EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_CAROLIEiJ_G0022271 (Gene tree)
Gene ID: 110284807
Gene Symbol: Srfbp1
Alias: 2810036K01Rik
Full Name: serum response factor binding protein 1
Gene Type: protein_coding
Species: Mus_caroli
Status: putative
Strand: Plus strand
Length: 25517 bases
Position: chr18:49400901-49426417
Accession: 110284807
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CAROLIEiJ_P0046730	BUD22	PF09073.10	5.9e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CAROLIEiJ_T0046730	-	1451	-	MGP_CAROLIEiJ_P0046730	437 (aa)	XP_021006375	UPI000A317151

Gene Model

Click here to download MGP_CAROLIEiJ_G0022271's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CAROLIEiJ_G0022271's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_CAROLIEiJ_G0022271	Srfbp1	98	69.070	ENSG00000151304	SRFBP1	100	68.837	Homo_sapiens
MGP_CAROLIEiJ_G0022271	Srfbp1	97	66.432	ENSAMEG00000018050	SRFBP1	99	66.432	Ailuropoda_melanoleuca
MGP_CAROLIEiJ_G0022271	Srfbp1	97	39.498	ENSACIG00000019127	-	99	40.183	Amphilophus_citrinellus
MGP_CAROLIEiJ_G0022271	Srfbp1	98	43.946	ENSACAG00000003779	SRFBP1	100	43.722	Anolis_carolinensis
MGP_CAROLIEiJ_G0022271	Srfbp1	98	66.047	ENSANAG00000022485	SRFBP1	100	66.047	Aotus_nancymaae
MGP_CAROLIEiJ_G0022271	Srfbp1	97	37.525	ENSACLG00000013909	-	90	37.476	Astatotilapia_calliptera
MGP_CAROLIEiJ_G0022271	Srfbp1	98	62.387	ENSBTAG00000014320	SRFBP1	100	65.035	Bos_taurus
MGP_CAROLIEiJ_G0022271	Srfbp1	98	67.442	ENSCJAG00000017177	SRFBP1	100	67.442	Callithrix_jacchus
MGP_CAROLIEiJ_G0022271	Srfbp1	98	67.667	ENSCAFG00000000512	SRFBP1	100	67.667	Canis_familiaris
MGP_CAROLIEiJ_G0022271	Srfbp1	98	67.667	ENSCAFG00020009389	SRFBP1	100	67.667	Canis_lupus_dingo
MGP_CAROLIEiJ_G0022271	Srfbp1	95	47.711	ENSTSYG00000006869	-	99	47.711	Carlito_syrichta
MGP_CAROLIEiJ_G0022271	Srfbp1	97	65.493	ENSTSYG00000008630	-	99	65.493	Carlito_syrichta
MGP_CAROLIEiJ_G0022271	Srfbp1	98	64.203	ENSCPOG00000004695	SRFBP1	100	63.616	Cavia_porcellus
MGP_CAROLIEiJ_G0022271	Srfbp1	98	67.442	ENSCCAG00000032237	-	100	67.209	Cebus_capucinus
MGP_CAROLIEiJ_G0022271	Srfbp1	98	69.070	ENSCATG00000040904	SRFBP1	100	69.070	Cercocebus_atys
MGP_CAROLIEiJ_G0022271	Srfbp1	98	64.516	ENSCLAG00000003630	SRFBP1	100	65.278	Chinchilla_lanigera
MGP_CAROLIEiJ_G0022271	Srfbp1	98	66.047	ENSCSAG00000014636	SRFBP1	100	67.981	Chlorocebus_sabaeus
MGP_CAROLIEiJ_G0022271	Srfbp1	98	68.837	ENSCANG00000041298	SRFBP1	100	68.837	Colobus_angolensis_palliatus
MGP_CAROLIEiJ_G0022271	Srfbp1	100	79.318	ENSCGRG00001000718	Srfbp1	100	79.318	Cricetulus_griseus_chok1gshd
MGP_CAROLIEiJ_G0022271	Srfbp1	94	77.831	ENSCGRG00000010837	Srfbp1	100	77.831	Cricetulus_griseus_crigri
MGP_CAROLIEiJ_G0022271	Srfbp1	71	77.143	ENSCSEG00000011789	-	79	61.600	Cynoglossus_semilaevis
MGP_CAROLIEiJ_G0022271	Srfbp1	96	39.953	ENSCVAG00000013010	-	97	40.371	Cyprinodon_variegatus
MGP_CAROLIEiJ_G0022271	Srfbp1	77	59.475	ENSDNOG00000017733	SRFBP1	100	58.892	Dasypus_novemcinctus
MGP_CAROLIEiJ_G0022271	Srfbp1	77	53.550	ENSETEG00000012408	SRFBP1	100	53.982	Echinops_telfairi
MGP_CAROLIEiJ_G0022271	Srfbp1	71	46.154	ENSEBUG00000007806	SRFBP1	58	46.154	Eptatretus_burgeri
MGP_CAROLIEiJ_G0022271	Srfbp1	98	68.765	ENSEASG00005012421	SRFBP1	100	68.531	Equus_asinus_asinus
MGP_CAROLIEiJ_G0022271	Srfbp1	98	68.065	ENSECAG00000015330	SRFBP1	100	67.832	Equus_caballus
MGP_CAROLIEiJ_G0022271	Srfbp1	98	57.968	ENSEEUG00000011514	SRFBP1	100	57.968	Erinaceus_europaeus
MGP_CAROLIEiJ_G0022271	Srfbp1	99	36.989	ENSELUG00000018381	-	99	37.421	Esox_lucius
MGP_CAROLIEiJ_G0022271	Srfbp1	98	66.821	ENSFCAG00000035118	SRFBP1	100	67.593	Felis_catus
MGP_CAROLIEiJ_G0022271	Srfbp1	94	42.326	ENSFALG00000007595	SRFBP1	100	43.224	Ficedula_albicollis
MGP_CAROLIEiJ_G0022271	Srfbp1	98	62.615	ENSFDAG00000005102	SRFBP1	100	63.341	Fukomys_damarensis
MGP_CAROLIEiJ_G0022271	Srfbp1	76	69.048	ENSFHEG00000000477	-	87	37.037	Fundulus_heteroclitus
MGP_CAROLIEiJ_G0022271	Srfbp1	69	59.483	ENSGMOG00000012729	-	85	36.830	Gadus_morhua
MGP_CAROLIEiJ_G0022271	Srfbp1	97	42.361	ENSGALG00000005316	SRFBP1	99	38.961	Gallus_gallus
MGP_CAROLIEiJ_G0022271	Srfbp1	96	38.604	ENSGAFG00000018777	-	87	35.872	Gambusia_affinis
MGP_CAROLIEiJ_G0022271	Srfbp1	99	40.136	ENSGACG00000009055	-	85	40.181	Gasterosteus_aculeatus
MGP_CAROLIEiJ_G0022271	Srfbp1	94	44.393	ENSGAGG00000024915	SRFBP1	99	44.419	Gopherus_agassizii
MGP_CAROLIEiJ_G0022271	Srfbp1	98	69.302	ENSGGOG00000007725	SRFBP1	100	69.070	Gorilla_gorilla
MGP_CAROLIEiJ_G0022271	Srfbp1	99	67.123	ENSSTOG00000029184	SRFBP1	99	67.123	Ictidomys_tridecemlineatus
MGP_CAROLIEiJ_G0022271	Srfbp1	94	63.373	ENSJJAG00000013229	Srfbp1	100	62.892	Jaculus_jaculus
MGP_CAROLIEiJ_G0022271	Srfbp1	65	43.667	ENSLBEG00000013924	-	97	37.421	Labrus_bergylta
MGP_CAROLIEiJ_G0022271	Srfbp1	77	36.164	ENSLACG00000004456	SRFBP1	100	36.438	Latimeria_chalumnae
MGP_CAROLIEiJ_G0022271	Srfbp1	98	42.424	ENSLOCG00000008772	SRFBP1	100	41.703	Lepisosteus_oculatus
MGP_CAROLIEiJ_G0022271	Srfbp1	99	64.773	ENSLAFG00000015303	SRFBP1	100	64.545	Loxodonta_africana
MGP_CAROLIEiJ_G0022271	Srfbp1	98	68.837	ENSMFAG00000031263	SRFBP1	100	68.837	Macaca_fascicularis
MGP_CAROLIEiJ_G0022271	Srfbp1	98	69.070	ENSMMUG00000021009	SRFBP1	100	69.070	Macaca_mulatta
MGP_CAROLIEiJ_G0022271	Srfbp1	98	68.837	ENSMNEG00000040870	SRFBP1	100	68.837	Macaca_nemestrina
MGP_CAROLIEiJ_G0022271	Srfbp1	77	67.442	ENSMAMG00000004632	-	88	36.072	Mastacembelus_armatus
MGP_CAROLIEiJ_G0022271	Srfbp1	97	38.866	ENSMZEG00005000432	-	90	38.189	Maylandia_zebra
MGP_CAROLIEiJ_G0022271	Srfbp1	100	76.310	ENSMAUG00000009431	Srfbp1	100	76.310	Mesocricetus_auratus
MGP_CAROLIEiJ_G0022271	Srfbp1	98	69.515	ENSMICG00000042923	SRFBP1	100	69.515	Microcebus_murinus
MGP_CAROLIEiJ_G0022271	Srfbp1	100	76.818	ENSMOCG00000006206	Srfbp1	100	75.682	Microtus_ochrogaster
MGP_CAROLIEiJ_G0022271	Srfbp1	98	54.897	ENSMODG00000013487	-	99	54.897	Monodelphis_domestica
MGP_CAROLIEiJ_G0022271	Srfbp1	86	75.000	ENSMALG00000001812	-	72	76.667	Monopterus_albus
MGP_CAROLIEiJ_G0022271	Srfbp1	100	94.558	ENSMUSG00000024528	Srfbp1	100	94.558	Mus_musculus
MGP_CAROLIEiJ_G0022271	Srfbp1	100	92.308	MGP_PahariEiJ_G0019004	Srfbp1	100	92.308	Mus_pahari
MGP_CAROLIEiJ_G0022271	Srfbp1	100	95.011	MGP_SPRETEiJ_G0023184	Srfbp1	100	95.011	Mus_spretus
MGP_CAROLIEiJ_G0022271	Srfbp1	94	67.312	ENSMPUG00000013031	SRFBP1	100	66.507	Mustela_putorius_furo
MGP_CAROLIEiJ_G0022271	Srfbp1	97	64.419	ENSMLUG00000009984	SRFBP1	100	64.419	Myotis_lucifugus
MGP_CAROLIEiJ_G0022271	Srfbp1	99	64.828	ENSNGAG00000013229	Srfbp1	99	64.828	Nannospalax_galili
MGP_CAROLIEiJ_G0022271	Srfbp1	97	41.611	ENSNBRG00000001146	-	98	40.089	Neolamprologus_brichardi
MGP_CAROLIEiJ_G0022271	Srfbp1	98	68.765	ENSNLEG00000011949	SRFBP1	100	68.531	Nomascus_leucogenys
MGP_CAROLIEiJ_G0022271	Srfbp1	65	66.667	ENSOPRG00000003881	-	81	66.667	Ochotona_princeps
MGP_CAROLIEiJ_G0022271	Srfbp1	94	60.621	ENSODEG00000007258	SRFBP1	100	61.098	Octodon_degus
MGP_CAROLIEiJ_G0022271	Srfbp1	83	48.148	ENSOANG00000010042	-	98	48.148	Ornithorhynchus_anatinus
MGP_CAROLIEiJ_G0022271	Srfbp1	99	67.946	ENSOCUG00000009556	SRFBP1	99	67.946	Oryctolagus_cuniculus
MGP_CAROLIEiJ_G0022271	Srfbp1	97	37.143	ENSORLG00000014234	-	88	37.372	Oryzias_latipes
MGP_CAROLIEiJ_G0022271	Srfbp1	97	65.187	ENSOGAG00000032423	SRFBP1	100	64.953	Otolemur_garnettii
MGP_CAROLIEiJ_G0022271	Srfbp1	98	68.605	ENSPPAG00000035848	SRFBP1	100	68.372	Pan_paniscus
MGP_CAROLIEiJ_G0022271	Srfbp1	98	67.832	ENSPPRG00000001695	SRFBP1	100	67.361	Panthera_pardus
MGP_CAROLIEiJ_G0022271	Srfbp1	98	67.599	ENSPTIG00000012305	SRFBP1	100	67.130	Panthera_tigris_altaica
MGP_CAROLIEiJ_G0022271	Srfbp1	98	68.837	ENSPTRG00000017172	SRFBP1	100	68.605	Pan_troglodytes
MGP_CAROLIEiJ_G0022271	Srfbp1	98	68.765	ENSPANG00000003799	SRFBP1	100	68.056	Papio_anubis
MGP_CAROLIEiJ_G0022271	Srfbp1	97	34.706	ENSPKIG00000024291	-	72	53.333	Paramormyrops_kingsleyae
MGP_CAROLIEiJ_G0022271	Srfbp1	98	45.089	ENSPSIG00000010650	SRFBP1	99	44.866	Pelodiscus_sinensis
MGP_CAROLIEiJ_G0022271	Srfbp1	98	55.402	ENSPCIG00000028532	SRFBP1	94	55.402	Phascolarctos_cinereus
MGP_CAROLIEiJ_G0022271	Srfbp1	97	41.741	ENSPFOG00000005272	-	87	41.150	Poecilia_formosa
MGP_CAROLIEiJ_G0022271	Srfbp1	90	62.745	ENSPMEG00000020184	-	88	37.219	Poecilia_mexicana
MGP_CAROLIEiJ_G0022271	Srfbp1	96	42.166	ENSPREG00000017248	-	98	41.230	Poecilia_reticulata
MGP_CAROLIEiJ_G0022271	Srfbp1	98	68.605	ENSPPYG00000015714	SRFBP1	100	68.372	Pongo_abelii
MGP_CAROLIEiJ_G0022271	Srfbp1	98	68.822	ENSPCOG00000027331	SRFBP1	100	68.822	Propithecus_coquereli
MGP_CAROLIEiJ_G0022271	Srfbp1	57	83.766	ENSPVAG00000017512	-	58	83.766	Pteropus_vampyrus
MGP_CAROLIEiJ_G0022271	Srfbp1	97	39.059	ENSPNYG00000010355	-	99	41.218	Pundamilia_nyererei
MGP_CAROLIEiJ_G0022271	Srfbp1	70	52.985	ENSPNAG00000029666	srfbp1	78	45.732	Pygocentrus_nattereri
MGP_CAROLIEiJ_G0022271	Srfbp1	100	82.579	ENSRNOG00000014808	Srfbp1	100	82.579	Rattus_norvegicus
MGP_CAROLIEiJ_G0022271	Srfbp1	95	64.439	ENSRBIG00000031064	SRFBP1	99	64.439	Rhinopithecus_bieti
MGP_CAROLIEiJ_G0022271	Srfbp1	98	69.070	ENSRROG00000026932	SRFBP1	100	69.070	Rhinopithecus_roxellana
MGP_CAROLIEiJ_G0022271	Srfbp1	98	67.442	ENSSBOG00000015464	-	99	67.442	Saimiri_boliviensis_boliviensis
MGP_CAROLIEiJ_G0022271	Srfbp1	98	56.092	ENSSHAG00000016003	SRFBP1	99	56.092	Sarcophilus_harrisii
MGP_CAROLIEiJ_G0022271	Srfbp1	97	38.866	ENSSFOG00015001274	srfbp1	99	39.076	Scleropages_formosus
MGP_CAROLIEiJ_G0022271	Srfbp1	70	65.600	ENSSMAG00000020630	-	59	65.600	Scophthalmus_maximus
MGP_CAROLIEiJ_G0022271	Srfbp1	99	36.680	ENSSDUG00000001828	-	61	61.654	Seriola_dumerili
MGP_CAROLIEiJ_G0022271	Srfbp1	98	65.127	ENSSARG00000010669	SRFBP1	100	66.513	Sorex_araneus
MGP_CAROLIEiJ_G0022271	Srfbp1	95	42.534	ENSSPUG00000009204	SRFBP1	99	42.534	Sphenodon_punctatus
MGP_CAROLIEiJ_G0022271	Srfbp1	83	43.333	ENSSPAG00000010728	-	71	59.615	Stegastes_partitus
MGP_CAROLIEiJ_G0022271	Srfbp1	98	66.744	ENSSSCG00000022656	SRFBP1	100	66.744	Sus_scrofa
MGP_CAROLIEiJ_G0022271	Srfbp1	99	41.892	ENSTNIG00000009267	-	99	43.624	Tetraodon_nigroviridis
MGP_CAROLIEiJ_G0022271	Srfbp1	74	71.698	ENSTTRG00000007726	SRFBP1	77	72.038	Tursiops_truncatus
MGP_CAROLIEiJ_G0022271	Srfbp1	94	69.324	ENSUAMG00000016707	SRFBP1	100	68.421	Ursus_americanus
MGP_CAROLIEiJ_G0022271	Srfbp1	95	68.675	ENSUMAG00000018340	SRFBP1	100	65.394	Ursus_maritimus
MGP_CAROLIEiJ_G0022271	Srfbp1	98	67.056	ENSVPAG00000005714	SRFBP1	100	66.821	Vicugna_pacos
MGP_CAROLIEiJ_G0022271	Srfbp1	98	67.436	ENSVVUG00000019178	SRFBP1	100	66.975	Vulpes_vulpes
MGP_CAROLIEiJ_G0022271	Srfbp1	97	43.177	ENSXETG00000004681	srfbp1	99	43.177	Xenopus_tropicalis
MGP_CAROLIEiJ_G0022271	Srfbp1	97	38.900	ENSXCOG00000003410	-	99	37.008	Xiphophorus_couchianus
MGP_CAROLIEiJ_G0022271	Srfbp1	96	39.212	ENSXMAG00000026251	-	86	36.273	Xiphophorus_maculatus