EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_CAROLIEiJ_G0022108 (Gene tree)
Gene ID: 110284489
Gene Symbol: Matr3
Alias: 1110061A14Rik|2810017I02Rik|D030046F20Rik
Full Name: matrin 3
Gene Type: protein_coding
Species: Mus_caroli
Status: putative
Strand: Plus strand
Length: 30522 bases
Position: chr18:32826819-32857340
Accession: 110284489
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CAROLIEiJ_P0046324	RRM_5	PF13893.6	8.1e-07	1	2
MGP_CAROLIEiJ_P0046324	RRM_5	PF13893.6	8.1e-07	2	2
MGP_CAROLIEiJ_P0046326	RRM_5	PF13893.6	8.1e-07	1	2
MGP_CAROLIEiJ_P0046326	RRM_5	PF13893.6	8.1e-07	2	2
MGP_CAROLIEiJ_P0046327	RRM_5	PF13893.6	1e-06	1	2
MGP_CAROLIEiJ_P0046327	RRM_5	PF13893.6	1e-06	2	2
MGP_CAROLIEiJ_P0046332	RRM_5	PF13893.6	3.1e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CAROLIEiJ_T0046325	-	1888	-	MGP_CAROLIEiJ_P0046325	91 (aa)	-	UPI000462101A
MGP_CAROLIEiJ_T0046324	-	1846	-	MGP_CAROLIEiJ_P0046324	508 (aa)	-	UPI00001EBF32
MGP_CAROLIEiJ_T0046327	-	1951	-	MGP_CAROLIEiJ_P0046327	558 (aa)	-	UPI00001EBF39
MGP_CAROLIEiJ_T0046326	-	1854	-	MGP_CAROLIEiJ_P0046326	508 (aa)	-	UPI00001EBF32
MGP_CAROLIEiJ_T0046332	-	3853	XM_021150226	MGP_CAROLIEiJ_P0046332	846 (aa)	XP_021005883	UPI00000287F2
MGP_CAROLIEiJ_T0046330	-	1504	-	MGP_CAROLIEiJ_P0046330	385 (aa)	-	UPI00053BD67D
MGP_CAROLIEiJ_T0046323	-	554	-	MGP_CAROLIEiJ_P0046323	33 (aa)	-	UPI00046211BD
MGP_CAROLIEiJ_T0046322	-	762	-	MGP_CAROLIEiJ_P0046322	155 (aa)	-	UPI0004620F73
MGP_CAROLIEiJ_T0046331	-	1791	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0046329	-	778	-	MGP_CAROLIEiJ_P0046329	60 (aa)	-	UPI0004620F40
MGP_CAROLIEiJ_T0046328	-	412	-	MGP_CAROLIEiJ_P0046328	121 (aa)	-	UPI0004621200
MGP_CAROLIEiJ_T0046334	-	1692	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0046333	-	687	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_CAROLIEiJ_G0022108's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CAROLIEiJ_G0022108's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_CAROLIEiJ_G0022108	Matr3	100	98.347	ENSG00000015479	MATR3	100	100.000	Homo_sapiens
MGP_CAROLIEiJ_G0022108	Matr3	99	92.969	ENSAMEG00000011347	-	100	92.969	Ailuropoda_melanoleuca
MGP_CAROLIEiJ_G0022108	Matr3	100	77.644	ENSAPLG00000008118	-	100	75.711	Anas_platyrhynchos
MGP_CAROLIEiJ_G0022108	Matr3	99	71.719	ENSACAG00000016233	-	99	70.370	Anolis_carolinensis
MGP_CAROLIEiJ_G0022108	Matr3	100	97.993	ENSANAG00000022951	-	100	97.993	Aotus_nancymaae
MGP_CAROLIEiJ_G0022108	Matr3	76	72.205	ENSANAG00000024654	-	99	72.205	Aotus_nancymaae
MGP_CAROLIEiJ_G0022108	Matr3	53	57.143	ENSACLG00000015903	matr3l1.1	62	57.143	Astatotilapia_calliptera
MGP_CAROLIEiJ_G0022108	Matr3	95	33.484	ENSAMXG00000010681	matr3l1.1	77	34.132	Astyanax_mexicanus
MGP_CAROLIEiJ_G0022108	Matr3	94	30.317	ENSAMXG00000010685	matr3l1.1	86	30.377	Astyanax_mexicanus
MGP_CAROLIEiJ_G0022108	Matr3	93	92.399	ENSBTAG00000006756	MATR3	99	92.399	Bos_taurus
MGP_CAROLIEiJ_G0022108	Matr3	100	97.053	ENSCJAG00000006888	-	100	96.601	Callithrix_jacchus
MGP_CAROLIEiJ_G0022108	Matr3	100	97.644	ENSCAFG00000001345	MATR3	100	97.644	Canis_familiaris
MGP_CAROLIEiJ_G0022108	Matr3	99	95.775	ENSCAFG00020010504	-	98	97.775	Canis_lupus_dingo
MGP_CAROLIEiJ_G0022108	Matr3	100	98.115	ENSCHIG00000025746	-	100	98.115	Capra_hircus
MGP_CAROLIEiJ_G0022108	Matr3	100	98.229	ENSTSYG00000011028	-	100	98.229	Carlito_syrichta
MGP_CAROLIEiJ_G0022108	Matr3	99	97.991	ENSCPOG00000014076	-	99	97.991	Cavia_porcellus
MGP_CAROLIEiJ_G0022108	Matr3	100	98.229	ENSCCAG00000025074	-	100	98.229	Cebus_capucinus
MGP_CAROLIEiJ_G0022108	Matr3	100	97.839	ENSCATG00000041304	-	100	97.138	Cercocebus_atys
MGP_CAROLIEiJ_G0022108	Matr3	99	98.227	ENSCLAG00000015998	-	99	98.227	Chinchilla_lanigera
MGP_CAROLIEiJ_G0022108	Matr3	100	98.465	ENSCSAG00000013075	-	100	98.465	Chlorocebus_sabaeus
MGP_CAROLIEiJ_G0022108	Matr3	100	76.013	ENSCPBG00000006303	-	100	75.219	Chrysemys_picta_bellii
MGP_CAROLIEiJ_G0022108	Matr3	100	97.048	ENSCANG00000028224	-	100	97.048	Colobus_angolensis_palliatus
MGP_CAROLIEiJ_G0022108	Matr3	100	98.937	ENSCGRG00001020227	Matr3	100	98.937	Cricetulus_griseus_chok1gshd
MGP_CAROLIEiJ_G0022108	Matr3	100	98.819	ENSCGRG00000011298	Matr3	100	98.819	Cricetulus_griseus_crigri
MGP_CAROLIEiJ_G0022108	Matr3	99	32.143	ENSCSEG00000012682	matr3l1.1	93	32.143	Cynoglossus_semilaevis
MGP_CAROLIEiJ_G0022108	Matr3	79	47.692	ENSCVAG00000005337	matr3l1.1	83	30.921	Cyprinodon_variegatus
MGP_CAROLIEiJ_G0022108	Matr3	100	92.650	ENSDNOG00000037723	-	100	92.650	Dasypus_novemcinctus
MGP_CAROLIEiJ_G0022108	Matr3	100	98.115	ENSEASG00005020857	-	100	98.115	Equus_asinus_asinus
MGP_CAROLIEiJ_G0022108	Matr3	100	98.115	ENSECAG00000012882	MATR3	100	98.115	Equus_caballus
MGP_CAROLIEiJ_G0022108	Matr3	75	42.718	ENSELUG00000021651	si:ch211-271b14.1	82	42.718	Esox_lucius
MGP_CAROLIEiJ_G0022108	Matr3	94	30.837	ENSELUG00000021848	matr3l1.1	66	51.515	Esox_lucius
MGP_CAROLIEiJ_G0022108	Matr3	100	97.998	ENSFCAG00000021911	-	100	97.998	Felis_catus
MGP_CAROLIEiJ_G0022108	Matr3	100	75.930	ENSFALG00000003071	-	100	75.219	Ficedula_albicollis
MGP_CAROLIEiJ_G0022108	Matr3	100	97.166	ENSFDAG00000017675	-	100	97.166	Fukomys_damarensis
MGP_CAROLIEiJ_G0022108	Matr3	100	76.999	ENSGALG00000002478	MATR3	100	73.713	Gallus_gallus
MGP_CAROLIEiJ_G0022108	Matr3	100	75.847	ENSGAGG00000011386	-	100	75.219	Gopherus_agassizii
MGP_CAROLIEiJ_G0022108	Matr3	100	98.465	ENSGGOG00000007308	-	100	98.465	Gorilla_gorilla
MGP_CAROLIEiJ_G0022108	Matr3	100	98.347	ENSHGLG00000004673	MATR3	100	98.347	Heterocephalus_glaber_female
MGP_CAROLIEiJ_G0022108	Matr3	100	97.446	ENSHGLG00100006442	-	100	97.446	Heterocephalus_glaber_male
MGP_CAROLIEiJ_G0022108	Matr3	57	37.222	ENSHCOG00000013223	matr3l1.1	84	30.562	Hippocampus_comes
MGP_CAROLIEiJ_G0022108	Matr3	50	54.930	ENSIPUG00000020686	MATR3	86	55.714	Ictalurus_punctatus
MGP_CAROLIEiJ_G0022108	Matr3	100	98.115	ENSSTOG00000014746	-	100	98.115	Ictidomys_tridecemlineatus
MGP_CAROLIEiJ_G0022108	Matr3	100	69.276	ENSJJAG00000011022	-	100	69.472	Jaculus_jaculus
MGP_CAROLIEiJ_G0022108	Matr3	100	97.403	ENSJJAG00000021710	-	100	97.403	Jaculus_jaculus
MGP_CAROLIEiJ_G0022108	Matr3	63	43.210	ENSLBEG00000018267	matr3l1.1	69	53.704	Labrus_bergylta
MGP_CAROLIEiJ_G0022108	Matr3	99	56.026	ENSLACG00000006743	-	99	57.003	Latimeria_chalumnae
MGP_CAROLIEiJ_G0022108	Matr3	100	98.035	ENSMFAG00000000634	-	100	97.317	Macaca_fascicularis
MGP_CAROLIEiJ_G0022108	Matr3	100	98.035	ENSMMUG00000016741	MATR3	99	98.359	Macaca_mulatta
MGP_CAROLIEiJ_G0022108	Matr3	59	96.819	ENSMMUG00000015963	-	98	96.819	Macaca_mulatta
MGP_CAROLIEiJ_G0022108	Matr3	100	98.583	ENSMNEG00000042856	-	100	98.583	Macaca_nemestrina
MGP_CAROLIEiJ_G0022108	Matr3	100	98.583	ENSMLEG00000041178	-	100	98.583	Mandrillus_leucophaeus
MGP_CAROLIEiJ_G0022108	Matr3	72	55.556	ENSMAMG00000013840	matr3l1.1	78	36.905	Mastacembelus_armatus
MGP_CAROLIEiJ_G0022108	Matr3	100	76.889	ENSMGAG00000001331	-	100	75.110	Meleagris_gallopavo
MGP_CAROLIEiJ_G0022108	Matr3	100	98.819	ENSMAUG00000011647	Matr3	100	98.819	Mesocricetus_auratus
MGP_CAROLIEiJ_G0022108	Matr3	98	97.183	ENSMICG00000012438	-	99	96.813	Microcebus_murinus
MGP_CAROLIEiJ_G0022108	Matr3	100	98.701	ENSMOCG00000015711	Matr3	100	98.701	Microtus_ochrogaster
MGP_CAROLIEiJ_G0022108	Matr3	100	90.749	ENSMODG00000011925	-	99	90.164	Monodelphis_domestica
MGP_CAROLIEiJ_G0022108	Matr3	100	100.000	ENSMUSG00000037236	Matr3	100	100.000	Mus_musculus
MGP_CAROLIEiJ_G0022108	Matr3	100	99.528	MGP_PahariEiJ_G0018842	Matr3	100	99.528	Mus_pahari
MGP_CAROLIEiJ_G0022108	Matr3	100	99.645	MGP_SPRETEiJ_G0023020	Matr3	100	99.645	Mus_spretus
MGP_CAROLIEiJ_G0022108	Matr3	100	96.412	ENSMPUG00000009297	-	100	96.412	Mustela_putorius_furo
MGP_CAROLIEiJ_G0022108	Matr3	100	97.176	ENSMLUG00000005798	-	99	97.176	Myotis_lucifugus
MGP_CAROLIEiJ_G0022108	Matr3	100	98.819	ENSNGAG00000017452	Matr3	100	98.819	Nannospalax_galili
MGP_CAROLIEiJ_G0022108	Matr3	100	98.583	ENSNLEG00000009093	-	100	98.583	Nomascus_leucogenys
MGP_CAROLIEiJ_G0022108	Matr3	99	90.621	ENSOPRG00000016511	-	100	90.621	Ochotona_princeps
MGP_CAROLIEiJ_G0022108	Matr3	99	97.872	ENSODEG00000003015	-	99	97.872	Octodon_degus
MGP_CAROLIEiJ_G0022108	Matr3	100	98.229	ENSOCUG00000026311	MATR3	100	98.229	Oryctolagus_cuniculus
MGP_CAROLIEiJ_G0022108	Matr3	51	48.148	ENSORLG00000025674	matr3l1.1	80	33.333	Oryzias_latipes
MGP_CAROLIEiJ_G0022108	Matr3	70	37.879	ENSORLG00020009362	matr3l1.1	80	33.333	Oryzias_latipes_hni
MGP_CAROLIEiJ_G0022108	Matr3	63	48.148	ENSORLG00015018551	matr3l1.1	81	33.333	Oryzias_latipes_hsok
MGP_CAROLIEiJ_G0022108	Matr3	68	40.351	ENSOMEG00000022287	matr3l1.1	91	37.984	Oryzias_melastigma
MGP_CAROLIEiJ_G0022108	Matr3	100	98.701	ENSOGAG00000010607	-	100	98.701	Otolemur_garnettii
MGP_CAROLIEiJ_G0022108	Matr3	100	98.115	ENSOARG00000016931	-	99	98.115	Ovis_aries
MGP_CAROLIEiJ_G0022108	Matr3	100	97.839	ENSPPAG00000001418	-	100	97.317	Pan_paniscus
MGP_CAROLIEiJ_G0022108	Matr3	100	91.749	ENSPPAG00000026720	-	99	92.322	Pan_paniscus
MGP_CAROLIEiJ_G0022108	Matr3	100	98.115	ENSPPRG00000008004	-	100	98.115	Panthera_pardus
MGP_CAROLIEiJ_G0022108	Matr3	100	97.065	ENSPTIG00000010711	-	100	98.030	Panthera_tigris_altaica
MGP_CAROLIEiJ_G0022108	Matr3	100	97.839	ENSPTRG00000017294	MATR3	100	97.317	Pan_troglodytes
MGP_CAROLIEiJ_G0022108	Matr3	100	98.035	ENSPANG00000012018	-	100	97.317	Papio_anubis
MGP_CAROLIEiJ_G0022108	Matr3	100	97.839	ENSPANG00000032489	-	99	97.810	Papio_anubis
MGP_CAROLIEiJ_G0022108	Matr3	97	34.426	ENSPKIG00000000333	matr3l1.1	77	34.137	Paramormyrops_kingsleyae
MGP_CAROLIEiJ_G0022108	Matr3	100	76.368	ENSPSIG00000014598	-	100	74.890	Pelodiscus_sinensis
MGP_CAROLIEiJ_G0022108	Matr3	100	98.347	ENSPEMG00000020679	Matr3	100	98.347	Peromyscus_maniculatus_bairdii
MGP_CAROLIEiJ_G0022108	Matr3	100	93.296	ENSPPYG00000015835	-	100	93.296	Pongo_abelii
MGP_CAROLIEiJ_G0022108	Matr3	100	98.465	ENSPCOG00000025718	-	100	98.465	Propithecus_coquereli
MGP_CAROLIEiJ_G0022108	Matr3	98	93.402	ENSPVAG00000015431	-	100	93.402	Pteropus_vampyrus
MGP_CAROLIEiJ_G0022108	Matr3	58	46.512	ENSPNYG00000015855	-	78	57.143	Pundamilia_nyererei
MGP_CAROLIEiJ_G0022108	Matr3	65	50.633	ENSPNAG00000030007	si:ch211-271b14.1	56	50.633	Pygocentrus_nattereri
MGP_CAROLIEiJ_G0022108	Matr3	100	99.174	ENSRNOG00000019875	Matr3	100	99.174	Rattus_norvegicus
MGP_CAROLIEiJ_G0022108	Matr3	100	98.035	ENSRBIG00000034713	-	100	97.317	Rhinopithecus_bieti
MGP_CAROLIEiJ_G0022108	Matr3	100	97.053	ENSRROG00000043949	-	100	96.930	Rhinopithecus_roxellana
MGP_CAROLIEiJ_G0022108	Matr3	100	98.035	ENSRROG00000039415	-	100	98.035	Rhinopithecus_roxellana
MGP_CAROLIEiJ_G0022108	Matr3	100	98.111	ENSSBOG00000030159	-	100	98.111	Saimiri_boliviensis_boliviensis
MGP_CAROLIEiJ_G0022108	Matr3	100	90.867	ENSSHAG00000010331	-	99	90.281	Sarcophilus_harrisii
MGP_CAROLIEiJ_G0022108	Matr3	62	55.556	ENSSDUG00000015369	matr3l1.1	79	35.714	Seriola_dumerili
MGP_CAROLIEiJ_G0022108	Matr3	99	75.383	ENSSPUG00000019236	-	99	74.697	Sphenodon_punctatus
MGP_CAROLIEiJ_G0022108	Matr3	100	98.469	ENSSSCG00000014343	-	100	98.469	Sus_scrofa
MGP_CAROLIEiJ_G0022108	Matr3	99	76.780	ENSTGUG00000014568	MATR3	99	75.439	Taeniopygia_guttata
MGP_CAROLIEiJ_G0022108	Matr3	53	37.327	ENSTRUG00000001692	-	68	35.317	Takifugu_rubripes
MGP_CAROLIEiJ_G0022108	Matr3	86	39.247	ENSTNIG00000003166	matr3l1.1	88	57.143	Tetraodon_nigroviridis
MGP_CAROLIEiJ_G0022108	Matr3	85	97.914	ENSUAMG00000000097	-	97	97.914	Ursus_americanus
MGP_CAROLIEiJ_G0022108	Matr3	100	97.527	ENSUMAG00000015808	-	100	97.527	Ursus_maritimus
MGP_CAROLIEiJ_G0022108	Matr3	100	92.325	ENSVPAG00000006337	-	100	92.325	Vicugna_pacos
MGP_CAROLIEiJ_G0022108	Matr3	100	97.880	ENSVVUG00000020287	-	100	97.880	Vulpes_vulpes
MGP_CAROLIEiJ_G0022108	Matr3	100	52.563	ENSXETG00000003838	matr3	100	51.641	Xenopus_tropicalis