EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_CAROLIEiJ_G0022075 (Gene tree)
Gene ID: 110284503
Gene Symbol: Ercc3
Alias: XPB
Full Name: ERCC excision repair 3%2C TFIIH core complex helicase subunit
Gene Type: protein_coding
Species: Mus_caroli
Status: putative
Strand: Plus strand
Length: 30495 bases
Position: chr18:29594336-29624830
Accession: 110284503
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CAROLIEiJ_P0046232	ResIII	PF04851.15	2.4e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CAROLIEiJ_T0046234	-	715	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0046233	-	2816	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0046232	-	2725	XM_021150266	MGP_CAROLIEiJ_P0046232	782 (aa)	XP_021005925	UPI000A318016

Gene Model

Click here to download MGP_CAROLIEiJ_G0022075's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CAROLIEiJ_G0022075's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_CAROLIEiJ_G0022075	Ercc3	100	95.908	ENSG00000163161	ERCC3	99	100.000	Homo_sapiens
MGP_CAROLIEiJ_G0022075	Ercc3	100	88.550	ENSAPOG00000014383	ercc3	100	88.422	Acanthochromis_polyacanthus
MGP_CAROLIEiJ_G0022075	Ercc3	100	95.652	ENSAMEG00000016840	ERCC3	100	95.652	Ailuropoda_melanoleuca
MGP_CAROLIEiJ_G0022075	Ercc3	99	87.387	ENSACIG00000000126	ercc3	98	88.011	Amphilophus_citrinellus
MGP_CAROLIEiJ_G0022075	Ercc3	100	88.422	ENSAOCG00000009396	ercc3	100	88.550	Amphiprion_ocellaris
MGP_CAROLIEiJ_G0022075	Ercc3	100	88.422	ENSAPEG00000023077	ercc3	100	88.550	Amphiprion_percula
MGP_CAROLIEiJ_G0022075	Ercc3	100	87.532	ENSATEG00000014860	ercc3	100	87.786	Anabas_testudineus
MGP_CAROLIEiJ_G0022075	Ercc3	91	93.521	ENSAPLG00000012068	ERCC3	98	93.521	Anas_platyrhynchos
MGP_CAROLIEiJ_G0022075	Ercc3	92	93.046	ENSACAG00000009919	ERCC3	100	93.046	Anolis_carolinensis
MGP_CAROLIEiJ_G0022075	Ercc3	100	96.036	ENSANAG00000031091	ERCC3	100	96.036	Aotus_nancymaae
MGP_CAROLIEiJ_G0022075	Ercc3	100	87.532	ENSACLG00000022508	ercc3	100	86.896	Astatotilapia_calliptera
MGP_CAROLIEiJ_G0022075	Ercc3	100	87.883	ENSAMXG00000036947	ercc3	100	87.372	Astyanax_mexicanus
MGP_CAROLIEiJ_G0022075	Ercc3	100	95.524	ENSBTAG00000020777	ERCC3	100	95.524	Bos_taurus
MGP_CAROLIEiJ_G0022075	Ercc3	99	62.935	WBGene00013441	xpb-1	97	64.858	Caenorhabditis_elegans
MGP_CAROLIEiJ_G0022075	Ercc3	100	96.036	ENSCJAG00000010416	ERCC3	100	96.036	Callithrix_jacchus
MGP_CAROLIEiJ_G0022075	Ercc3	100	96.292	ENSCAFG00000004497	ERCC3	100	96.292	Canis_familiaris
MGP_CAROLIEiJ_G0022075	Ercc3	100	96.292	ENSCAFG00020003495	ERCC3	100	96.292	Canis_lupus_dingo
MGP_CAROLIEiJ_G0022075	Ercc3	100	95.908	ENSCHIG00000014551	ERCC3	100	95.908	Capra_hircus
MGP_CAROLIEiJ_G0022075	Ercc3	99	95.472	ENSTSYG00000004137	ERCC3	97	96.543	Carlito_syrichta
MGP_CAROLIEiJ_G0022075	Ercc3	89	80.802	ENSCAPG00000017027	ERCC3	100	80.802	Cavia_aperea
MGP_CAROLIEiJ_G0022075	Ercc3	100	95.780	ENSCPOG00000002144	ERCC3	100	95.780	Cavia_porcellus
MGP_CAROLIEiJ_G0022075	Ercc3	100	96.036	ENSCCAG00000024421	ERCC3	100	96.036	Cebus_capucinus
MGP_CAROLIEiJ_G0022075	Ercc3	100	96.164	ENSCATG00000032313	ERCC3	100	96.164	Cercocebus_atys
MGP_CAROLIEiJ_G0022075	Ercc3	100	96.547	ENSCLAG00000002965	ERCC3	96	96.547	Chinchilla_lanigera
MGP_CAROLIEiJ_G0022075	Ercc3	100	96.036	ENSCSAG00000016827	ERCC3	100	96.036	Chlorocebus_sabaeus
MGP_CAROLIEiJ_G0022075	Ercc3	83	97.076	ENSCHOG00000007414	ERCC3	83	97.076	Choloepus_hoffmanni
MGP_CAROLIEiJ_G0022075	Ercc3	92	93.463	ENSCPBG00000013638	ERCC3	100	93.463	Chrysemys_picta_bellii
MGP_CAROLIEiJ_G0022075	Ercc3	96	72.251	ENSCING00000002867	ercc3	96	72.251	Ciona_intestinalis
MGP_CAROLIEiJ_G0022075	Ercc3	100	96.036	ENSCANG00000007094	ERCC3	100	96.036	Colobus_angolensis_palliatus
MGP_CAROLIEiJ_G0022075	Ercc3	100	97.954	ENSCGRG00001009426	Ercc3	100	97.954	Cricetulus_griseus_chok1gshd
MGP_CAROLIEiJ_G0022075	Ercc3	97	96.974	ENSCGRG00000015547	Ercc3	100	96.974	Cricetulus_griseus_crigri
MGP_CAROLIEiJ_G0022075	Ercc3	100	86.658	ENSCSEG00000016479	ercc3	100	86.658	Cynoglossus_semilaevis
MGP_CAROLIEiJ_G0022075	Ercc3	100	88.295	ENSCVAG00000015177	ercc3	100	88.168	Cyprinodon_variegatus
MGP_CAROLIEiJ_G0022075	Ercc3	96	89.564	ENSDARG00000002402	ercc3	100	87.898	Danio_rerio
MGP_CAROLIEiJ_G0022075	Ercc3	56	97.506	ENSDNOG00000035027	ERCC3	95	97.506	Dasypus_novemcinctus
MGP_CAROLIEiJ_G0022075	Ercc3	96	97.078	ENSDORG00000004671	Ercc3	100	96.164	Dipodomys_ordii
MGP_CAROLIEiJ_G0022075	Ercc3	99	68.625	FBgn0001179	hay	94	70.696	Drosophila_melanogaster
MGP_CAROLIEiJ_G0022075	Ercc3	90	96.166	ENSETEG00000019887	ERCC3	90	96.166	Echinops_telfairi
MGP_CAROLIEiJ_G0022075	Ercc3	100	80.025	ENSEBUG00000009773	ercc3	95	82.517	Eptatretus_burgeri
MGP_CAROLIEiJ_G0022075	Ercc3	100	93.766	ENSEASG00005022466	ERCC3	100	93.766	Equus_asinus_asinus
MGP_CAROLIEiJ_G0022075	Ercc3	100	96.164	ENSECAG00000006589	ERCC3	100	96.164	Equus_caballus
MGP_CAROLIEiJ_G0022075	Ercc3	93	94.270	ENSEEUG00000001057	ERCC3	97	95.238	Erinaceus_europaeus
MGP_CAROLIEiJ_G0022075	Ercc3	100	86.260	ENSELUG00000000089	ercc3	99	86.260	Esox_lucius
MGP_CAROLIEiJ_G0022075	Ercc3	100	96.292	ENSFCAG00000006989	ERCC3	100	96.292	Felis_catus
MGP_CAROLIEiJ_G0022075	Ercc3	99	91.634	ENSFALG00000003936	ERCC3	96	92.593	Ficedula_albicollis
MGP_CAROLIEiJ_G0022075	Ercc3	100	95.269	ENSFDAG00000011924	ERCC3	100	95.269	Fukomys_damarensis
MGP_CAROLIEiJ_G0022075	Ercc3	100	87.532	ENSFHEG00000005185	ercc3	100	87.277	Fundulus_heteroclitus
MGP_CAROLIEiJ_G0022075	Ercc3	100	84.949	ENSGMOG00000018032	ercc3	99	84.694	Gadus_morhua
MGP_CAROLIEiJ_G0022075	Ercc3	96	92.308	ENSGALG00000011515	ERCC3	99	91.774	Gallus_gallus
MGP_CAROLIEiJ_G0022075	Ercc3	100	88.168	ENSGAFG00000011936	ercc3	100	87.913	Gambusia_affinis
MGP_CAROLIEiJ_G0022075	Ercc3	100	86.768	ENSGACG00000015218	ercc3	100	86.768	Gasterosteus_aculeatus
MGP_CAROLIEiJ_G0022075	Ercc3	92	93.463	ENSGAGG00000018579	ERCC3	100	93.463	Gopherus_agassizii
MGP_CAROLIEiJ_G0022075	Ercc3	100	96.036	ENSGGOG00000015255	ERCC3	100	96.036	Gorilla_gorilla
MGP_CAROLIEiJ_G0022075	Ercc3	100	87.532	ENSHBUG00000003818	ercc3	100	86.896	Haplochromis_burtoni
MGP_CAROLIEiJ_G0022075	Ercc3	100	96.419	ENSHGLG00000011014	ERCC3	100	96.419	Heterocephalus_glaber_female
MGP_CAROLIEiJ_G0022075	Ercc3	100	96.419	ENSHGLG00100013806	ERCC3	100	96.419	Heterocephalus_glaber_male
MGP_CAROLIEiJ_G0022075	Ercc3	100	87.261	ENSHCOG00000016924	ercc3	100	86.497	Hippocampus_comes
MGP_CAROLIEiJ_G0022075	Ercc3	100	87.134	ENSIPUG00000021000	ercc3	100	87.134	Ictalurus_punctatus
MGP_CAROLIEiJ_G0022075	Ercc3	100	96.547	ENSSTOG00000011001	ERCC3	100	96.547	Ictidomys_tridecemlineatus
MGP_CAROLIEiJ_G0022075	Ercc3	90	95.745	ENSJJAG00000001117	Ercc3	100	95.745	Jaculus_jaculus
MGP_CAROLIEiJ_G0022075	Ercc3	100	87.786	ENSKMAG00000021764	ercc3	100	87.405	Kryptolebias_marmoratus
MGP_CAROLIEiJ_G0022075	Ercc3	100	87.261	ENSLBEG00000000468	ercc3	100	87.006	Labrus_bergylta
MGP_CAROLIEiJ_G0022075	Ercc3	96	87.076	ENSLACG00000014815	ERCC3	100	86.289	Latimeria_chalumnae
MGP_CAROLIEiJ_G0022075	Ercc3	94	82.258	ENSLOCG00000010907	ercc3	92	82.258	Lepisosteus_oculatus
MGP_CAROLIEiJ_G0022075	Ercc3	100	95.524	ENSLAFG00000014866	ERCC3	100	95.524	Loxodonta_africana
MGP_CAROLIEiJ_G0022075	Ercc3	100	96.164	ENSMFAG00000003370	ERCC3	100	96.164	Macaca_fascicularis
MGP_CAROLIEiJ_G0022075	Ercc3	100	92.172	ENSMNEG00000004215	ERCC3	100	92.172	Macaca_nemestrina
MGP_CAROLIEiJ_G0022075	Ercc3	100	96.164	ENSMLEG00000042061	ERCC3	100	96.164	Mandrillus_leucophaeus
MGP_CAROLIEiJ_G0022075	Ercc3	100	87.786	ENSMAMG00000004505	ercc3	99	87.659	Mastacembelus_armatus
MGP_CAROLIEiJ_G0022075	Ercc3	100	87.532	ENSMZEG00005004854	ercc3	100	86.896	Maylandia_zebra
MGP_CAROLIEiJ_G0022075	Ercc3	90	93.333	ENSMGAG00000011706	ERCC3	100	93.333	Meleagris_gallopavo
MGP_CAROLIEiJ_G0022075	Ercc3	100	97.446	ENSMAUG00000004515	Ercc3	100	97.446	Mesocricetus_auratus
MGP_CAROLIEiJ_G0022075	Ercc3	100	97.059	ENSMICG00000009578	ERCC3	100	97.059	Microcebus_murinus
MGP_CAROLIEiJ_G0022075	Ercc3	100	98.465	ENSMOCG00000021767	Ercc3	100	98.465	Microtus_ochrogaster
MGP_CAROLIEiJ_G0022075	Ercc3	99	86.434	ENSMMOG00000018174	ercc3	96	87.285	Mola_mola
MGP_CAROLIEiJ_G0022075	Ercc3	96	95.358	ENSMODG00000018695	ERCC3	100	94.636	Monodelphis_domestica
MGP_CAROLIEiJ_G0022075	Ercc3	100	87.913	ENSMALG00000014944	ercc3	100	87.277	Monopterus_albus
MGP_CAROLIEiJ_G0022075	Ercc3	100	99.234	ENSMUSG00000024382	Ercc3	100	99.234	Mus_musculus
MGP_CAROLIEiJ_G0022075	Ercc3	100	99.616	MGP_PahariEiJ_G0018809	Ercc3	100	99.616	Mus_pahari
MGP_CAROLIEiJ_G0022075	Ercc3	100	99.489	MGP_SPRETEiJ_G0022987	Ercc3	100	99.489	Mus_spretus
MGP_CAROLIEiJ_G0022075	Ercc3	100	96.675	ENSMPUG00000012021	ERCC3	100	96.675	Mustela_putorius_furo
MGP_CAROLIEiJ_G0022075	Ercc3	92	90.746	ENSMLUG00000007429	ERCC3	99	90.746	Myotis_lucifugus
MGP_CAROLIEiJ_G0022075	Ercc3	95	97.429	ENSNGAG00000019598	Ercc3	100	97.429	Nannospalax_galili
MGP_CAROLIEiJ_G0022075	Ercc3	100	87.532	ENSNBRG00000019074	ercc3	100	86.896	Neolamprologus_brichardi
MGP_CAROLIEiJ_G0022075	Ercc3	92	94.553	ENSNLEG00000015665	ERCC3	97	94.553	Nomascus_leucogenys
MGP_CAROLIEiJ_G0022075	Ercc3	100	93.223	ENSOPRG00000004553	ERCC3	100	93.223	Ochotona_princeps
MGP_CAROLIEiJ_G0022075	Ercc3	100	96.547	ENSODEG00000005795	ERCC3	100	96.547	Octodon_degus
MGP_CAROLIEiJ_G0022075	Ercc3	100	87.532	ENSONIG00000003255	ercc3	100	86.896	Oreochromis_niloticus
MGP_CAROLIEiJ_G0022075	Ercc3	100	96.164	ENSOCUG00000002248	ERCC3	100	96.164	Oryctolagus_cuniculus
MGP_CAROLIEiJ_G0022075	Ercc3	100	87.532	ENSORLG00000004393	ercc3	100	86.641	Oryzias_latipes
MGP_CAROLIEiJ_G0022075	Ercc3	100	87.405	ENSORLG00020017718	ercc3	100	87.277	Oryzias_latipes_hni
MGP_CAROLIEiJ_G0022075	Ercc3	100	87.277	ENSORLG00015015695	ercc3	100	86.641	Oryzias_latipes_hsok
MGP_CAROLIEiJ_G0022075	Ercc3	100	87.786	ENSOMEG00000015374	ercc3	100	87.150	Oryzias_melastigma
MGP_CAROLIEiJ_G0022075	Ercc3	100	96.811	ENSOGAG00000009103	ERCC3	100	96.811	Otolemur_garnettii
MGP_CAROLIEiJ_G0022075	Ercc3	100	95.780	ENSOARG00000016147	ERCC3	100	95.780	Ovis_aries
MGP_CAROLIEiJ_G0022075	Ercc3	100	96.036	ENSPPAG00000036166	ERCC3	100	96.036	Pan_paniscus
MGP_CAROLIEiJ_G0022075	Ercc3	100	96.419	ENSPPRG00000001305	ERCC3	100	96.419	Panthera_pardus
MGP_CAROLIEiJ_G0022075	Ercc3	92	97.075	ENSPTIG00000016969	ERCC3	100	97.075	Panthera_tigris_altaica
MGP_CAROLIEiJ_G0022075	Ercc3	100	96.036	ENSPTRG00000046940	ERCC3	100	96.036	Pan_troglodytes
MGP_CAROLIEiJ_G0022075	Ercc3	100	96.164	ENSPANG00000007699	ERCC3	100	96.164	Papio_anubis
MGP_CAROLIEiJ_G0022075	Ercc3	100	87.771	ENSPKIG00000001319	ercc3	99	89.007	Paramormyrops_kingsleyae
MGP_CAROLIEiJ_G0022075	Ercc3	92	93.324	ENSPSIG00000014682	ERCC3	100	93.324	Pelodiscus_sinensis
MGP_CAROLIEiJ_G0022075	Ercc3	96	89.920	ENSPMGG00000017885	ercc3	99	88.393	Periophthalmus_magnuspinnatus
MGP_CAROLIEiJ_G0022075	Ercc3	100	98.338	ENSPEMG00000013733	Ercc3	100	98.338	Peromyscus_maniculatus_bairdii
MGP_CAROLIEiJ_G0022075	Ercc3	90	78.881	ENSPMAG00000005081	ercc3	99	78.881	Petromyzon_marinus
MGP_CAROLIEiJ_G0022075	Ercc3	99	95.220	ENSPCIG00000011821	ERCC3	100	94.891	Phascolarctos_cinereus
MGP_CAROLIEiJ_G0022075	Ercc3	96	89.314	ENSPFOG00000015604	ercc3	100	87.913	Poecilia_formosa
MGP_CAROLIEiJ_G0022075	Ercc3	96	86.579	ENSPLAG00000022245	ercc3	100	89.474	Poecilia_latipinna
MGP_CAROLIEiJ_G0022075	Ercc3	96	89.314	ENSPMEG00000016987	ercc3	100	87.913	Poecilia_mexicana
MGP_CAROLIEiJ_G0022075	Ercc3	100	88.422	ENSPREG00000020921	ercc3	100	88.295	Poecilia_reticulata
MGP_CAROLIEiJ_G0022075	Ercc3	100	95.275	ENSPPYG00000012769	ERCC3	100	95.275	Pongo_abelii
MGP_CAROLIEiJ_G0022075	Ercc3	100	97.059	ENSPCOG00000024903	ERCC3	100	97.059	Propithecus_coquereli
MGP_CAROLIEiJ_G0022075	Ercc3	90	94.531	ENSPVAG00000013774	ERCC3	90	94.531	Pteropus_vampyrus
MGP_CAROLIEiJ_G0022075	Ercc3	100	87.532	ENSPNYG00000001208	ercc3	100	86.896	Pundamilia_nyererei
MGP_CAROLIEiJ_G0022075	Ercc3	100	88.280	ENSPNAG00000005748	ercc3	100	87.771	Pygocentrus_nattereri
MGP_CAROLIEiJ_G0022075	Ercc3	100	99.233	ENSRNOG00000013180	Ercc3	100	99.233	Rattus_norvegicus
MGP_CAROLIEiJ_G0022075	Ercc3	100	95.908	ENSRBIG00000027692	ERCC3	100	95.908	Rhinopithecus_bieti
MGP_CAROLIEiJ_G0022075	Ercc3	100	95.908	ENSRROG00000040673	ERCC3	100	95.908	Rhinopithecus_roxellana
MGP_CAROLIEiJ_G0022075	Ercc3	91	56.071	YIL143C	SSL2	85	56.498	Saccharomyces_cerevisiae
MGP_CAROLIEiJ_G0022075	Ercc3	100	95.780	ENSSBOG00000023079	ERCC3	100	95.780	Saimiri_boliviensis_boliviensis
MGP_CAROLIEiJ_G0022075	Ercc3	96	95.225	ENSSHAG00000007423	ERCC3	100	94.381	Sarcophilus_harrisii
MGP_CAROLIEiJ_G0022075	Ercc3	96	88.742	ENSSFOG00015012753	ercc3	100	87.516	Scleropages_formosus
MGP_CAROLIEiJ_G0022075	Ercc3	100	86.548	ENSSMAG00000011915	ercc3	100	85.878	Scophthalmus_maximus
MGP_CAROLIEiJ_G0022075	Ercc3	100	87.786	ENSSDUG00000021181	ercc3	100	87.405	Seriola_dumerili
MGP_CAROLIEiJ_G0022075	Ercc3	100	87.786	ENSSLDG00000008744	ercc3	98	87.405	Seriola_lalandi_dorsalis
MGP_CAROLIEiJ_G0022075	Ercc3	65	76.321	ENSSARG00000000751	-	85	86.143	Sorex_araneus
MGP_CAROLIEiJ_G0022075	Ercc3	90	92.482	ENSSPUG00000015183	ERCC3	91	92.482	Sphenodon_punctatus
MGP_CAROLIEiJ_G0022075	Ercc3	100	88.295	ENSSPAG00000004748	ercc3	100	88.168	Stegastes_partitus
MGP_CAROLIEiJ_G0022075	Ercc3	100	96.292	ENSSSCG00000015721	ERCC3	100	97.280	Sus_scrofa
MGP_CAROLIEiJ_G0022075	Ercc3	99	92.377	ENSTGUG00000004920	-	100	93.152	Taeniopygia_guttata
MGP_CAROLIEiJ_G0022075	Ercc3	100	86.369	ENSTRUG00000017185	ercc3	100	85.860	Takifugu_rubripes
MGP_CAROLIEiJ_G0022075	Ercc3	97	84.404	ENSTNIG00000005457	ercc3	99	86.225	Tetraodon_nigroviridis
MGP_CAROLIEiJ_G0022075	Ercc3	80	96.640	ENSTBEG00000009381	ERCC3	81	96.640	Tupaia_belangeri
MGP_CAROLIEiJ_G0022075	Ercc3	68	97.727	ENSUAMG00000009589	-	100	97.727	Ursus_americanus
MGP_CAROLIEiJ_G0022075	Ercc3	100	95.652	ENSUMAG00000008361	ERCC3	100	95.652	Ursus_maritimus
MGP_CAROLIEiJ_G0022075	Ercc3	92	96.936	ENSVVUG00000010431	ERCC3	100	96.936	Vulpes_vulpes
MGP_CAROLIEiJ_G0022075	Ercc3	100	90.331	ENSXETG00000033646	ercc3	100	90.331	Xenopus_tropicalis
MGP_CAROLIEiJ_G0022075	Ercc3	99	88.402	ENSXCOG00000001791	ercc3	98	89.050	Xiphophorus_couchianus
MGP_CAROLIEiJ_G0022075	Ercc3	100	88.422	ENSXMAG00000003641	ercc3	100	88.295	Xiphophorus_maculatus