EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_CAROLIEiJ_G0022463 (Gene tree)
Gene ID: 110285651
Gene Symbol: Ighmbp2
Alias: AEP|Catf1|RIPE3b1|Smbp-2|Smbp2|Smubp2|p110 subunit|sma
Full Name: immunoglobulin mu DNA binding protein 2
Gene Type: protein_coding
Species: Mus_caroli
Status: putative
Strand: Minus strand
Length: 23084 bases
Position: chr19:8542-31625
Accession: 110285651
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CAROLIEiJ_P0047322	R3H	PF01424.22	6.5e-13	1	1
MGP_CAROLIEiJ_P0047322	ResIII	PF04851.15	8.8e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CAROLIEiJ_T0047324	-	733	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0047322	-	2979	-	MGP_CAROLIEiJ_P0047322	992 (aa)	XP_021007630	UPI000A317F4C
MGP_CAROLIEiJ_T0047323	-	2712	-	MGP_CAROLIEiJ_P0047323	253 (aa)	-	-

Gene Model

Click here to download MGP_CAROLIEiJ_G0022463's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CAROLIEiJ_G0022463's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_CAROLIEiJ_G0022463	Ighmbp2	100	77.168	ENSG00000132740	IGHMBP2	100	86.207	Homo_sapiens
MGP_CAROLIEiJ_G0022463	Ighmbp2	99	58.541	ENSAPOG00000009399	ighmbp2	99	58.193	Acanthochromis_polyacanthus
MGP_CAROLIEiJ_G0022463	Ighmbp2	99	75.556	ENSAMEG00000008568	IGHMBP2	100	74.300	Ailuropoda_melanoleuca
MGP_CAROLIEiJ_G0022463	Ighmbp2	99	58.569	ENSACIG00000004670	ighmbp2	99	57.889	Amphilophus_citrinellus
MGP_CAROLIEiJ_G0022463	Ighmbp2	99	58.093	ENSAOCG00000019390	ighmbp2	99	57.708	Amphiprion_ocellaris
MGP_CAROLIEiJ_G0022463	Ighmbp2	99	58.391	ENSAPEG00000021713	ighmbp2	99	58.004	Amphiprion_percula
MGP_CAROLIEiJ_G0022463	Ighmbp2	99	58.748	ENSATEG00000010246	ighmbp2	96	58.631	Anabas_testudineus
MGP_CAROLIEiJ_G0022463	Ighmbp2	96	64.110	ENSAPLG00000003251	IGHMBP2	100	64.074	Anas_platyrhynchos
MGP_CAROLIEiJ_G0022463	Ighmbp2	99	61.019	ENSACAG00000013702	IGHMBP2	99	60.728	Anolis_carolinensis
MGP_CAROLIEiJ_G0022463	Ighmbp2	100	76.564	ENSANAG00000027309	IGHMBP2	100	76.128	Aotus_nancymaae
MGP_CAROLIEiJ_G0022463	Ighmbp2	99	58.100	ENSACLG00000014140	ighmbp2	99	58.242	Astatotilapia_calliptera
MGP_CAROLIEiJ_G0022463	Ighmbp2	99	57.734	ENSAMXG00000000503	ighmbp2	99	57.340	Astyanax_mexicanus
MGP_CAROLIEiJ_G0022463	Ighmbp2	99	72.935	ENSBTAG00000022185	IGHMBP2	99	72.500	Bos_taurus
MGP_CAROLIEiJ_G0022463	Ighmbp2	100	74.902	ENSCJAG00000015887	IGHMBP2	93	74.853	Callithrix_jacchus
MGP_CAROLIEiJ_G0022463	Ighmbp2	99	74.648	ENSCAFG00000010745	IGHMBP2	100	73.952	Canis_familiaris
MGP_CAROLIEiJ_G0022463	Ighmbp2	69	69.553	ENSCAFG00020015362	IGHMBP2	89	68.638	Canis_lupus_dingo
MGP_CAROLIEiJ_G0022463	Ighmbp2	99	73.769	ENSCHIG00000011703	IGHMBP2	99	72.627	Capra_hircus
MGP_CAROLIEiJ_G0022463	Ighmbp2	98	77.222	ENSCAPG00000001471	IGHMBP2	99	76.098	Cavia_aperea
MGP_CAROLIEiJ_G0022463	Ighmbp2	99	78.362	ENSCPOG00000007063	IGHMBP2	94	76.861	Cavia_porcellus
MGP_CAROLIEiJ_G0022463	Ighmbp2	99	76.219	ENSCCAG00000027106	IGHMBP2	99	75.876	Cebus_capucinus
MGP_CAROLIEiJ_G0022463	Ighmbp2	100	68.458	ENSCATG00000031229	IGHMBP2	100	68.168	Cercocebus_atys
MGP_CAROLIEiJ_G0022463	Ighmbp2	99	78.370	ENSCLAG00000015500	IGHMBP2	99	76.962	Chinchilla_lanigera
MGP_CAROLIEiJ_G0022463	Ighmbp2	100	75.569	ENSCSAG00000009185	IGHMBP2	100	75.000	Chlorocebus_sabaeus
MGP_CAROLIEiJ_G0022463	Ighmbp2	93	64.968	ENSCPBG00000008799	IGHMBP2	99	64.324	Chrysemys_picta_bellii
MGP_CAROLIEiJ_G0022463	Ighmbp2	91	47.579	ENSCING00000005102	zf(an1/a20like)-2	87	48.639	Ciona_intestinalis
MGP_CAROLIEiJ_G0022463	Ighmbp2	99	46.032	ENSCSAVG00000006222	-	99	45.751	Ciona_savignyi
MGP_CAROLIEiJ_G0022463	Ighmbp2	100	75.842	ENSCANG00000043714	IGHMBP2	100	74.850	Colobus_angolensis_palliatus
MGP_CAROLIEiJ_G0022463	Ighmbp2	100	89.617	ENSCGRG00001019126	Ighmbp2	100	89.315	Cricetulus_griseus_chok1gshd
MGP_CAROLIEiJ_G0022463	Ighmbp2	100	89.617	ENSCGRG00000009642	Ighmbp2	100	89.315	Cricetulus_griseus_crigri
MGP_CAROLIEiJ_G0022463	Ighmbp2	99	57.515	ENSCSEG00000007513	ighmbp2	99	57.773	Cynoglossus_semilaevis
MGP_CAROLIEiJ_G0022463	Ighmbp2	97	59.504	ENSCVAG00000007876	ighmbp2	99	58.884	Cyprinodon_variegatus
MGP_CAROLIEiJ_G0022463	Ighmbp2	99	57.354	ENSDARG00000069274	ighmbp2	99	57.030	Danio_rerio
MGP_CAROLIEiJ_G0022463	Ighmbp2	99	73.759	ENSDNOG00000002334	IGHMBP2	100	72.590	Dasypus_novemcinctus
MGP_CAROLIEiJ_G0022463	Ighmbp2	76	74.206	ENSDORG00000026350	Ighmbp2	99	68.116	Dipodomys_ordii
MGP_CAROLIEiJ_G0022463	Ighmbp2	93	69.253	ENSETEG00000003178	IGHMBP2	93	69.253	Echinops_telfairi
MGP_CAROLIEiJ_G0022463	Ighmbp2	99	52.083	ENSEBUG00000010471	ighmbp2	99	51.386	Eptatretus_burgeri
MGP_CAROLIEiJ_G0022463	Ighmbp2	99	76.104	ENSEASG00005007735	IGHMBP2	100	75.100	Equus_asinus_asinus
MGP_CAROLIEiJ_G0022463	Ighmbp2	96	75.493	ENSECAG00000019360	IGHMBP2	98	74.330	Equus_caballus
MGP_CAROLIEiJ_G0022463	Ighmbp2	99	56.914	ENSELUG00000023450	ighmbp2	99	56.543	Esox_lucius
MGP_CAROLIEiJ_G0022463	Ighmbp2	99	72.239	ENSFCAG00000010879	IGHMBP2	100	71.343	Felis_catus
MGP_CAROLIEiJ_G0022463	Ighmbp2	99	59.740	ENSFALG00000011604	IGHMBP2	100	60.260	Ficedula_albicollis
MGP_CAROLIEiJ_G0022463	Ighmbp2	92	82.975	ENSFDAG00000005011	IGHMBP2	92	78.045	Fukomys_damarensis
MGP_CAROLIEiJ_G0022463	Ighmbp2	99	58.782	ENSFHEG00000021211	ighmbp2	99	58.367	Fundulus_heteroclitus
MGP_CAROLIEiJ_G0022463	Ighmbp2	99	56.928	ENSGMOG00000017553	ighmbp2	99	56.200	Gadus_morhua
MGP_CAROLIEiJ_G0022463	Ighmbp2	96	64.410	ENSGALG00000004328	IGHMBP2	100	62.959	Gallus_gallus
MGP_CAROLIEiJ_G0022463	Ighmbp2	99	57.415	ENSGAFG00000020770	ighmbp2	99	57.942	Gambusia_affinis
MGP_CAROLIEiJ_G0022463	Ighmbp2	99	57.353	ENSGACG00000005293	ighmbp2	99	56.989	Gasterosteus_aculeatus
MGP_CAROLIEiJ_G0022463	Ighmbp2	99	65.797	ENSGAGG00000020312	IGHMBP2	92	64.712	Gopherus_agassizii
MGP_CAROLIEiJ_G0022463	Ighmbp2	100	76.961	ENSGGOG00000012131	IGHMBP2	100	76.000	Gorilla_gorilla
MGP_CAROLIEiJ_G0022463	Ighmbp2	99	58.225	ENSHBUG00000018318	ighmbp2	99	58.325	Haplochromis_burtoni
MGP_CAROLIEiJ_G0022463	Ighmbp2	99	77.163	ENSHGLG00000006468	IGHMBP2	99	75.956	Heterocephalus_glaber_female
MGP_CAROLIEiJ_G0022463	Ighmbp2	99	77.062	ENSHGLG00100009290	IGHMBP2	99	75.855	Heterocephalus_glaber_male
MGP_CAROLIEiJ_G0022463	Ighmbp2	99	58.291	ENSHCOG00000018786	ighmbp2	99	58.149	Hippocampus_comes
MGP_CAROLIEiJ_G0022463	Ighmbp2	99	56.306	ENSIPUG00000023036	ighmbp2	99	55.338	Ictalurus_punctatus
MGP_CAROLIEiJ_G0022463	Ighmbp2	100	68.406	ENSSTOG00000003792	IGHMBP2	92	80.833	Ictidomys_tridecemlineatus
MGP_CAROLIEiJ_G0022463	Ighmbp2	100	82.247	ENSJJAG00000022964	Ighmbp2	100	81.043	Jaculus_jaculus
MGP_CAROLIEiJ_G0022463	Ighmbp2	99	58.829	ENSKMAG00000020284	ighmbp2	99	58.593	Kryptolebias_marmoratus
MGP_CAROLIEiJ_G0022463	Ighmbp2	99	57.001	ENSLBEG00000014501	ighmbp2	99	56.548	Labrus_bergylta
MGP_CAROLIEiJ_G0022463	Ighmbp2	99	58.964	ENSLACG00000018792	IGHMBP2	99	58.580	Latimeria_chalumnae
MGP_CAROLIEiJ_G0022463	Ighmbp2	99	57.015	ENSLOCG00000001512	ighmbp2	99	56.843	Lepisosteus_oculatus
MGP_CAROLIEiJ_G0022463	Ighmbp2	76	71.579	ENSLAFG00000022445	IGHMBP2	100	70.132	Loxodonta_africana
MGP_CAROLIEiJ_G0022463	Ighmbp2	100	75.743	ENSMFAG00000043909	IGHMBP2	100	75.174	Macaca_fascicularis
MGP_CAROLIEiJ_G0022463	Ighmbp2	100	72.393	ENSMNEG00000043511	IGHMBP2	100	72.000	Macaca_nemestrina
MGP_CAROLIEiJ_G0022463	Ighmbp2	100	75.818	ENSMLEG00000043529	IGHMBP2	100	75.250	Mandrillus_leucophaeus
MGP_CAROLIEiJ_G0022463	Ighmbp2	99	57.357	ENSMAMG00000005532	ighmbp2	99	57.415	Mastacembelus_armatus
MGP_CAROLIEiJ_G0022463	Ighmbp2	99	58.200	ENSMZEG00005000665	ighmbp2	99	58.342	Maylandia_zebra
MGP_CAROLIEiJ_G0022463	Ighmbp2	96	63.958	ENSMGAG00000002792	IGHMBP2	100	63.007	Meleagris_gallopavo
MGP_CAROLIEiJ_G0022463	Ighmbp2	100	89.012	ENSMAUG00000019893	Ighmbp2	100	87.702	Mesocricetus_auratus
MGP_CAROLIEiJ_G0022463	Ighmbp2	93	81.857	ENSMICG00000043944	IGHMBP2	99	81.857	Microcebus_murinus
MGP_CAROLIEiJ_G0022463	Ighmbp2	100	89.214	ENSMOCG00000018939	Ighmbp2	100	88.911	Microtus_ochrogaster
MGP_CAROLIEiJ_G0022463	Ighmbp2	99	57.692	ENSMMOG00000001234	ighmbp2	99	57.186	Mola_mola
MGP_CAROLIEiJ_G0022463	Ighmbp2	99	63.781	ENSMODG00000004040	IGHMBP2	89	62.747	Monodelphis_domestica
MGP_CAROLIEiJ_G0022463	Ighmbp2	99	57.157	ENSMALG00000006457	ighmbp2	99	57.372	Monopterus_albus
MGP_CAROLIEiJ_G0022463	Ighmbp2	100	96.479	ENSMUSG00000024831	Ighmbp2	100	96.479	Mus_musculus
MGP_CAROLIEiJ_G0022463	Ighmbp2	100	95.161	MGP_PahariEiJ_G0013960	Ighmbp2	100	95.161	Mus_pahari
MGP_CAROLIEiJ_G0022463	Ighmbp2	100	96.881	MGP_SPRETEiJ_G0014700	Ighmbp2	100	96.881	Mus_spretus
MGP_CAROLIEiJ_G0022463	Ighmbp2	97	73.006	ENSMPUG00000004439	IGHMBP2	99	72.737	Mustela_putorius_furo
MGP_CAROLIEiJ_G0022463	Ighmbp2	100	80.321	ENSNGAG00000006566	Ighmbp2	100	79.618	Nannospalax_galili
MGP_CAROLIEiJ_G0022463	Ighmbp2	93	57.676	ENSNBRG00000014911	ighmbp2	99	57.872	Neolamprologus_brichardi
MGP_CAROLIEiJ_G0022463	Ighmbp2	100	72.056	ENSNLEG00000006609	IGHMBP2	100	71.888	Nomascus_leucogenys
MGP_CAROLIEiJ_G0022463	Ighmbp2	64	60.469	ENSOPRG00000011904	-	99	59.844	Ochotona_princeps
MGP_CAROLIEiJ_G0022463	Ighmbp2	99	77.154	ENSODEG00000017354	IGHMBP2	99	76.583	Octodon_degus
MGP_CAROLIEiJ_G0022463	Ighmbp2	99	58.510	ENSONIG00000015506	ighmbp2	99	58.000	Oreochromis_niloticus
MGP_CAROLIEiJ_G0022463	Ighmbp2	99	57.958	ENSORLG00000006561	ighmbp2	99	57.440	Oryzias_latipes
MGP_CAROLIEiJ_G0022463	Ighmbp2	99	57.555	ENSORLG00020008462	ighmbp2	99	57.639	Oryzias_latipes_hni
MGP_CAROLIEiJ_G0022463	Ighmbp2	99	56.526	ENSORLG00015001563	ighmbp2	99	56.375	Oryzias_latipes_hsok
MGP_CAROLIEiJ_G0022463	Ighmbp2	99	58.010	ENSOMEG00000019296	ighmbp2	99	58.032	Oryzias_melastigma
MGP_CAROLIEiJ_G0022463	Ighmbp2	99	72.881	ENSOGAG00000011671	IGHMBP2	99	71.715	Otolemur_garnettii
MGP_CAROLIEiJ_G0022463	Ighmbp2	97	69.525	ENSOARG00000016959	IGHMBP2	99	69.223	Ovis_aries
MGP_CAROLIEiJ_G0022463	Ighmbp2	100	77.358	ENSPPAG00000027355	IGHMBP2	100	76.400	Pan_paniscus
MGP_CAROLIEiJ_G0022463	Ighmbp2	99	73.428	ENSPPRG00000024194	IGHMBP2	100	72.590	Panthera_pardus
MGP_CAROLIEiJ_G0022463	Ighmbp2	100	77.557	ENSPTRG00000003989	IGHMBP2	100	76.700	Pan_troglodytes
MGP_CAROLIEiJ_G0022463	Ighmbp2	100	72.151	ENSPANG00000023650	IGHMBP2	100	71.557	Papio_anubis
MGP_CAROLIEiJ_G0022463	Ighmbp2	99	57.627	ENSPKIG00000019306	ighmbp2	99	56.859	Paramormyrops_kingsleyae
MGP_CAROLIEiJ_G0022463	Ighmbp2	90	65.410	ENSPSIG00000015808	IGHMBP2	100	64.667	Pelodiscus_sinensis
MGP_CAROLIEiJ_G0022463	Ighmbp2	100	89.617	ENSPEMG00000017775	Ighmbp2	100	89.315	Peromyscus_maniculatus_bairdii
MGP_CAROLIEiJ_G0022463	Ighmbp2	94	69.632	ENSPCIG00000011064	IGHMBP2	87	71.930	Phascolarctos_cinereus
MGP_CAROLIEiJ_G0022463	Ighmbp2	99	57.600	ENSPFOG00000010607	ighmbp2	99	58.576	Poecilia_formosa
MGP_CAROLIEiJ_G0022463	Ighmbp2	99	58.635	ENSPLAG00000003917	ighmbp2	99	58.392	Poecilia_latipinna
MGP_CAROLIEiJ_G0022463	Ighmbp2	99	58.093	ENSPMEG00000021063	ighmbp2	99	58.483	Poecilia_mexicana
MGP_CAROLIEiJ_G0022463	Ighmbp2	99	58.576	ENSPREG00000011223	ighmbp2	99	58.534	Poecilia_reticulata
MGP_CAROLIEiJ_G0022463	Ighmbp2	66	72.892	ENSPPYG00000002965	-	100	72.247	Pongo_abelii
MGP_CAROLIEiJ_G0022463	Ighmbp2	57	75.385	ENSPCAG00000003490	-	57	75.385	Procavia_capensis
MGP_CAROLIEiJ_G0022463	Ighmbp2	99	74.044	ENSPCOG00000018759	IGHMBP2	99	74.220	Propithecus_coquereli
MGP_CAROLIEiJ_G0022463	Ighmbp2	85	69.421	ENSPVAG00000012921	IGHMBP2	100	67.574	Pteropus_vampyrus
MGP_CAROLIEiJ_G0022463	Ighmbp2	99	58.200	ENSPNYG00000015003	ighmbp2	99	58.342	Pundamilia_nyererei
MGP_CAROLIEiJ_G0022463	Ighmbp2	99	57.213	ENSPNAG00000013815	ighmbp2	99	56.552	Pygocentrus_nattereri
MGP_CAROLIEiJ_G0022463	Ighmbp2	100	92.339	ENSRNOG00000013456	Ighmbp2	99	92.036	Rattus_norvegicus
MGP_CAROLIEiJ_G0022463	Ighmbp2	100	75.842	ENSRBIG00000044249	IGHMBP2	100	75.050	Rhinopithecus_bieti
MGP_CAROLIEiJ_G0022463	Ighmbp2	100	76.238	ENSRROG00000045646	IGHMBP2	100	75.449	Rhinopithecus_roxellana
MGP_CAROLIEiJ_G0022463	Ighmbp2	56	37.842	YKL017C	HCS1	84	37.866	Saccharomyces_cerevisiae
MGP_CAROLIEiJ_G0022463	Ighmbp2	100	72.592	ENSSBOG00000021342	IGHMBP2	100	72.627	Saimiri_boliviensis_boliviensis
MGP_CAROLIEiJ_G0022463	Ighmbp2	76	60.000	ENSSHAG00000001585	-	99	60.691	Sarcophilus_harrisii
MGP_CAROLIEiJ_G0022463	Ighmbp2	99	55.854	ENSSFOG00015016074	ighmbp2	92	55.692	Scleropages_formosus
MGP_CAROLIEiJ_G0022463	Ighmbp2	99	57.371	ENSSMAG00000013687	ighmbp2	99	57.200	Scophthalmus_maximus
MGP_CAROLIEiJ_G0022463	Ighmbp2	99	57.597	ENSSDUG00000013150	ighmbp2	99	57.795	Seriola_dumerili
MGP_CAROLIEiJ_G0022463	Ighmbp2	99	57.685	ENSSLDG00000023119	ighmbp2	99	57.795	Seriola_lalandi_dorsalis
MGP_CAROLIEiJ_G0022463	Ighmbp2	64	62.080	ENSSPUG00000008810	IGHMBP2	99	61.876	Sphenodon_punctatus
MGP_CAROLIEiJ_G0022463	Ighmbp2	99	58.317	ENSSPAG00000011541	ighmbp2	99	57.811	Stegastes_partitus
MGP_CAROLIEiJ_G0022463	Ighmbp2	99	72.032	ENSSSCG00000012878	IGHMBP2	99	71.039	Sus_scrofa
MGP_CAROLIEiJ_G0022463	Ighmbp2	96	62.729	ENSTGUG00000006705	-	100	62.719	Taeniopygia_guttata
MGP_CAROLIEiJ_G0022463	Ighmbp2	99	56.929	ENSTRUG00000003491	ighmbp2	99	56.375	Takifugu_rubripes
MGP_CAROLIEiJ_G0022463	Ighmbp2	99	56.349	ENSTNIG00000016069	ighmbp2	99	56.444	Tetraodon_nigroviridis
MGP_CAROLIEiJ_G0022463	Ighmbp2	87	68.839	ENSTBEG00000017260	IGHMBP2	94	68.839	Tupaia_belangeri
MGP_CAROLIEiJ_G0022463	Ighmbp2	88	79.661	ENSTTRG00000013636	IGHMBP2	88	79.661	Tursiops_truncatus
MGP_CAROLIEiJ_G0022463	Ighmbp2	99	74.777	ENSUAMG00000024817	IGHMBP2	100	73.684	Ursus_americanus
MGP_CAROLIEiJ_G0022463	Ighmbp2	99	72.663	ENSUMAG00000018347	IGHMBP2	99	71.948	Ursus_maritimus
MGP_CAROLIEiJ_G0022463	Ighmbp2	99	73.904	ENSVVUG00000004811	IGHMBP2	100	73.202	Vulpes_vulpes
MGP_CAROLIEiJ_G0022463	Ighmbp2	91	63.192	ENSXETG00000031258	IGHMBP2	100	62.486	Xenopus_tropicalis
MGP_CAROLIEiJ_G0022463	Ighmbp2	99	57.430	ENSXCOG00000003758	ighmbp2	99	57.515	Xiphophorus_couchianus
MGP_CAROLIEiJ_G0022463	Ighmbp2	99	57.430	ENSXMAG00000003705	ighmbp2	99	57.631	Xiphophorus_maculatus