiJ_G0022001	Riok3	100	72.275	ENSAOCG00000007172	riok3	99	74.694	Amphiprion_ocellaris
MGP_CAROLIEiJ_G0022001	Riok3	100	72.084	ENSAPEG00000002536	riok3	99	73.878	Amphiprion_percula
MGP_CAROLIEiJ_G0022001	Riok3	96	73.054	ENSATEG00000018303	riok3	99	73.054	Anabas_testudineus
MGP_CAROLIEiJ_G0022001	Riok3	99	86.214	ENSAPLG00000006497	RIOK3	99	86.214	Anas_platyrhynchos
MGP_CAROLIEiJ_G0022001	Riok3	99	83.398	ENSACAG00000000159	RIOK3	99	83.398	Anolis_carolinensis
MGP_CAROLIEiJ_G0022001	Riok3	99	70.192	ENSANAG00000030146	RIOK3	99	70.192	Aotus_nancymaae
MGP_CAROLIEiJ_G0022001	Riok3	93	74.897	ENSACLG00000018966	riok3	98	74.897	Astatotilapia_calliptera
MGP_CAROLIEiJ_G0022001	Riok3	97	73.913	ENSAMXG00000015617	riok3	99	72.989	Astyanax_mexicanus
MGP_CAROLIEiJ_G0022001	Riok3	99	94.961	ENSBTAG00000010042	RIOK3	99	94.961	Bos_taurus
MGP_CAROLIEiJ_G0022001	Riok3	93	35.758	WBGene00014012	riok-3	91	35.758	Caenorhabditis_elegans
MGP_CAROLIEiJ_G0022001	Riok3	99	94.757	ENSCJAG00000020556	RIOK3	99	94.757	Callithrix_jacchus
MGP_CAROLIEiJ_G0022001	Riok3	99	94.767	ENSCAFG00000018201	RIOK3	99	94.767	Canis_familiaris
MGP_CAROLIEiJ_G0022001	Riok3	99	94.553	ENSCAFG00020014801	RIOK3	99	95.620	Canis_lupus_dingo
MGP_CAROLIEiJ_G0022001	Riok3	99	95.155	ENSCHIG00000009312	RIOK3	99	95.354	Capra_hircus
MGP_CAROLIEiJ_G0022001	Riok3	99	94.369	ENSTSYG00000000142	RIOK3	99	94.866	Carlito_syrichta
MGP_CAROLIEiJ_G0022001	Riok3	88	95.833	ENSCAPG00000005756	RIOK3	94	95.833	Cavia_aperea
MGP_CAROLIEiJ_G0022001	Riok3	99	94.186	ENSCPOG00000007991	RIOK3	99	94.186	Cavia_porcellus
MGP_CAROLIEiJ_G0022001	Riok3	99	94.563	ENSCCAG00000028338	RIOK3	97	94.024	Cebus_capucinus
MGP_CAROLIEiJ_G0022001	Riok3	99	93.605	ENSCATG00000040824	RIOK3	99	93.605	Cercocebus_atys
MGP_CAROLIEiJ_G0022001	Riok3	100	94.027	ENSCLAG00000006767	RIOK3	100	94.027	Chinchilla_lanigera
MGP_CAROLIEiJ_G0022001	Riok3	99	93.798	ENSCSAG00000017680	RIOK3	99	93.798	Chlorocebus_sabaeus
MGP_CAROLIEiJ_G0022001	Riok3	87	95.203	ENSCHOG00000008343	RIOK3	87	95.203	Choloepus_hoffmanni
MGP_CAROLIEiJ_G0022001	Riok3	99	85.934	ENSCPBG00000027226	RIOK3	99	85.934	Chrysemys_picta_bellii
MGP_CAROLIEiJ_G0022001	Riok3	97	49.343	ENSCSAVG00000003068	-	100	51.434	Ciona_savignyi
MGP_CAROLIEiJ_G0022001	Riok3	87	89.189	ENSCANG00000035939	RIOK3	92	94.475	Colobus_angolensis_palliatus
MGP_CAROLIEiJ_G0022001	Riok3	100	96.146	ENSCGRG00001013249	Riok3	100	96.146	Cricetulus_griseus_chok1gshd
MGP_CAROLIEiJ_G0022001	Riok3	100	95.761	ENSCGRG00000017636	Riok3	100	95.761	Cricetulus_griseus_crigri
MGP_CAROLIEiJ_G0022001	Riok3	99	70.498	ENSCSEG00000018289	riok3	99	73.029	Cynoglossus_semilaevis
MGP_CAROLIEiJ_G0022001	Riok3	99	71.098	ENSCVAG00000011848	riok3	99	71.098	Cyprinodon_variegatus
MGP_CAROLIEiJ_G0022001	Riok3	100	71.727	ENSDARG00000042751	riok3	99	71.727	Danio_rerio
MGP_CAROLIEiJ_G0022001	Riok3	99	94.186	ENSDNOG00000039433	RIOK3	99	94.186	Dasypus_novemcinctus
MGP_CAROLIEiJ_G0022001	Riok3	100	94.990	ENSDORG00000011663	Riok3	100	94.990	Dipodomys_ordii
MGP_CAROLIEiJ_G0022001	Riok3	87	41.973	FBgn0031643	CG3008	84	42.969	Drosophila_melanogaster
MGP_CAROLIEiJ_G0022001	Riok3	93	92.355	ENSETEG00000003689	RIOK3	100	92.355	Echinops_telfairi
MGP_CAROLIEiJ_G0022001	Riok3	94	53.768	ENSEBUG00000000555	riok3	96	53.768	Eptatretus_burgeri
MGP_CAROLIEiJ_G0022001	Riok3	99	92.636	ENSEASG00005002317	RIOK3	99	92.636	Equus_asinus_asinus
MGP_CAROLIEiJ_G0022001	Riok3	99	92.829	ENSECAG00000009028	RIOK3	99	92.829	Equus_caballus
MGP_CAROLIEiJ_G0022001	Riok3	95	76.566	ENSEEUG00000007005	RIOK3	99	76.566	Erinaceus_europaeus
MGP_CAROLIEiJ_G0022001	Riok3	99	72.780	ENSELUG00000017655	riok3	99	72.780	Esox_lucius
MGP_CAROLIEiJ_G0022001	Riok3	99	95.155	ENSFCAG00000000517	RIOK3	99	95.155	Felis_catus
MGP_CAROLIEiJ_G0022001	Riok3	96	86.145	ENSFALG00000006145	RIOK3	99	84.586	Ficedula_albicollis
MGP_CAROLIEiJ_G0022001	Riok3	100	92.871	ENSFDAG00000001548	RIOK3	100	92.871	Fukomys_damarensis
MGP_CAROLIEiJ_G0022001	Riok3	93	74.691	ENSFHEG00000011350	riok3	99	71.815	Fundulus_heteroclitus
MGP_CAROLIEiJ_G0022001	Riok3	88	73.581	ENSGMOG00000005157	riok3	98	73.581	Gadus_morhua
MGP_CAROLIEiJ_G0022001	Riok3	96	86.400	ENSGALG00000015004	RIOK3	99	85.029	Gallus_gallus
MGP_CAROLIEiJ_G0022001	Riok3	89	64.592	ENSGAFG00000002403	riok3	88	64.592	Gambusia_affinis
MGP_CAROLIEiJ_G0022001	Riok3	95	72.709	ENSGACG00000000880	riok3	97	72.709	Gasterosteus_aculeatus
MGP_CAROLIEiJ_G0022001	Riok3	99	83.622	ENSGAGG00000024785	RIOK3	99	83.622	Gopherus_agassizii
MGP_CAROLIEiJ_G0022001	Riok3	56	92.734	ENSGGOG00000036734	-	93	92.734	Gorilla_gorilla
MGP_CAROLIEiJ_G0022001	Riok3	99	71.429	ENSHBUG00000003233	riok3	99	71.429	Haplochromis_burtoni
MGP_CAROLIEiJ_G0022001	Riok3	100	93.449	ENSHGLG00000003885	RIOK3	100	93.449	Heterocephalus_glaber_female
MGP_CAROLIEiJ_G0022001	Riok3	100	93.449	ENSHGLG00100002077	RIOK3	100	93.449	Heterocephalus_glaber_male
MGP_CAROLIEiJ_G0022001	Riok3	99	71.042	ENSHCOG00000006794	riok3	97	71.042	Hippocampus_comes
MGP_CAROLIEiJ_G0022001	Riok3	96	73.600	ENSIPUG00000001406	Riok3	98	73.600	Ictalurus_punctatus
MGP_CAROLIEiJ_G0022001	Riok3	99	96.124	ENSSTOG00000006517	RIOK3	99	96.124	Ictidomys_tridecemlineatus
MGP_CAROLIEiJ_G0022001	Riok3	100	94.275	ENSJJAG00000023689	Riok3	100	94.275	Jaculus_jaculus
MGP_CAROLIEiJ_G0022001	Riok3	99	71.705	ENSKMAG00000007259	riok3	99	71.705	Kryptolebias_marmoratus
MGP_CAROLIEiJ_G0022001	Riok3	97	71.937	ENSLBEG00000013689	riok3	98	71.937	Labrus_bergylta
MGP_CAROLIEiJ_G0022001	Riok3	99	75.000	ENSLACG00000017326	RIOK3	99	75.000	Latimeria_chalumnae
MGP_CAROLIEiJ_G0022001	Riok3	100	76.154	ENSLOCG00000001652	riok3	100	76.154	Lepisosteus_oculatus
MGP_CAROLIEiJ_G0022001	Riok3	99	92.636	ENSLAFG00000001380	RIOK3	99	92.636	Loxodonta_africana
MGP_CAROLIEiJ_G0022001	Riok3	99	93.992	ENSMMUG00000021478	RIOK3	99	93.992	Macaca_mulatta
MGP_CAROLIEiJ_G0022001	Riok3	99	82.558	ENSMNEG00000041106	RIOK3	99	82.558	Macaca_nemestrina
MGP_CAROLIEiJ_G0022001	Riok3	99	93.992	ENSMLEG00000028187	RIOK3	99	93.992	Mandrillus_leucophaeus
MGP_CAROLIEiJ_G0022001	Riok3	95	72.837	ENSMAMG00000008502	riok3	97	72.745	Mastacembelus_armatus
MGP_CAROLIEiJ_G0022001	Riok3	99	71.622	ENSMZEG00005020212	riok3	99	71.622	Maylandia_zebra
MGP_CAROLIEiJ_G0022001	Riok3	99	83.977	ENSMGAG00000010079	RIOK3	99	83.977	Meleagris_gallopavo
MGP_CAROLIEiJ_G0022001	Riok3	100	97.110	ENSMAUG00000020527	Riok3	100	97.110	Mesocricetus_auratus
MGP_CAROLIEiJ_G0022001	Riok3	100	95.183	ENSMICG00000009293	RIOK3	100	95.183	Microcebus_murinus
MGP_CAROLIEiJ_G0022001	Riok3	99	95.728	ENSMOCG00000012114	Riok3	96	95.728	Microtus_ochrogaster
MGP_CAROLIEiJ_G0022001	Riok3	93	71.458	ENSMMOG00000019204	riok3	98	71.458	Mola_mola
MGP_CAROLIEiJ_G0022001	Riok3	99	90.522	ENSMODG00000021496	RIOK3	99	90.522	Monodelphis_domestica
MGP_CAROLIEiJ_G0022001	Riok3	100	71.511	ENSMALG00000020848	riok3	99	71.511	Monopterus_albus
MGP_CAROLIEiJ_G0022001	Riok3	100	99.037	ENSMUSG00000024404	Riok3	100	99.037	Mus_musculus
MGP_CAROLIEiJ_G0022001	Riok3	100	99.229	MGP_PahariEiJ_G0018739	Riok3	100	99.229	Mus_pahari
MGP_CAROLIEiJ_G0022001	Riok3	99	94.767	ENSMPUG00000005772	RIOK3	99	94.767	Mustela_putorius_furo
MGP_CAROLIEiJ_G0022001	Riok3	99	93.592	ENSMLUG00000007081	RIOK3	99	93.592	Myotis_lucifugus
MGP_CAROLIEiJ_G0022001	Riok3	100	95.568	ENSNGAG00000011446	Riok3	100	95.568	Nannospalax_galili
MGP_CAROLIEiJ_G0022001	Riok3	75	72.596	ENSNBRG00000016677	riok3	83	72.596	Neolamprologus_brichardi
MGP_CAROLIEiJ_G0022001	Riok3	99	93.992	ENSNLEG00000006758	RIOK3	99	93.992	Nomascus_leucogenys
MGP_CAROLIEiJ_G0022001	Riok3	99	88.781	ENSMEUG00000006292	RIOK3	99	88.781	Notamacropus_eugenii
MGP_CAROLIEiJ_G0022001	Riok3	100	93.449	ENSOPRG00000004803	RIOK3	100	93.449	Ochotona_princeps
MGP_CAROLIEiJ_G0022001	Riok3	99	94.004	ENSODEG00000006444	RIOK3	99	94.004	Octodon_degus
MGP_CAROLIEiJ_G0022001	Riok3	95	72.455	ENSONIG00000013422	riok3	99	72.455	Oreochromis_niloticus
MGP_CAROLIEiJ_G0022001	Riok3	93	89.506	ENSOANG00000012074	RIOK3	99	89.506	Ornithorhynchus_anatinus
MGP_CAROLIEiJ_G0022001	Riok3	99	95.155	ENSOCUG00000016820	RIOK3	99	95.155	Oryctolagus_cuniculus
MGP_CAROLIEiJ_G0022001	Riok3	97	72.565	ENSORLG00000003395	riok3	98	72.565	Oryzias_latipes
MGP_CAROLIEiJ_G0022001	Riok3	97	72.366	ENSORLG00020000672	riok3	98	72.366	Oryzias_latipes_hni
MGP_CAROLIEiJ_G0022001	Riok3	97	72.565	ENSORLG00015007372	riok3	98	72.565	Oryzias_latipes_hsok
MGP_CAROLIEiJ_G0022001	Riok3	97	72.565	ENSOMEG00000001380	riok3	98	72.565	Oryzias_melastigma
MGP_CAROLIEiJ_G0022001	Riok3	100	95.761	ENSOGAG00000014502	RIOK3	90	95.761	Otolemur_garnettii
MGP_CAROLIEiJ_G0022001	Riok3	99	95.349	ENSOARG00000008042	RIOK3	99	95.349	Ovis_aries
MGP_CAROLIEiJ_G0022001	Riok3	99	93.798	ENSPPAG00000030258	RIOK3	99	93.798	Pan_paniscus
MGP_CAROLIEiJ_G0022001	Riok3	99	95.349	ENSPPRG00000023302	RIOK3	99	95.349	Panthera_pardus
MGP_CAROLIEiJ_G0022001	Riok3	99	95.349	ENSPTIG00000000960	RIOK3	99	95.349	Panthera_tigris_altaica
MGP_CAROLIEiJ_G0022001	Riok3	99	93.605	ENSPTRG00000009918	RIOK3	99	93.605	Pan_troglodytes
MGP_CAROLIEiJ_G0022001	Riok3	99	93.992	ENSPANG00000011485	RIOK3	99	93.992	Papio_anubis
MGP_CAROLIEiJ_G0022001	Riok3	96	77.445	ENSPKIG00000018297	riok3	98	77.445	Paramormyrops_kingsleyae
MGP_CAROLIEiJ_G0022001	Riok3	99	84.170	ENSPSIG00000006250	RIOK3	99	84.170	Pelodiscus_sinensis
MGP_CAROLIEiJ_G0022001	Riok3	92	72.292	ENSPMGG00000009414	riok3	99	72.292	Periophthalmus_magnuspinnatus
MGP_CAROLIEiJ_G0022001	Riok3	100	96.917	ENSPEMG00000023794	Riok3	100	96.917	Peromyscus_maniculatus_bairdii
MGP_CAROLIEiJ_G0022001	Riok3	83	71.363	ENSPMAG00000003258	riok3	97	71.363	Petromyzon_marinus
MGP_CAROLIEiJ_G0022001	Riok3	92	90.397	ENSPCIG00000013991	RIOK3	99	90.397	Phascolarctos_cinereus
MGP_CAROLIEiJ_G0022001	Riok3	93	74.227	ENSPFOG00000024127	riok3	97	73.092	Poecilia_formosa
MGP_CAROLIEiJ_G0022001	Riok3	93	74.433	ENSPLAG00000004956	riok3	97	73.293	Poecilia_latipinna
MGP_CAROLIEiJ_G0022001	Riok3	93	74.538	ENSPMEG00000020108	riok3	97	73.547	Poecilia_mexicana
MGP_CAROLIEiJ_G0022001	Riok3	100	70.857	ENSPREG00000010010	riok3	100	70.857	Poecilia_reticulata
MGP_CAROLIEiJ_G0022001	Riok3	99	87.597	ENSPPYG00000009062	RIOK3	99	87.597	Pongo_abelii
MGP_CAROLIEiJ_G0022001	Riok3	76	90.775	ENSPCAG00000001021	RIOK3	76	90.775	Procavia_capensis
MGP_CAROLIEiJ_G0022001	Riok3	99	95.543	ENSPCOG00000022631	RIOK3	99	95.543	Propithecus_coquereli
MGP_CAROLIEiJ_G0022001	Riok3	99	79.845	ENSPVAG00000015817	RIOK3	99	79.845	Pteropus_vampyrus
MGP_CAROLIEiJ_G0022001	Riok3	99	71.622	ENSPNYG00000003271	riok3	99	71.622	Pundamilia_nyererei
MGP_CAROLIEiJ_G0022001	Riok3	100	73.384	ENSPNAG00000006213	riok3	99	73.384	Pygocentrus_nattereri
MGP_CAROLIEiJ_G0022001	Riok3	100	96.532	ENSRNOG00000023376	Riok3	100	96.532	Rattus_norvegicus
MGP_CAROLIEiJ_G0022001	Riok3	99	93.592	ENSRBIG00000035071	RIOK3	99	93.592	Rhinopithecus_bieti
MGP_CAROLIEiJ_G0022001	Riok3	99	93.398	ENSRROG00000045710	RIOK3	99	93.398	Rhinopithecus_roxellana
MGP_CAROLIEiJ_G0022001	Riok3	99	94.757	ENSSBOG00000034387	RIOK3	99	94.757	Saimiri_boliviensis_boliviensis
MGP_CAROLIEiJ_G0022001	Riok3	99	89.942	ENSSHAG00000011854	RIOK3	99	89.942	Sarcophilus_harrisii
MGP_CAROLIEiJ_G0022001	Riok3	100	73.092	ENSSFOG00015012912	riok3	98	75.703	Scleropages_formosus
MGP_CAROLIEiJ_G0022001	Riok3	99	71.538	ENSSMAG00000011527	riok3	99	71.538	Scophthalmus_maximus
MGP_CAROLIEiJ_G0022001	Riok3	99	72.308	ENSSDUG00000016018	riok3	99	72.308	Seriola_dumerili
MGP_CAROLIEiJ_G0022001	Riok3	58	81.707	ENSSLDG00000022246	riok3	93	77.222	Seriola_lalandi_dorsalis
MGP_CAROLIEiJ_G0022001	Riok3	87	95.203	ENSSARG00000010154	RIOK3	87	95.203	Sorex_araneus
MGP_CAROLIEiJ_G0022001	Riok3	99	85.907	ENSSPUG00000015246	RIOK3	99	85.907	Sphenodon_punctatus
MGP_CAROLIEiJ_G0022001	Riok3	100	71.511	ENSSPAG00000000601	riok3	99	71.511	Stegastes_partitus
MGP_CAROLIEiJ_G0022001	Riok3	99	95.349	ENSSSCG00000029518	RIOK3	99	96.347	Sus_scrofa
MGP_CAROLIEiJ_G0022001	Riok3	96	86.145	ENSTGUG00000010392	RIOK3	99	84.586	Taeniopygia_guttata
MGP_CAROLIEiJ_G0022001	Riok3	99	70.385	ENSTRUG00000007055	riok3	99	70.385	Takifugu_rubripes
MGP_CAROLIEiJ_G0022001	Riok3	93	67.695	ENSTNIG00000001855	riok3	99	67.695	Tetraodon_nigroviridis
MGP_CAROLIEiJ_G0022001	Riok3	54	97.222	ENSTBEG00000015851	RIOK3	54	97.222	Tupaia_belangeri
MGP_CAROLIEiJ_G0022001	Riok3	99	93.992	ENSTTRG00000008839	RIOK3	99	93.992	Tursiops_truncatus
MGP_CAROLIEiJ_G0022001	Riok3	99	94.369	ENSUAMG00000018410	RIOK3	99	94.369	Ursus_americanus
MGP_CAROLIEiJ_G0022001	Riok3	98	94.521	ENSUMAG00000020218	RIOK3	97	94.521	Ursus_maritimus
MGP_CAROLIEiJ_G0022001	Riok3	99	95.155	ENSVPAG00000009034	RIOK3	99	95.155	Vicugna_pacos
MGP_CAROLIEiJ_G0022001	Riok3	99	94.767	ENSVVUG00000003651	RIOK3	75	94.767	Vulpes_vulpes
MGP_CAROLIEiJ_G0022001	Riok3	99	76.893	ENSXETG00000027370	riok3	99	76.893	Xenopus_tropicalis
MGP_CAROLIEiJ_G0022001	Riok3	95	72.112	ENSXCOG00000001032	riok3	99	72.112	Xiphophorus_couchianus
MGP_CAROLIEiJ_G0022001	Riok3	95	72.565	ENSXMAG00000012902	riok3	97	72.565	Xiphophorus_maculatus