EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_CAROLIEiJ_G0022539 (Gene tree)
Gene ID: 110285513
Gene Symbol: Sf3b2
Alias: 145kDa|2610311M13Rik|2810441F20Rik|B230398H18Rik|SAP145|SF3b1|SF3b145|SF3b150
Full Name: splicing factor 3b subunit 2
Gene Type: protein_coding
Species: Mus_caroli
Status: putative
Strand: Minus strand
Length: 20927 bases
Position: chr19:2014270-2035196
Accession: 110285513
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CAROLIEiJ_P0047582	DUF382	PF04037.13	2e-59	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CAROLIEiJ_T0047582	-	3227	XM_021151745	MGP_CAROLIEiJ_P0047582	877 (aa)	XP_021007404	UPI000A31A3A3

Gene Model

Click here to download MGP_CAROLIEiJ_G0022539's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CAROLIEiJ_G0022539's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_CAROLIEiJ_G0022539	Sf3b2	100	96.925	ENSG00000087365	SF3B2	99	99.683	Homo_sapiens
MGP_CAROLIEiJ_G0022539	Sf3b2	95	68.671	ENSAPOG00000001974	sf3b2	80	73.895	Acanthochromis_polyacanthus
MGP_CAROLIEiJ_G0022539	Sf3b2	100	95.222	ENSAMEG00000017206	SF3B2	100	95.222	Ailuropoda_melanoleuca
MGP_CAROLIEiJ_G0022539	Sf3b2	97	67.391	ENSACIG00000000624	sf3b2	87	74.177	Amphilophus_citrinellus
MGP_CAROLIEiJ_G0022539	Sf3b2	97	69.179	ENSAOCG00000009207	sf3b2	84	74.335	Amphiprion_ocellaris
MGP_CAROLIEiJ_G0022539	Sf3b2	97	69.032	ENSAPEG00000002762	sf3b2	85	72.836	Amphiprion_percula
MGP_CAROLIEiJ_G0022539	Sf3b2	100	65.427	ENSACAG00000008615	SF3B2	100	66.593	Anolis_carolinensis
MGP_CAROLIEiJ_G0022539	Sf3b2	100	96.928	ENSANAG00000029120	SF3B2	100	96.928	Aotus_nancymaae
MGP_CAROLIEiJ_G0022539	Sf3b2	86	71.613	ENSACLG00000014771	sf3b2	85	74.163	Astatotilapia_calliptera
MGP_CAROLIEiJ_G0022539	Sf3b2	84	70.871	ENSAMXG00000007929	sf3b2	86	78.268	Astyanax_mexicanus
MGP_CAROLIEiJ_G0022539	Sf3b2	100	95.106	ENSBTAG00000002778	SF3B2	100	95.106	Bos_taurus
MGP_CAROLIEiJ_G0022539	Sf3b2	60	51.060	WBGene00021004	sftb-2	89	51.825	Caenorhabditis_elegans
MGP_CAROLIEiJ_G0022539	Sf3b2	100	97.042	ENSCJAG00000001656	SF3B2	100	97.042	Callithrix_jacchus
MGP_CAROLIEiJ_G0022539	Sf3b2	100	95.323	ENSCAFG00000013033	SF3B2	100	95.323	Canis_familiaris
MGP_CAROLIEiJ_G0022539	Sf3b2	100	95.323	ENSCAFG00020015382	SF3B2	100	95.323	Canis_lupus_dingo
MGP_CAROLIEiJ_G0022539	Sf3b2	100	95.212	ENSCHIG00000011211	SF3B2	100	95.212	Capra_hircus
MGP_CAROLIEiJ_G0022539	Sf3b2	100	97.153	ENSTSYG00000000959	SF3B2	100	97.153	Carlito_syrichta
MGP_CAROLIEiJ_G0022539	Sf3b2	61	95.789	ENSCAPG00000006065	SF3B2	93	100.000	Cavia_aperea
MGP_CAROLIEiJ_G0022539	Sf3b2	91	96.482	ENSCPOG00000008294	SF3B2	100	96.482	Cavia_porcellus
MGP_CAROLIEiJ_G0022539	Sf3b2	100	97.042	ENSCCAG00000035256	SF3B2	100	97.042	Cebus_capucinus
MGP_CAROLIEiJ_G0022539	Sf3b2	100	97.039	ENSCATG00000042240	SF3B2	100	97.039	Cercocebus_atys
MGP_CAROLIEiJ_G0022539	Sf3b2	100	97.608	ENSCLAG00000016852	SF3B2	100	97.608	Chinchilla_lanigera
MGP_CAROLIEiJ_G0022539	Sf3b2	100	95.196	ENSCSAG00000008121	SF3B2	100	95.196	Chlorocebus_sabaeus
MGP_CAROLIEiJ_G0022539	Sf3b2	91	99.485	ENSCHOG00000001476	SF3B2	77	91.237	Choloepus_hoffmanni
MGP_CAROLIEiJ_G0022539	Sf3b2	85	80.990	ENSCPBG00000022465	SF3B2	87	86.677	Chrysemys_picta_bellii
MGP_CAROLIEiJ_G0022539	Sf3b2	74	59.908	ENSCING00000005665	-	99	60.535	Ciona_intestinalis
MGP_CAROLIEiJ_G0022539	Sf3b2	71	60.787	ENSCSAVG00000002029	-	99	59.810	Ciona_savignyi
MGP_CAROLIEiJ_G0022539	Sf3b2	100	97.039	ENSCANG00000039680	SF3B2	100	97.039	Colobus_angolensis_palliatus
MGP_CAROLIEiJ_G0022539	Sf3b2	100	98.633	ENSCGRG00001015741	Sf3b2	100	98.633	Cricetulus_griseus_chok1gshd
MGP_CAROLIEiJ_G0022539	Sf3b2	100	98.633	ENSCGRG00000018110	Sf3b2	100	98.633	Cricetulus_griseus_crigri
MGP_CAROLIEiJ_G0022539	Sf3b2	75	74.551	ENSCSEG00000000230	sf3b2	78	78.549	Cynoglossus_semilaevis
MGP_CAROLIEiJ_G0022539	Sf3b2	97	68.372	ENSCVAG00000003357	sf3b2	85	73.572	Cyprinodon_variegatus
MGP_CAROLIEiJ_G0022539	Sf3b2	82	73.670	ENSDARG00000018049	sf3b2	86	72.456	Danio_rerio
MGP_CAROLIEiJ_G0022539	Sf3b2	100	93.541	ENSDNOG00000009484	SF3B2	100	93.541	Dasypus_novemcinctus
MGP_CAROLIEiJ_G0022539	Sf3b2	100	96.928	ENSDORG00000002495	Sf3b2	100	96.928	Dipodomys_ordii
MGP_CAROLIEiJ_G0022539	Sf3b2	84	88.889	ENSETEG00000020284	SF3B2	85	88.759	Echinops_telfairi
MGP_CAROLIEiJ_G0022539	Sf3b2	98	57.313	ENSEBUG00000013703	sf3b2	99	59.495	Eptatretus_burgeri
MGP_CAROLIEiJ_G0022539	Sf3b2	100	95.106	ENSEASG00005004508	SF3B2	100	95.106	Equus_asinus_asinus
MGP_CAROLIEiJ_G0022539	Sf3b2	100	95.106	ENSECAG00000024461	SF3B2	100	95.106	Equus_caballus
MGP_CAROLIEiJ_G0022539	Sf3b2	62	100.000	ENSEEUG00000014278	-	60	100.000	Erinaceus_europaeus
MGP_CAROLIEiJ_G0022539	Sf3b2	97	65.049	ENSELUG00000005586	sf3b2	86	70.537	Esox_lucius
MGP_CAROLIEiJ_G0022539	Sf3b2	100	97.276	ENSFCAG00000013289	SF3B2	100	97.276	Felis_catus
MGP_CAROLIEiJ_G0022539	Sf3b2	80	70.804	ENSFALG00000014653	SF3B2	98	69.111	Ficedula_albicollis
MGP_CAROLIEiJ_G0022539	Sf3b2	100	96.829	ENSFDAG00000019806	SF3B2	100	96.829	Fukomys_damarensis
MGP_CAROLIEiJ_G0022539	Sf3b2	84	71.391	ENSFHEG00000020968	sf3b2	86	72.090	Fundulus_heteroclitus
MGP_CAROLIEiJ_G0022539	Sf3b2	74	78.321	ENSGMOG00000012131	sf3b2	96	80.787	Gadus_morhua
MGP_CAROLIEiJ_G0022539	Sf3b2	97	69.187	ENSGAFG00000001675	sf3b2	86	73.123	Gambusia_affinis
MGP_CAROLIEiJ_G0022539	Sf3b2	74	79.231	ENSGACG00000019012	sf3b2	96	80.159	Gasterosteus_aculeatus
MGP_CAROLIEiJ_G0022539	Sf3b2	100	79.661	ENSGAGG00000023916	SF3B2	100	78.685	Gopherus_agassizii
MGP_CAROLIEiJ_G0022539	Sf3b2	100	95.923	ENSGGOG00000028448	SF3B2	100	99.717	Gorilla_gorilla
MGP_CAROLIEiJ_G0022539	Sf3b2	86	71.742	ENSHBUG00000017349	sf3b2	85	74.163	Haplochromis_burtoni
MGP_CAROLIEiJ_G0022539	Sf3b2	100	97.608	ENSHGLG00000010807	SF3B2	100	97.608	Heterocephalus_glaber_female
MGP_CAROLIEiJ_G0022539	Sf3b2	100	97.608	ENSHGLG00100006361	SF3B2	100	97.608	Heterocephalus_glaber_male
MGP_CAROLIEiJ_G0022539	Sf3b2	97	65.459	ENSHCOG00000016203	sf3b2	97	64.853	Hippocampus_comes
MGP_CAROLIEiJ_G0022539	Sf3b2	97	66.215	ENSIPUG00000009383	sf3b2	83	71.816	Ictalurus_punctatus
MGP_CAROLIEiJ_G0022539	Sf3b2	100	97.722	ENSSTOG00000028892	SF3B2	100	97.722	Ictidomys_tridecemlineatus
MGP_CAROLIEiJ_G0022539	Sf3b2	100	97.389	ENSJJAG00000018193	Sf3b2	100	97.389	Jaculus_jaculus
MGP_CAROLIEiJ_G0022539	Sf3b2	60	87.970	ENSKMAG00000020181	sf3b2	83	71.946	Kryptolebias_marmoratus
MGP_CAROLIEiJ_G0022539	Sf3b2	97	67.128	ENSLBEG00000027739	sf3b2	88	78.425	Labrus_bergylta
MGP_CAROLIEiJ_G0022539	Sf3b2	79	81.034	ENSLACG00000010429	SF3B2	98	72.328	Latimeria_chalumnae
MGP_CAROLIEiJ_G0022539	Sf3b2	100	96.368	ENSLAFG00000002128	SF3B2	100	96.368	Loxodonta_africana
MGP_CAROLIEiJ_G0022539	Sf3b2	100	96.928	ENSMFAG00000003064	SF3B2	100	96.928	Macaca_fascicularis
MGP_CAROLIEiJ_G0022539	Sf3b2	100	92.597	ENSMMUG00000011743	SF3B2	100	92.597	Macaca_mulatta
MGP_CAROLIEiJ_G0022539	Sf3b2	100	95.706	ENSMNEG00000034437	SF3B2	100	95.706	Macaca_nemestrina
MGP_CAROLIEiJ_G0022539	Sf3b2	100	95.593	ENSMLEG00000029373	SF3B2	100	95.593	Mandrillus_leucophaeus
MGP_CAROLIEiJ_G0022539	Sf3b2	84	71.778	ENSMAMG00000014103	sf3b2	86	73.997	Mastacembelus_armatus
MGP_CAROLIEiJ_G0022539	Sf3b2	86	71.613	ENSMZEG00005020789	sf3b2	84	74.163	Maylandia_zebra
MGP_CAROLIEiJ_G0022539	Sf3b2	64	99.510	ENSMAUG00000017040	Sf3b2	100	99.510	Mesocricetus_auratus
MGP_CAROLIEiJ_G0022539	Sf3b2	100	91.416	ENSMICG00000016942	-	97	91.304	Microcebus_murinus
MGP_CAROLIEiJ_G0022539	Sf3b2	100	96.697	ENSMICG00000008565	-	100	96.697	Microcebus_murinus
MGP_CAROLIEiJ_G0022539	Sf3b2	100	98.292	ENSMOCG00000003136	Sf3b2	100	98.292	Microtus_ochrogaster
MGP_CAROLIEiJ_G0022539	Sf3b2	97	65.801	ENSMMOG00000012928	sf3b2	86	71.765	Mola_mola
MGP_CAROLIEiJ_G0022539	Sf3b2	72	88.189	ENSMODG00000025020	-	99	87.087	Monodelphis_domestica
MGP_CAROLIEiJ_G0022539	Sf3b2	85	90.728	ENSMODG00000008490	-	92	92.573	Monodelphis_domestica
MGP_CAROLIEiJ_G0022539	Sf3b2	86	69.452	ENSMALG00000015137	sf3b2	76	78.681	Monopterus_albus
MGP_CAROLIEiJ_G0022539	Sf3b2	100	98.975	ENSMUSG00000024853	Sf3b2	100	98.975	Mus_musculus
MGP_CAROLIEiJ_G0022539	Sf3b2	100	98.292	MGP_PahariEiJ_G0014036	Sf3b2	100	98.292	Mus_pahari
MGP_CAROLIEiJ_G0022539	Sf3b2	100	98.861	MGP_SPRETEiJ_G0023453	Sf3b2	100	98.861	Mus_spretus
MGP_CAROLIEiJ_G0022539	Sf3b2	100	95.212	ENSMPUG00000011349	SF3B2	100	95.212	Mustela_putorius_furo
MGP_CAROLIEiJ_G0022539	Sf3b2	100	94.105	ENSMLUG00000011136	SF3B2	100	94.105	Myotis_lucifugus
MGP_CAROLIEiJ_G0022539	Sf3b2	100	97.608	ENSNGAG00000012103	Sf3b2	100	97.608	Nannospalax_galili
MGP_CAROLIEiJ_G0022539	Sf3b2	100	90.981	ENSNLEG00000006007	SF3B2	100	90.123	Nomascus_leucogenys
MGP_CAROLIEiJ_G0022539	Sf3b2	76	93.466	ENSMEUG00000000019	SF3B2	80	93.466	Notamacropus_eugenii
MGP_CAROLIEiJ_G0022539	Sf3b2	100	93.622	ENSODEG00000017764	SF3B2	100	93.622	Octodon_degus
MGP_CAROLIEiJ_G0022539	Sf3b2	97	67.007	ENSONIG00000013068	sf3b2	87	74.538	Oreochromis_niloticus
MGP_CAROLIEiJ_G0022539	Sf3b2	87	80.977	ENSOANG00000012482	SF3B2	97	81.041	Ornithorhynchus_anatinus
MGP_CAROLIEiJ_G0022539	Sf3b2	62	64.510	ENSOCUG00000024154	-	100	64.695	Oryctolagus_cuniculus
MGP_CAROLIEiJ_G0022539	Sf3b2	100	90.604	ENSOCUG00000015722	-	100	90.045	Oryctolagus_cuniculus
MGP_CAROLIEiJ_G0022539	Sf3b2	97	66.478	ENSORLG00000008235	sf3b2	85	71.879	Oryzias_latipes
MGP_CAROLIEiJ_G0022539	Sf3b2	97	66.478	ENSORLG00020005357	sf3b2	97	65.979	Oryzias_latipes_hni
MGP_CAROLIEiJ_G0022539	Sf3b2	97	66.591	ENSORLG00015022454	sf3b2	82	77.638	Oryzias_latipes_hsok
MGP_CAROLIEiJ_G0022539	Sf3b2	97	65.984	ENSOMEG00000017480	sf3b2	84	73.343	Oryzias_melastigma
MGP_CAROLIEiJ_G0022539	Sf3b2	100	88.939	ENSOGAG00000005799	SF3B2	100	89.497	Otolemur_garnettii
MGP_CAROLIEiJ_G0022539	Sf3b2	100	93.552	ENSOARG00000002125	SF3B2	100	94.715	Ovis_aries
MGP_CAROLIEiJ_G0022539	Sf3b2	100	95.084	ENSPPAG00000007359	SF3B2	100	95.084	Pan_paniscus
MGP_CAROLIEiJ_G0022539	Sf3b2	100	97.276	ENSPPRG00000013334	SF3B2	100	97.276	Panthera_pardus
MGP_CAROLIEiJ_G0022539	Sf3b2	100	97.162	ENSPTIG00000015022	SF3B2	100	97.162	Panthera_tigris_altaica
MGP_CAROLIEiJ_G0022539	Sf3b2	100	95.084	ENSPTRG00000003912	SF3B2	100	95.084	Pan_troglodytes
MGP_CAROLIEiJ_G0022539	Sf3b2	100	97.039	ENSPANG00000008593	SF3B2	100	97.039	Papio_anubis
MGP_CAROLIEiJ_G0022539	Sf3b2	97	67.156	ENSPKIG00000016576	sf3b2	86	80.885	Paramormyrops_kingsleyae
MGP_CAROLIEiJ_G0022539	Sf3b2	93	81.062	ENSPSIG00000003158	SF3B2	97	83.400	Pelodiscus_sinensis
MGP_CAROLIEiJ_G0022539	Sf3b2	84	66.579	ENSPMGG00000000819	sf3b2	84	67.068	Periophthalmus_magnuspinnatus
MGP_CAROLIEiJ_G0022539	Sf3b2	100	98.405	ENSPEMG00000015437	Sf3b2	100	98.405	Peromyscus_maniculatus_bairdii
MGP_CAROLIEiJ_G0022539	Sf3b2	93	84.275	ENSPEMG00000015451	-	100	84.275	Peromyscus_maniculatus_bairdii
MGP_CAROLIEiJ_G0022539	Sf3b2	85	90.053	ENSPCIG00000008381	SF3B2	100	89.333	Phascolarctos_cinereus
MGP_CAROLIEiJ_G0022539	Sf3b2	97	69.460	ENSPFOG00000002552	sf3b2	86	73.254	Poecilia_formosa
MGP_CAROLIEiJ_G0022539	Sf3b2	97	69.575	ENSPLAG00000001471	sf3b2	86	73.123	Poecilia_latipinna
MGP_CAROLIEiJ_G0022539	Sf3b2	97	68.197	ENSPMEG00000013180	sf3b2	86	73.219	Poecilia_mexicana
MGP_CAROLIEiJ_G0022539	Sf3b2	84	72.127	ENSPREG00000002665	sf3b2	86	72.763	Poecilia_reticulata
MGP_CAROLIEiJ_G0022539	Sf3b2	74	91.952	ENSPPYG00000003034	-	99	91.952	Pongo_abelii
MGP_CAROLIEiJ_G0022539	Sf3b2	100	94.209	ENSPCAG00000005129	SF3B2	100	94.209	Procavia_capensis
MGP_CAROLIEiJ_G0022539	Sf3b2	100	96.811	ENSPCOG00000025375	SF3B2	100	96.811	Propithecus_coquereli
MGP_CAROLIEiJ_G0022539	Sf3b2	56	99.299	ENSPVAG00000016975	-	55	99.299	Pteropus_vampyrus
MGP_CAROLIEiJ_G0022539	Sf3b2	54	99.561	ENSPVAG00000005466	-	80	99.561	Pteropus_vampyrus
MGP_CAROLIEiJ_G0022539	Sf3b2	81	73.269	ENSPNYG00000023594	sf3b2	92	74.238	Pundamilia_nyererei
MGP_CAROLIEiJ_G0022539	Sf3b2	86	70.140	ENSPNAG00000001891	sf3b2	81	72.752	Pygocentrus_nattereri
MGP_CAROLIEiJ_G0022539	Sf3b2	100	98.292	ENSRNOG00000020412	Sf3b2	100	98.292	Rattus_norvegicus
MGP_CAROLIEiJ_G0022539	Sf3b2	100	96.925	ENSRBIG00000034065	SF3B2	100	96.925	Rhinopithecus_bieti
MGP_CAROLIEiJ_G0022539	Sf3b2	100	96.925	ENSRROG00000034496	SF3B2	100	96.925	Rhinopithecus_roxellana
MGP_CAROLIEiJ_G0022539	Sf3b2	100	91.796	ENSSBOG00000026337	SF3B2	100	92.691	Saimiri_boliviensis_boliviensis
MGP_CAROLIEiJ_G0022539	Sf3b2	85	85.640	ENSSHAG00000010933	-	100	83.850	Sarcophilus_harrisii
MGP_CAROLIEiJ_G0022539	Sf3b2	96	69.419	ENSSHAG00000018043	-	100	70.081	Sarcophilus_harrisii
MGP_CAROLIEiJ_G0022539	Sf3b2	97	66.409	ENSSFOG00015021125	sf3b2	81	74.966	Scleropages_formosus
MGP_CAROLIEiJ_G0022539	Sf3b2	60	87.476	ENSSMAG00000004079	sf3b2	88	73.377	Scophthalmus_maximus
MGP_CAROLIEiJ_G0022539	Sf3b2	60	87.666	ENSSDUG00000008499	sf3b2	85	70.801	Seriola_dumerili
MGP_CAROLIEiJ_G0022539	Sf3b2	60	88.235	ENSSLDG00000006838	sf3b2	86	75.033	Seriola_lalandi_dorsalis
MGP_CAROLIEiJ_G0022539	Sf3b2	52	99.206	ENSSARG00000003707	-	53	99.206	Sorex_araneus
MGP_CAROLIEiJ_G0022539	Sf3b2	100	81.236	ENSSPUG00000009198	SF3B2	85	83.910	Sphenodon_punctatus
MGP_CAROLIEiJ_G0022539	Sf3b2	97	66.483	ENSSPAG00000004406	sf3b2	86	73.072	Stegastes_partitus
MGP_CAROLIEiJ_G0022539	Sf3b2	100	94.655	ENSSSCG00000012957	SF3B2	100	94.655	Sus_scrofa
MGP_CAROLIEiJ_G0022539	Sf3b2	97	54.805	ENSTRUG00000007611	sf3b2	88	72.214	Takifugu_rubripes
MGP_CAROLIEiJ_G0022539	Sf3b2	97	65.698	ENSTNIG00000007441	sf3b2	88	69.344	Tetraodon_nigroviridis
MGP_CAROLIEiJ_G0022539	Sf3b2	91	94.186	ENSTBEG00000004258	SF3B2	82	99.286	Tupaia_belangeri
MGP_CAROLIEiJ_G0022539	Sf3b2	100	94.878	ENSTTRG00000014339	SF3B2	100	94.878	Tursiops_truncatus
MGP_CAROLIEiJ_G0022539	Sf3b2	100	93.437	ENSUAMG00000020754	SF3B2	99	94.505	Ursus_americanus
MGP_CAROLIEiJ_G0022539	Sf3b2	100	95.434	ENSUMAG00000010994	SF3B2	100	95.434	Ursus_maritimus
MGP_CAROLIEiJ_G0022539	Sf3b2	66	99.153	ENSVPAG00000008695	SF3B2	63	99.153	Vicugna_pacos
MGP_CAROLIEiJ_G0022539	Sf3b2	100	95.212	ENSVVUG00000027029	SF3B2	100	95.212	Vulpes_vulpes
MGP_CAROLIEiJ_G0022539	Sf3b2	87	71.778	ENSXETG00000008422	sf3b2	87	78.102	Xenopus_tropicalis
MGP_CAROLIEiJ_G0022539	Sf3b2	72	78.571	ENSXCOG00000008943	sf3b2	84	77.937	Xiphophorus_couchianus
MGP_CAROLIEiJ_G0022539	Sf3b2	60	87.547	ENSXMAG00000008467	sf3b2	86	72.215	Xiphophorus_maculatus