EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
MGP_CAROLIEiJ_G0022516 (Gene tree)
Gene ID
110285218
Gene Symbol
-
Alias
-
Full Name
-
Gene Type
protein_coding
Species
Mus_caroli
Status
putative
Strand
Minus strand
Length
9559 bases
Position
chr19:1530704-1540262
Accession
-
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
MGP_CAROLIEiJ_P0047527zf-CCHCPF00098.233e-0711
MGP_CAROLIEiJ_P0047527RRM_5PF13893.64.3e-0812
MGP_CAROLIEiJ_P0047527RRM_5PF13893.64.3e-0822
MGP_CAROLIEiJ_P0047530RRM_5PF13893.61.9e-0611
MGP_CAROLIEiJ_P0047530RRM_1PF00076.229.6e-3512
MGP_CAROLIEiJ_P0047530RRM_1PF00076.229.6e-3522
MGP_CAROLIEiJ_P0047527RRM_1PF00076.221.3e-3412
MGP_CAROLIEiJ_P0047527RRM_1PF00076.221.3e-3422
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
MGP_CAROLIEiJ_T0047530-1015-MGP_CAROLIEiJ_P0047530143 (aa)-UPI00001C75AB
MGP_CAROLIEiJ_T0047531-2744--- (aa)--
MGP_CAROLIEiJ_T0047527-2614-MGP_CAROLIEiJ_P0047527361 (aa)--
Gene Model
Click here to download MGP_CAROLIEiJ_G0022516's gene model file
Protein-Protein Interaction (PPI)

Clik here to download MGP_CAROLIEiJ_G0022516's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
MGP_CAROLIEiJ_G0022516-9430.345MGP_CAROLIEiJ_G0030548Tial18430.088
MGP_CAROLIEiJ_G0022516-5230.120MGP_CAROLIEiJ_G0026289Elavl46130.120
MGP_CAROLIEiJ_G0022516-5234.667MGP_CAROLIEiJ_G0024606Srsf65634.667
MGP_CAROLIEiJ_G0022516-9974.862MGP_CAROLIEiJ_G0022514-10074.862
MGP_CAROLIEiJ_G0022516-97100.000MGP_CAROLIEiJ_G0022515Rbm4b10087.258
MGP_CAROLIEiJ_G0022516-9744.604MGP_CAROLIEiJ_G0022517Rbm149441.964
MGP_CAROLIEiJ_G0022516-5032.500MGP_CAROLIEiJ_G0033098Rbmx8331.765
MGP_CAROLIEiJ_G0022516-9830.000MGP_CAROLIEiJ_G0028595Tia18530.000
MGP_CAROLIEiJ_G0022516-7733.036MGP_CAROLIEiJ_G0019341Pspc19336.066
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
MGP_CAROLIEiJ_G0022516-10098.601ENSG00000173933RBM410098.601Homo_sapiens
MGP_CAROLIEiJ_G0022516-9971.311ENSG00000248643RBM14-RBM410068.852Homo_sapiens
MGP_CAROLIEiJ_G0022516-97100.000ENSG00000173914RBM4B97100.000Homo_sapiens
MGP_CAROLIEiJ_G0022516-10095.628ENSAMEG00000010914RBM410095.628Ailuropoda_melanoleuca
MGP_CAROLIEiJ_G0022516-97100.000ENSAMEG00000010906RBM4B10089.197Ailuropoda_melanoleuca
MGP_CAROLIEiJ_G0022516-97100.000ENSANAG00000023478RBM4B97100.000Aotus_nancymaae
MGP_CAROLIEiJ_G0022516-10095.105ENSANAG00000033986-8795.105Aotus_nancymaae
MGP_CAROLIEiJ_G0022516-97100.000ENSBTAG00000000423RBM4B10089.474Bos_taurus
MGP_CAROLIEiJ_G0022516-9798.551ENSBTAG00000031688RBM410092.562Bos_taurus
MGP_CAROLIEiJ_G0022516-97100.000ENSCJAG00000013666RBM4B97100.000Callithrix_jacchus
MGP_CAROLIEiJ_G0022516-97100.000ENSCAFG00000012378RBM4B10088.920Canis_familiaris
MGP_CAROLIEiJ_G0022516-10095.628ENSCAFG00000012388RBM410095.628Canis_familiaris
MGP_CAROLIEiJ_G0022516-97100.000ENSCAFG00020015519RBM4B10088.920Canis_lupus_dingo
MGP_CAROLIEiJ_G0022516-10095.628ENSCAFG00020015515RBM410095.628Canis_lupus_dingo
MGP_CAROLIEiJ_G0022516-9798.551ENSCHIG00000020613RBM410092.562Capra_hircus
MGP_CAROLIEiJ_G0022516-97100.000ENSCHIG00000008907RBM4B10089.474Capra_hircus
MGP_CAROLIEiJ_G0022516-6679.747ENSTSYG00000009580RBM4B9679.747Carlito_syrichta
MGP_CAROLIEiJ_G0022516-9485.981ENSTSYG00000036168-8685.981Carlito_syrichta
MGP_CAROLIEiJ_G0022516-97100.000ENSCAPG00000009570RBM4B10088.643Cavia_aperea
MGP_CAROLIEiJ_G0022516-10099.301ENSCAPG00000016600RBM410099.301Cavia_aperea
MGP_CAROLIEiJ_G0022516-10099.301ENSCPOG00000013194RBM410099.301Cavia_porcellus
MGP_CAROLIEiJ_G0022516-97100.000ENSCPOG00000013689RBM4B10088.643Cavia_porcellus
MGP_CAROLIEiJ_G0022516-9971.127ENSCCAG00000023319-10073.134Cebus_capucinus
MGP_CAROLIEiJ_G0022516-97100.000ENSCCAG00000016501RBM4B97100.000Cebus_capucinus
MGP_CAROLIEiJ_G0022516-10095.804ENSCCAG00000007508-10095.804Cebus_capucinus
MGP_CAROLIEiJ_G0022516-97100.000ENSCATG00000035353RBM4B97100.000Cercocebus_atys
MGP_CAROLIEiJ_G0022516-10099.301ENSCLAG00000014756RBM410099.301Chinchilla_lanigera
MGP_CAROLIEiJ_G0022516-97100.000ENSCLAG00000015287RBM4B10088.643Chinchilla_lanigera
MGP_CAROLIEiJ_G0022516-97100.000ENSCSAG00000008361RBM4B10088.643Chlorocebus_sabaeus
MGP_CAROLIEiJ_G0022516-97100.000ENSCHOG00000002892RBM4B10089.751Choloepus_hoffmanni
MGP_CAROLIEiJ_G0022516-6289.035ENSCHOG00000009753RBM14-RBM410087.719Choloepus_hoffmanni
MGP_CAROLIEiJ_G0022516-10094.406ENSCPBG00000023800-10073.333Chrysemys_picta_bellii
MGP_CAROLIEiJ_G0022516-97100.000ENSCANG00000021868RBM4B97100.000Colobus_angolensis_palliatus
MGP_CAROLIEiJ_G0022516-97100.000ENSCGRG00001024693Rbm4b10087.258Cricetulus_griseus_chok1gshd
MGP_CAROLIEiJ_G0022516-100100.000ENSCGRG00001016609-100100.000Cricetulus_griseus_chok1gshd
MGP_CAROLIEiJ_G0022516-100100.000ENSCGRG00000010183-100100.000Cricetulus_griseus_crigri
MGP_CAROLIEiJ_G0022516-97100.000ENSCGRG00000012112Rbm4b10087.258Cricetulus_griseus_crigri
MGP_CAROLIEiJ_G0022516-9798.551ENSDNOG00000045639-10088.366Dasypus_novemcinctus
MGP_CAROLIEiJ_G0022516-9797.826ENSDNOG00000032390RBM410092.077Dasypus_novemcinctus
MGP_CAROLIEiJ_G0022516-97100.000ENSDNOG00000019500-10089.474Dasypus_novemcinctus
MGP_CAROLIEiJ_G0022516-97100.000ENSDORG00000029108Rbm4b10086.981Dipodomys_ordii
MGP_CAROLIEiJ_G0022516-10097.902ENSDORG00000004538-10097.902Dipodomys_ordii
MGP_CAROLIEiJ_G0022516-6263.677ENSETEG00000018142-10064.574Echinops_telfairi
MGP_CAROLIEiJ_G0022516-10096.685ENSEASG00005005064RBM410096.685Equus_asinus_asinus
MGP_CAROLIEiJ_G0022516-97100.000ENSEASG00005005068RBM4B10088.920Equus_asinus_asinus
MGP_CAROLIEiJ_G0022516-10096.685ENSECAG00000022940RBM410096.685Equus_caballus
MGP_CAROLIEiJ_G0022516-97100.000ENSECAG00000022987RBM4B10088.643Equus_caballus
MGP_CAROLIEiJ_G0022516-9797.826ENSEEUG00000000058RBM4B10086.339Erinaceus_europaeus
MGP_CAROLIEiJ_G0022516-10098.601ENSFCAG00000029651RBM410098.601Felis_catus
MGP_CAROLIEiJ_G0022516-97100.000ENSFCAG00000007394RBM4B97100.000Felis_catus
MGP_CAROLIEiJ_G0022516-9797.826ENSFALG00000002073-10067.857Ficedula_albicollis
MGP_CAROLIEiJ_G0022516-10099.301ENSFDAG00000005447RBM410099.301Fukomys_damarensis
MGP_CAROLIEiJ_G0022516-9991.603ENSFDAG00000013661-9691.603Fukomys_damarensis
MGP_CAROLIEiJ_G0022516-97100.000ENSFDAG00000015530RBM4B10088.643Fukomys_damarensis
MGP_CAROLIEiJ_G0022516-9797.826ENSGALG00000037946-10074.255Gallus_gallus
MGP_CAROLIEiJ_G0022516-9797.826ENSGALG00000040489-8497.826Gallus_gallus
MGP_CAROLIEiJ_G0022516-9797.101ENSGAGG00000008553-10073.670Gopherus_agassizii
MGP_CAROLIEiJ_G0022516-9877.143ENSGGOG00000043023-9878.102Gorilla_gorilla
MGP_CAROLIEiJ_G0022516-10097.203ENSGGOG00000011698RBM4B97100.000Gorilla_gorilla
MGP_CAROLIEiJ_G0022516-9789.855ENSHGLG00000002853-10074.792Heterocephalus_glaber_female
MGP_CAROLIEiJ_G0022516-97100.000ENSHGLG00000016412-10088.920Heterocephalus_glaber_female
MGP_CAROLIEiJ_G0022516-9765.942ENSHGLG00000000117-9566.482Heterocephalus_glaber_female
MGP_CAROLIEiJ_G0022516-10098.601ENSHGLG00000009991RBM410098.601Heterocephalus_glaber_female
MGP_CAROLIEiJ_G0022516-9789.855ENSHGLG00100020033-10075.942Heterocephalus_glaber_male
MGP_CAROLIEiJ_G0022516-97100.000ENSHGLG00100003978-10088.122Heterocephalus_glaber_male
MGP_CAROLIEiJ_G0022516-10098.601ENSHGLG00100003854RBM410098.601Heterocephalus_glaber_male
MGP_CAROLIEiJ_G0022516-10098.601ENSSTOG00000022811RBM410098.601Ictidomys_tridecemlineatus
MGP_CAROLIEiJ_G0022516-97100.000ENSSTOG00000011226RBM4B10088.920Ictidomys_tridecemlineatus
MGP_CAROLIEiJ_G0022516-9375.940ENSJJAG00000003168-9274.627Jaculus_jaculus
MGP_CAROLIEiJ_G0022516-9796.350ENSJJAG00000020870Rbm4b10085.596Jaculus_jaculus
MGP_CAROLIEiJ_G0022516-97100.000ENSLAFG00000002285RBM4B10085.873Loxodonta_africana
MGP_CAROLIEiJ_G0022516-97100.000ENSLAFG00000028147-10090.164Loxodonta_africana
MGP_CAROLIEiJ_G0022516-10097.902ENSMFAG00000033927RBM4B97100.000Macaca_fascicularis
MGP_CAROLIEiJ_G0022516-97100.000ENSMNEG00000043371RBM4B97100.000Macaca_nemestrina
MGP_CAROLIEiJ_G0022516-10097.902ENSMLEG00000028563RBM4B97100.000Mandrillus_leucophaeus
MGP_CAROLIEiJ_G0022516-97100.000ENSMAUG00000017027Rbm4b10086.150Mesocricetus_auratus
MGP_CAROLIEiJ_G0022516-10094.406ENSMICG00000003817-10094.406Microcebus_murinus
MGP_CAROLIEiJ_G0022516-9999.291ENSMICG00000003820RBM4B97100.000Microcebus_murinus
MGP_CAROLIEiJ_G0022516-10096.503ENSMICG00000047975-9996.503Microcebus_murinus
MGP_CAROLIEiJ_G0022516-97100.000ENSMOCG00000001835Rbm4b10086.704Microtus_ochrogaster
MGP_CAROLIEiJ_G0022516-9797.101ENSMODG00000008056-10086.450Monodelphis_domestica
MGP_CAROLIEiJ_G0022516-10099.446ENSMUSG00000096370Gm2199210099.446Mus_musculus
MGP_CAROLIEiJ_G0022516-100100.000ENSMUSG00000094936Rbm4100100.000Mus_musculus
MGP_CAROLIEiJ_G0022516-10097.203ENSMUSG00000033760Rbm4b9497.203Mus_musculus
MGP_CAROLIEiJ_G0022516-100100.000MGP_PahariEiJ_G0014013-100100.000Mus_pahari
MGP_CAROLIEiJ_G0022516-97100.000MGP_PahariEiJ_G0014012Rbm4b10086.704Mus_pahari
MGP_CAROLIEiJ_G0022516-10099.171MGP_PahariEiJ_G0014011-10099.171Mus_pahari
MGP_CAROLIEiJ_G0022516-10082.972MGP_SPRETEiJ_G0023430-10082.972Mus_spretus
MGP_CAROLIEiJ_G0022516-10082.972MGP_SPRETEiJ_G0023428-9482.972Mus_spretus
MGP_CAROLIEiJ_G0022516-10075.352MGP_SPRETEiJ_G0023429-10076.056Mus_spretus
MGP_CAROLIEiJ_G0022516-10095.902ENSMPUG00000003443RBM410095.902Mustela_putorius_furo
MGP_CAROLIEiJ_G0022516-97100.000ENSMPUG00000003450RBM4B10089.474Mustela_putorius_furo
MGP_CAROLIEiJ_G0022516-9797.826ENSMLUG00000004076RBM49590.909Myotis_lucifugus
MGP_CAROLIEiJ_G0022516-97100.000ENSMLUG00000001290RBM4B10087.535Myotis_lucifugus
MGP_CAROLIEiJ_G0022516-97100.000ENSNGAG00000016292Rbm4b10087.258Nannospalax_galili
MGP_CAROLIEiJ_G0022516-10098.601ENSNLEG00000035021RBM410098.601Nomascus_leucogenys
MGP_CAROLIEiJ_G0022516-10097.203ENSNLEG00000006213RBM4B97100.000Nomascus_leucogenys
MGP_CAROLIEiJ_G0022516-9798.551ENSMEUG00000001445-10087.945Notamacropus_eugenii
MGP_CAROLIEiJ_G0022516-6284.211ENSMEUG00000005739-10083.333Notamacropus_eugenii
MGP_CAROLIEiJ_G0022516-97100.000ENSOPRG00000009158RBM4B10089.197Ochotona_princeps
MGP_CAROLIEiJ_G0022516-9798.551ENSOPRG00000009149RBM410092.623Ochotona_princeps
MGP_CAROLIEiJ_G0022516-9799.275ENSODEG00000017696-10088.366Octodon_degus
MGP_CAROLIEiJ_G0022516-10095.804ENSODEG00000019143-10095.804Octodon_degus
MGP_CAROLIEiJ_G0022516-10077.622ENSODEG00000006635-10077.622Octodon_degus
MGP_CAROLIEiJ_G0022516-10097.203ENSODEG00000020039-10097.203Octodon_degus
MGP_CAROLIEiJ_G0022516-9686.861ENSODEG00000001866-10077.285Octodon_degus
MGP_CAROLIEiJ_G0022516-9799.275ENSOANG00000003143-8478.393Ornithorhynchus_anatinus
MGP_CAROLIEiJ_G0022516-9799.275ENSOANG00000011036-10083.657Ornithorhynchus_anatinus
MGP_CAROLIEiJ_G0022516-97100.000ENSOCUG00000006695LARK10088.920Oryctolagus_cuniculus
MGP_CAROLIEiJ_G0022516-10095.902ENSOCUG00000004731RBM410095.902Oryctolagus_cuniculus
MGP_CAROLIEiJ_G0022516-97100.000ENSOGAG00000015648RBM4B10088.920Otolemur_garnettii
MGP_CAROLIEiJ_G0022516-9798.551ENSOGAG00000015647RBM410095.355Otolemur_garnettii
MGP_CAROLIEiJ_G0022516-9798.551ENSOARG00000007700RBM410090.909Ovis_aries
MGP_CAROLIEiJ_G0022516-97100.000ENSOARG00000007759RBM4B10088.493Ovis_aries
MGP_CAROLIEiJ_G0022516-10097.203ENSPPAG00000015125RBM4B97100.000Pan_paniscus
MGP_CAROLIEiJ_G0022516-97100.000ENSPPRG00000003388RBM4B97100.000Panthera_pardus
MGP_CAROLIEiJ_G0022516-10098.601ENSPPRG00000003533RBM410098.601Panthera_pardus
MGP_CAROLIEiJ_G0022516-97100.000ENSPTIG00000015426RBM4B97100.000Panthera_tigris_altaica
MGP_CAROLIEiJ_G0022516-10099.301ENSPTIG00000016180RBM410099.301Panthera_tigris_altaica
MGP_CAROLIEiJ_G0022516-10097.203ENSPTRG00000003935RBM4B97100.000Pan_troglodytes
MGP_CAROLIEiJ_G0022516-97100.000ENSPANG00000020672RBM4B97100.000Papio_anubis
MGP_CAROLIEiJ_G0022516-9796.377ENSPSIG00000003430-10074.317Pelodiscus_sinensis
MGP_CAROLIEiJ_G0022516-9796.377ENSPSIG00000003477-9577.003Pelodiscus_sinensis
MGP_CAROLIEiJ_G0022516-97100.000ENSPEMG00000009144Rbm4b10087.535Peromyscus_maniculatus_bairdii
MGP_CAROLIEiJ_G0022516-10094.521ENSPPYG00000003012RBM410092.055Pongo_abelii
MGP_CAROLIEiJ_G0022516-97100.000ENSPPYG00000003010RBM4B10088.643Pongo_abelii
MGP_CAROLIEiJ_G0022516-9799.275ENSPCAG00000003393-10090.984Procavia_capensis
MGP_CAROLIEiJ_G0022516-97100.000ENSPCOG00000027885RBM4B97100.000Propithecus_coquereli
MGP_CAROLIEiJ_G0022516-9798.551ENSPVAG00000010486RBM410092.350Pteropus_vampyrus
MGP_CAROLIEiJ_G0022516-97100.000ENSPVAG00000010487RBM4B10089.197Pteropus_vampyrus
MGP_CAROLIEiJ_G0022516-100100.000ENSRNOG00000050741Rbm4100100.000Rattus_norvegicus
MGP_CAROLIEiJ_G0022516-97100.000ENSRNOG00000061795Rbm4b10087.535Rattus_norvegicus
MGP_CAROLIEiJ_G0022516-97100.000ENSRBIG00000019394RBM4B97100.000Rhinopithecus_bieti
MGP_CAROLIEiJ_G0022516-9798.551ENSRROG00000032796-9098.592Rhinopithecus_roxellana
MGP_CAROLIEiJ_G0022516-97100.000ENSRROG00000032850RBM4B97100.000Rhinopithecus_roxellana
MGP_CAROLIEiJ_G0022516-9799.275ENSSBOG00000034474RBM4B9799.275Saimiri_boliviensis_boliviensis
MGP_CAROLIEiJ_G0022516-9799.275ENSSHAG00000008386-10088.366Sarcophilus_harrisii
MGP_CAROLIEiJ_G0022516-97100.000ENSSARG00000010710RBM4B10089.197Sorex_araneus
MGP_CAROLIEiJ_G0022516-10095.628ENSSSCG00000032437RBM410095.628Sus_scrofa
MGP_CAROLIEiJ_G0022516-9797.101ENSTGUG00000016779-9476.307Taeniopygia_guttata
MGP_CAROLIEiJ_G0022516-97100.000ENSTBEG00000003748RBM4B10087.258Tupaia_belangeri
MGP_CAROLIEiJ_G0022516-9698.400ENSTBEG00000003727-7098.182Tupaia_belangeri
MGP_CAROLIEiJ_G0022516-9798.551ENSTTRG00000011164RBM410091.257Tursiops_truncatus
MGP_CAROLIEiJ_G0022516-9799.275ENSTTRG00000011166RBM4B10088.920Tursiops_truncatus
MGP_CAROLIEiJ_G0022516-97100.000ENSUAMG00000004745RBM4B10089.474Ursus_americanus
MGP_CAROLIEiJ_G0022516-10098.601ENSUAMG00000014882RBM410098.601Ursus_americanus
MGP_CAROLIEiJ_G0022516-10099.301ENSUMAG00000011738-10099.301Ursus_maritimus
MGP_CAROLIEiJ_G0022516-9799.275ENSVPAG00000001950RBM4B10088.920Vicugna_pacos
MGP_CAROLIEiJ_G0022516-9798.551ENSVPAG00000001949RBM410091.257Vicugna_pacos
MGP_CAROLIEiJ_G0022516-97100.000ENSVVUG00000010619RBM4B10088.920Vulpes_vulpes
MGP_CAROLIEiJ_G0022516-9797.101ENSVVUG00000010622RBM410092.077Vulpes_vulpes
MGP_CAROLIEiJ_G0022516-9987.943ENSVVUG00000011717-9687.943Vulpes_vulpes

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