EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: MGP_CAROLIEiJ_G0022515 (Gene tree)
Gene ID: 110285493
Gene Symbol: Rbm4b
Alias: 4921506I22Rik|Lark2
Full Name: RNA binding motif protein 4B
Gene Type: protein_coding
Species: Mus_caroli
Status: putative
Strand: Plus strand
Length: 10292 bases
Position: chr19:1503878-1514169
Accession: 110285493
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CAROLIEiJ_P0047524	zf-CCHC	PF00098.23	3.1e-07	1	1
MGP_CAROLIEiJ_P0047524	RRM_5	PF13893.6	3.4e-08	1	2
MGP_CAROLIEiJ_P0047524	RRM_5	PF13893.6	3.4e-08	2	2
MGP_CAROLIEiJ_P0047524	RRM_1	PF00076.22	1.3e-34	1	2
MGP_CAROLIEiJ_P0047524	RRM_1	PF00076.22	1.3e-34	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CAROLIEiJ_T0047522	-	1186	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0047523	-	3679	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0047524	-	1793	XM_021151695	MGP_CAROLIEiJ_P0047524	357 (aa)	XP_021007354	UPI000A3191C9
MGP_CAROLIEiJ_T0047525	-	5554	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0047526	-	410	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_CAROLIEiJ_G0022515's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CAROLIEiJ_G0022515's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CAROLIEiJ_G0022515	Rbm4b	99	62.155	MGP_CAROLIEiJ_G0022514	-	100	61.602
MGP_CAROLIEiJ_G0022515	Rbm4b	100	87.258	MGP_CAROLIEiJ_G0022516	-	97	100.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_CAROLIEiJ_G0022515	Rbm4b	96	98.780	ENSG00000173933	RBM4	97	98.551	Homo_sapiens
MGP_CAROLIEiJ_G0022515	Rbm4b	100	96.100	ENSG00000173914	RBM4B	97	99.281	Homo_sapiens
MGP_CAROLIEiJ_G0022515	Rbm4b	99	62.295	ENSG00000248643	RBM14-RBM4	100	60.822	Homo_sapiens
MGP_CAROLIEiJ_G0022515	Rbm4b	100	96.936	ENSAMEG00000010906	RBM4B	100	96.936	Ailuropoda_melanoleuca
MGP_CAROLIEiJ_G0022515	Rbm4b	100	86.027	ENSAMEG00000010914	RBM4	100	85.479	Ailuropoda_melanoleuca
MGP_CAROLIEiJ_G0022515	Rbm4b	100	95.822	ENSANAG00000023478	RBM4B	97	99.281	Aotus_nancymaae
MGP_CAROLIEiJ_G0022515	Rbm4b	100	96.100	ENSBTAG00000000423	RBM4B	100	96.100	Bos_taurus
MGP_CAROLIEiJ_G0022515	Rbm4b	100	86.740	ENSBTAG00000031688	RBM4	100	86.464	Bos_taurus
MGP_CAROLIEiJ_G0022515	Rbm4b	100	96.100	ENSCJAG00000013666	RBM4B	97	99.281	Callithrix_jacchus
MGP_CAROLIEiJ_G0022515	Rbm4b	100	96.657	ENSCAFG00000012378	RBM4B	100	96.657	Canis_familiaris
MGP_CAROLIEiJ_G0022515	Rbm4b	100	86.027	ENSCAFG00000012388	RBM4	100	85.479	Canis_familiaris
MGP_CAROLIEiJ_G0022515	Rbm4b	100	86.027	ENSCAFG00020015515	RBM4	100	85.479	Canis_lupus_dingo
MGP_CAROLIEiJ_G0022515	Rbm4b	100	96.657	ENSCAFG00020015519	RBM4B	100	96.657	Canis_lupus_dingo
MGP_CAROLIEiJ_G0022515	Rbm4b	100	96.379	ENSCHIG00000008907	RBM4B	100	96.379	Capra_hircus
MGP_CAROLIEiJ_G0022515	Rbm4b	100	86.740	ENSCHIG00000020613	RBM4	100	86.464	Capra_hircus
MGP_CAROLIEiJ_G0022515	Rbm4b	65	88.511	ENSTSYG00000009580	RBM4B	96	87.660	Carlito_syrichta
MGP_CAROLIEiJ_G0022515	Rbm4b	100	85.753	ENSCAPG00000016600	RBM4	97	99.275	Cavia_aperea
MGP_CAROLIEiJ_G0022515	Rbm4b	100	96.936	ENSCAPG00000009570	RBM4B	100	96.936	Cavia_aperea
MGP_CAROLIEiJ_G0022515	Rbm4b	100	96.936	ENSCPOG00000013689	RBM4B	100	96.936	Cavia_porcellus
MGP_CAROLIEiJ_G0022515	Rbm4b	100	85.753	ENSCPOG00000013194	RBM4	97	99.275	Cavia_porcellus
MGP_CAROLIEiJ_G0022515	Rbm4b	56	71.642	ENSCCAG00000023319	-	100	71.642	Cebus_capucinus
MGP_CAROLIEiJ_G0022515	Rbm4b	100	96.100	ENSCCAG00000016501	RBM4B	97	99.281	Cebus_capucinus
MGP_CAROLIEiJ_G0022515	Rbm4b	100	96.100	ENSCATG00000035353	RBM4B	97	99.281	Cercocebus_atys
MGP_CAROLIEiJ_G0022515	Rbm4b	100	97.486	ENSCLAG00000015287	RBM4B	100	97.486	Chinchilla_lanigera
MGP_CAROLIEiJ_G0022515	Rbm4b	100	85.479	ENSCLAG00000014756	RBM4	97	99.275	Chinchilla_lanigera
MGP_CAROLIEiJ_G0022515	Rbm4b	100	96.100	ENSCSAG00000008361	RBM4B	100	96.100	Chlorocebus_sabaeus
MGP_CAROLIEiJ_G0022515	Rbm4b	100	96.379	ENSCHOG00000002892	RBM4B	100	96.379	Choloepus_hoffmanni
MGP_CAROLIEiJ_G0022515	Rbm4b	61	77.974	ENSCHOG00000009753	RBM14-RBM4	100	77.093	Choloepus_hoffmanni
MGP_CAROLIEiJ_G0022515	Rbm4b	100	74.278	ENSCPBG00000023800	-	100	73.158	Chrysemys_picta_bellii
MGP_CAROLIEiJ_G0022515	Rbm4b	100	96.100	ENSCANG00000021868	RBM4B	97	99.281	Colobus_angolensis_palliatus
MGP_CAROLIEiJ_G0022515	Rbm4b	100	97.199	ENSCGRG00001024693	Rbm4b	100	97.199	Cricetulus_griseus_chok1gshd
MGP_CAROLIEiJ_G0022515	Rbm4b	100	86.667	ENSCGRG00001016609	-	97	100.000	Cricetulus_griseus_chok1gshd
MGP_CAROLIEiJ_G0022515	Rbm4b	100	86.667	ENSCGRG00000010183	-	97	100.000	Cricetulus_griseus_crigri
MGP_CAROLIEiJ_G0022515	Rbm4b	100	97.199	ENSCGRG00000012112	Rbm4b	100	97.199	Cricetulus_griseus_crigri
MGP_CAROLIEiJ_G0022515	Rbm4b	100	96.369	ENSDNOG00000019500	-	100	96.369	Dasypus_novemcinctus
MGP_CAROLIEiJ_G0022515	Rbm4b	100	95.251	ENSDNOG00000045639	-	100	93.575	Dasypus_novemcinctus
MGP_CAROLIEiJ_G0022515	Rbm4b	100	85.479	ENSDNOG00000032390	RBM4	100	84.932	Dasypus_novemcinctus
MGP_CAROLIEiJ_G0022515	Rbm4b	100	97.199	ENSDORG00000029108	Rbm4b	100	97.199	Dipodomys_ordii
MGP_CAROLIEiJ_G0022515	Rbm4b	100	85.950	ENSDORG00000004538	-	97	97.826	Dipodomys_ordii
MGP_CAROLIEiJ_G0022515	Rbm4b	61	70.909	ENSETEG00000018142	-	100	70.455	Echinops_telfairi
MGP_CAROLIEiJ_G0022515	Rbm4b	100	86.981	ENSEASG00005005064	RBM4	100	86.704	Equus_asinus_asinus
MGP_CAROLIEiJ_G0022515	Rbm4b	100	96.657	ENSEASG00005005068	RBM4B	100	96.657	Equus_asinus_asinus
MGP_CAROLIEiJ_G0022515	Rbm4b	100	86.981	ENSECAG00000022940	RBM4	100	86.704	Equus_caballus
MGP_CAROLIEiJ_G0022515	Rbm4b	100	96.379	ENSECAG00000022987	RBM4B	100	96.379	Equus_caballus
MGP_CAROLIEiJ_G0022515	Rbm4b	100	90.385	ENSEEUG00000000058	RBM4B	100	89.286	Erinaceus_europaeus
MGP_CAROLIEiJ_G0022515	Rbm4b	100	86.027	ENSFCAG00000029651	RBM4	97	98.551	Felis_catus
MGP_CAROLIEiJ_G0022515	Rbm4b	100	97.214	ENSFCAG00000007394	RBM4B	100	97.214	Felis_catus
MGP_CAROLIEiJ_G0022515	Rbm4b	100	69.459	ENSFALG00000002073	-	100	68.835	Ficedula_albicollis
MGP_CAROLIEiJ_G0022515	Rbm4b	100	85.479	ENSFDAG00000005447	RBM4	97	99.275	Fukomys_damarensis
MGP_CAROLIEiJ_G0022515	Rbm4b	100	96.927	ENSFDAG00000015530	RBM4B	100	96.927	Fukomys_damarensis
MGP_CAROLIEiJ_G0022515	Rbm4b	100	76.533	ENSGALG00000037946	-	100	75.401	Gallus_gallus
MGP_CAROLIEiJ_G0022515	Rbm4b	100	74.016	ENSGAGG00000008553	-	100	72.895	Gopherus_agassizii
MGP_CAROLIEiJ_G0022515	Rbm4b	100	96.100	ENSGGOG00000011698	RBM4B	97	99.281	Gorilla_gorilla
MGP_CAROLIEiJ_G0022515	Rbm4b	78	60.606	ENSHGLG00000000117	-	95	69.916	Heterocephalus_glaber_female
MGP_CAROLIEiJ_G0022515	Rbm4b	100	82.353	ENSHGLG00000002853	-	100	81.793	Heterocephalus_glaber_female
MGP_CAROLIEiJ_G0022515	Rbm4b	100	97.214	ENSHGLG00000016412	-	100	97.214	Heterocephalus_glaber_female
MGP_CAROLIEiJ_G0022515	Rbm4b	100	85.479	ENSHGLG00000009991	RBM4	97	99.275	Heterocephalus_glaber_female
MGP_CAROLIEiJ_G0022515	Rbm4b	100	78.393	ENSHGLG00100003854	RBM4	97	99.275	Heterocephalus_glaber_male
MGP_CAROLIEiJ_G0022515	Rbm4b	100	97.207	ENSHGLG00100003978	-	100	97.207	Heterocephalus_glaber_male
MGP_CAROLIEiJ_G0022515	Rbm4b	96	83.871	ENSHGLG00100020033	-	100	83.284	Heterocephalus_glaber_male
MGP_CAROLIEiJ_G0022515	Rbm4b	100	85.753	ENSSTOG00000022811	RBM4	97	98.551	Ictidomys_tridecemlineatus
MGP_CAROLIEiJ_G0022515	Rbm4b	100	96.657	ENSSTOG00000011226	RBM4B	100	96.657	Ictidomys_tridecemlineatus
MGP_CAROLIEiJ_G0022515	Rbm4b	100	95.518	ENSJJAG00000020870	Rbm4b	100	95.518	Jaculus_jaculus
MGP_CAROLIEiJ_G0022515	Rbm4b	100	84.958	ENSLAFG00000028147	-	100	84.637	Loxodonta_africana
MGP_CAROLIEiJ_G0022515	Rbm4b	100	90.251	ENSLAFG00000002285	RBM4B	100	90.251	Loxodonta_africana
MGP_CAROLIEiJ_G0022515	Rbm4b	100	96.100	ENSMFAG00000033927	RBM4B	97	100.000	Macaca_fascicularis
MGP_CAROLIEiJ_G0022515	Rbm4b	100	96.100	ENSMNEG00000043371	RBM4B	97	99.281	Macaca_nemestrina
MGP_CAROLIEiJ_G0022515	Rbm4b	100	96.100	ENSMLEG00000028563	RBM4B	97	100.000	Mandrillus_leucophaeus
MGP_CAROLIEiJ_G0022515	Rbm4b	100	98.039	ENSMAUG00000017027	Rbm4b	100	98.039	Mesocricetus_auratus
MGP_CAROLIEiJ_G0022515	Rbm4b	100	96.100	ENSMICG00000003820	RBM4B	97	99.281	Microcebus_murinus
MGP_CAROLIEiJ_G0022515	Rbm4b	100	98.039	ENSMOCG00000001835	Rbm4b	100	98.039	Microtus_ochrogaster
MGP_CAROLIEiJ_G0022515	Rbm4b	100	84.239	ENSMODG00000008056	-	100	83.967	Monodelphis_domestica
MGP_CAROLIEiJ_G0022515	Rbm4b	100	99.720	ENSMUSG00000033760	Rbm4b	100	99.720	Mus_musculus
MGP_CAROLIEiJ_G0022515	Rbm4b	100	86.704	ENSMUSG00000094936	Rbm4	100	100.000	Mus_musculus
MGP_CAROLIEiJ_G0022515	Rbm4b	100	86.704	ENSMUSG00000096370	Gm21992	100	86.150	Mus_musculus
MGP_CAROLIEiJ_G0022515	Rbm4b	100	86.464	MGP_PahariEiJ_G0014013	-	97	100.000	Mus_pahari
MGP_CAROLIEiJ_G0022515	Rbm4b	100	99.440	MGP_PahariEiJ_G0014012	Rbm4b	100	99.440	Mus_pahari
MGP_CAROLIEiJ_G0022515	Rbm4b	100	86.464	MGP_PahariEiJ_G0014011	-	100	85.912	Mus_pahari
MGP_CAROLIEiJ_G0022515	Rbm4b	100	68.731	MGP_SPRETEiJ_G0023428	-	94	68.111	Mus_spretus
MGP_CAROLIEiJ_G0022515	Rbm4b	100	91.786	MGP_SPRETEiJ_G0023429	-	100	91.786	Mus_spretus
MGP_CAROLIEiJ_G0022515	Rbm4b	100	68.731	MGP_SPRETEiJ_G0023430	-	100	68.111	Mus_spretus
MGP_CAROLIEiJ_G0022515	Rbm4b	100	85.753	ENSMPUG00000003443	RBM4	100	85.205	Mustela_putorius_furo
MGP_CAROLIEiJ_G0022515	Rbm4b	100	96.657	ENSMPUG00000003450	RBM4B	100	96.657	Mustela_putorius_furo
MGP_CAROLIEiJ_G0022515	Rbm4b	99	84.254	ENSMLUG00000004076	RBM4	95	83.702	Myotis_lucifugus
MGP_CAROLIEiJ_G0022515	Rbm4b	100	94.118	ENSMLUG00000001290	RBM4B	100	93.557	Myotis_lucifugus
MGP_CAROLIEiJ_G0022515	Rbm4b	100	97.759	ENSNGAG00000016292	Rbm4b	100	97.759	Nannospalax_galili
MGP_CAROLIEiJ_G0022515	Rbm4b	100	86.575	ENSNLEG00000035021	RBM4	97	98.551	Nomascus_leucogenys
MGP_CAROLIEiJ_G0022515	Rbm4b	100	93.872	ENSNLEG00000006213	RBM4B	97	99.281	Nomascus_leucogenys
MGP_CAROLIEiJ_G0022515	Rbm4b	61	79.295	ENSMEUG00000005739	-	100	78.414	Notamacropus_eugenii
MGP_CAROLIEiJ_G0022515	Rbm4b	100	87.328	ENSMEUG00000001445	-	100	87.052	Notamacropus_eugenii
MGP_CAROLIEiJ_G0022515	Rbm4b	100	96.379	ENSOPRG00000009158	RBM4B	100	96.379	Ochotona_princeps
MGP_CAROLIEiJ_G0022515	Rbm4b	100	86.301	ENSOPRG00000009149	RBM4	100	85.753	Ochotona_princeps
MGP_CAROLIEiJ_G0022515	Rbm4b	100	71.588	ENSODEG00000001866	-	100	71.389	Octodon_degus
MGP_CAROLIEiJ_G0022515	Rbm4b	100	96.657	ENSODEG00000017696	-	100	96.657	Octodon_degus
MGP_CAROLIEiJ_G0022515	Rbm4b	100	86.872	ENSOANG00000011036	-	100	86.313	Ornithorhynchus_anatinus
MGP_CAROLIEiJ_G0022515	Rbm4b	100	79.272	ENSOANG00000003143	-	84	78.212	Ornithorhynchus_anatinus
MGP_CAROLIEiJ_G0022515	Rbm4b	100	97.214	ENSOCUG00000006695	LARK	100	97.214	Oryctolagus_cuniculus
MGP_CAROLIEiJ_G0022515	Rbm4b	100	85.753	ENSOCUG00000004731	RBM4	100	85.205	Oryctolagus_cuniculus
MGP_CAROLIEiJ_G0022515	Rbm4b	100	96.936	ENSOGAG00000015648	RBM4B	100	96.936	Otolemur_garnettii
MGP_CAROLIEiJ_G0022515	Rbm4b	100	86.339	ENSOGAG00000015647	RBM4	100	84.658	Otolemur_garnettii
MGP_CAROLIEiJ_G0022515	Rbm4b	100	85.635	ENSOARG00000007700	RBM4	100	85.359	Ovis_aries
MGP_CAROLIEiJ_G0022515	Rbm4b	100	93.388	ENSOARG00000007759	RBM4B	100	94.215	Ovis_aries
MGP_CAROLIEiJ_G0022515	Rbm4b	100	96.100	ENSPPAG00000015125	RBM4B	97	99.281	Pan_paniscus
MGP_CAROLIEiJ_G0022515	Rbm4b	100	96.936	ENSPPRG00000003388	RBM4B	100	96.936	Panthera_pardus
MGP_CAROLIEiJ_G0022515	Rbm4b	100	86.027	ENSPPRG00000003533	RBM4	97	98.551	Panthera_pardus
MGP_CAROLIEiJ_G0022515	Rbm4b	100	96.936	ENSPTIG00000015426	RBM4B	100	96.936	Panthera_tigris_altaica
MGP_CAROLIEiJ_G0022515	Rbm4b	100	79.558	ENSPTIG00000016180	RBM4	97	99.275	Panthera_tigris_altaica
MGP_CAROLIEiJ_G0022515	Rbm4b	100	96.100	ENSPTRG00000003935	RBM4B	97	99.281	Pan_troglodytes
MGP_CAROLIEiJ_G0022515	Rbm4b	100	96.100	ENSPANG00000020672	RBM4B	97	99.281	Papio_anubis
MGP_CAROLIEiJ_G0022515	Rbm4b	100	75.806	ENSPSIG00000003430	-	100	74.663	Pelodiscus_sinensis
MGP_CAROLIEiJ_G0022515	Rbm4b	77	80.969	ENSPSIG00000003477	-	93	79.861	Pelodiscus_sinensis
MGP_CAROLIEiJ_G0022515	Rbm4b	100	98.603	ENSPEMG00000009144	Rbm4b	100	98.603	Peromyscus_maniculatus_bairdii
MGP_CAROLIEiJ_G0022515	Rbm4b	100	96.100	ENSPPYG00000003010	RBM4B	100	96.100	Pongo_abelii
MGP_CAROLIEiJ_G0022515	Rbm4b	100	85.479	ENSPPYG00000003012	RBM4	100	84.066	Pongo_abelii
MGP_CAROLIEiJ_G0022515	Rbm4b	100	86.301	ENSPCAG00000003393	-	100	85.753	Procavia_capensis
MGP_CAROLIEiJ_G0022515	Rbm4b	100	95.822	ENSPCOG00000027885	RBM4B	97	99.281	Propithecus_coquereli
MGP_CAROLIEiJ_G0022515	Rbm4b	100	96.379	ENSPVAG00000010487	RBM4B	100	96.379	Pteropus_vampyrus
MGP_CAROLIEiJ_G0022515	Rbm4b	100	85.753	ENSPVAG00000010486	RBM4	100	85.205	Pteropus_vampyrus
MGP_CAROLIEiJ_G0022515	Rbm4b	100	85.753	ENSRNOG00000050741	Rbm4	97	100.000	Rattus_norvegicus
MGP_CAROLIEiJ_G0022515	Rbm4b	100	99.160	ENSRNOG00000061795	Rbm4b	100	99.160	Rattus_norvegicus
MGP_CAROLIEiJ_G0022515	Rbm4b	100	96.100	ENSRBIG00000019394	RBM4B	97	99.281	Rhinopithecus_bieti
MGP_CAROLIEiJ_G0022515	Rbm4b	100	96.100	ENSRROG00000032850	RBM4B	97	99.281	Rhinopithecus_roxellana
MGP_CAROLIEiJ_G0022515	Rbm4b	100	95.822	ENSSBOG00000034474	RBM4B	100	95.822	Saimiri_boliviensis_boliviensis
MGP_CAROLIEiJ_G0022515	Rbm4b	100	87.709	ENSSHAG00000008386	-	100	87.430	Sarcophilus_harrisii
MGP_CAROLIEiJ_G0022515	Rbm4b	100	95.810	ENSSARG00000010710	RBM4B	100	95.810	Sorex_araneus
MGP_CAROLIEiJ_G0022515	Rbm4b	100	86.027	ENSSSCG00000032437	RBM4	100	85.479	Sus_scrofa
MGP_CAROLIEiJ_G0022515	Rbm4b	78	79.863	ENSTGUG00000016779	-	92	79.861	Taeniopygia_guttata
MGP_CAROLIEiJ_G0022515	Rbm4b	64	94.091	ENSTBEG00000003727	-	68	94.836	Tupaia_belangeri
MGP_CAROLIEiJ_G0022515	Rbm4b	100	96.359	ENSTBEG00000003748	RBM4B	100	96.359	Tupaia_belangeri
MGP_CAROLIEiJ_G0022515	Rbm4b	100	85.479	ENSTTRG00000011164	RBM4	100	84.932	Tursiops_truncatus
MGP_CAROLIEiJ_G0022515	Rbm4b	100	96.657	ENSTTRG00000011166	RBM4B	100	96.657	Tursiops_truncatus
MGP_CAROLIEiJ_G0022515	Rbm4b	100	86.027	ENSUAMG00000014882	RBM4	97	98.551	Ursus_americanus
MGP_CAROLIEiJ_G0022515	Rbm4b	100	96.657	ENSUAMG00000004745	RBM4B	100	96.657	Ursus_americanus
MGP_CAROLIEiJ_G0022515	Rbm4b	65	95.319	ENSUMAG00000011738	-	97	99.275	Ursus_maritimus
MGP_CAROLIEiJ_G0022515	Rbm4b	100	85.753	ENSVPAG00000001949	RBM4	100	85.205	Vicugna_pacos
MGP_CAROLIEiJ_G0022515	Rbm4b	100	96.379	ENSVPAG00000001950	RBM4B	100	96.379	Vicugna_pacos
MGP_CAROLIEiJ_G0022515	Rbm4b	100	85.479	ENSVVUG00000010622	RBM4	100	84.932	Vulpes_vulpes
MGP_CAROLIEiJ_G0022515	Rbm4b	100	96.657	ENSVVUG00000010619	RBM4B	100	96.657	Vulpes_vulpes