EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_CAROLIEiJ_G0022560 (Gene tree)
Gene ID: 110285314
Gene Symbol: Rnaseh2c
Alias: 1500026D16Rik
Full Name: ribonuclease H2 subunit C
Gene Type: protein_coding
Species: Mus_caroli
Status: putative
Strand: Plus strand
Length: 1566 bases
Position: chr19:2345501-2347066
Accession: 110285314
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CAROLIEiJ_P0047639	RNase_H2_suC	PF08615.11	2.5e-23	1	1
MGP_CAROLIEiJ_P0047642	RNase_H2_suC	PF08615.11	7.9e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CAROLIEiJ_T0047641	-	770	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0047639	-	1127	-	MGP_CAROLIEiJ_P0047639	166 (aa)	XP_021007044	UPI000A3191F8
MGP_CAROLIEiJ_T0047643	-	272	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0047642	-	394	-	MGP_CAROLIEiJ_P0047642	87 (aa)	-	-
MGP_CAROLIEiJ_T0047640	-	867	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_CAROLIEiJ_G0022560's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CAROLIEiJ_G0022560's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_CAROLIEiJ_G0022560	Rnaseh2c	99	66.279	ENSG00000172922	RNASEH2C	100	65.060	Homo_sapiens
MGP_CAROLIEiJ_G0022560	Rnaseh2c	100	65.116	ENSAMEG00000017348	RNASEH2C	100	65.116	Ailuropoda_melanoleuca
MGP_CAROLIEiJ_G0022560	Rnaseh2c	99	69.767	ENSANAG00000032535	RNASEH2C	100	66.867	Aotus_nancymaae
MGP_CAROLIEiJ_G0022560	Rnaseh2c	100	63.855	ENSBTAG00000005577	RNASEH2C	100	63.855	Bos_taurus
MGP_CAROLIEiJ_G0022560	Rnaseh2c	99	67.442	ENSCJAG00000001965	RNASEH2C	100	65.060	Callithrix_jacchus
MGP_CAROLIEiJ_G0022560	Rnaseh2c	100	66.272	ENSCAFG00000013292	RNASEH2C	100	66.272	Canis_familiaris
MGP_CAROLIEiJ_G0022560	Rnaseh2c	100	66.272	ENSCAFG00020015077	RNASEH2C	100	66.272	Canis_lupus_dingo
MGP_CAROLIEiJ_G0022560	Rnaseh2c	100	63.855	ENSCHIG00000013681	RNASEH2C	100	63.855	Capra_hircus
MGP_CAROLIEiJ_G0022560	Rnaseh2c	99	67.442	ENSTSYG00000028658	-	65	71.296	Carlito_syrichta
MGP_CAROLIEiJ_G0022560	Rnaseh2c	100	66.467	ENSCPOG00000013696	RNASEH2C	100	66.467	Cavia_porcellus
MGP_CAROLIEiJ_G0022560	Rnaseh2c	99	68.605	ENSCCAG00000025461	RNASEH2C	100	66.265	Cebus_capucinus
MGP_CAROLIEiJ_G0022560	Rnaseh2c	99	71.341	ENSCLAG00000016534	RNASEH2C	99	71.341	Chinchilla_lanigera
MGP_CAROLIEiJ_G0022560	Rnaseh2c	99	68.605	ENSCSAG00000007985	RNASEH2C	100	66.265	Chlorocebus_sabaeus
MGP_CAROLIEiJ_G0022560	Rnaseh2c	99	67.442	ENSCANG00000039373	RNASEH2C	100	65.060	Colobus_angolensis_palliatus
MGP_CAROLIEiJ_G0022560	Rnaseh2c	99	89.535	ENSCGRG00001015383	Rnaseh2c	100	84.940	Cricetulus_griseus_chok1gshd
MGP_CAROLIEiJ_G0022560	Rnaseh2c	99	89.535	ENSCGRG00000012179	Rnaseh2c	100	84.940	Cricetulus_griseus_crigri
MGP_CAROLIEiJ_G0022560	Rnaseh2c	100	66.864	ENSDNOG00000035155	RNASEH2C	99	66.864	Dasypus_novemcinctus
MGP_CAROLIEiJ_G0022560	Rnaseh2c	100	69.880	ENSDORG00000023624	Rnaseh2c	100	69.880	Dipodomys_ordii
MGP_CAROLIEiJ_G0022560	Rnaseh2c	99	57.303	ENSETEG00000020048	-	100	63.281	Echinops_telfairi
MGP_CAROLIEiJ_G0022560	Rnaseh2c	60	59.000	ENSETEG00000015293	-	94	59.000	Echinops_telfairi
MGP_CAROLIEiJ_G0022560	Rnaseh2c	100	62.651	ENSEASG00005004302	RNASEH2C	100	62.651	Equus_asinus_asinus
MGP_CAROLIEiJ_G0022560	Rnaseh2c	100	63.253	ENSECAG00000017289	RNASEH2C	100	63.253	Equus_caballus
MGP_CAROLIEiJ_G0022560	Rnaseh2c	100	69.880	ENSFCAG00000044095	RNASEH2C	100	69.880	Felis_catus
MGP_CAROLIEiJ_G0022560	Rnaseh2c	99	65.116	ENSFDAG00000011974	RNASEH2C	97	60.819	Fukomys_damarensis
MGP_CAROLIEiJ_G0022560	Rnaseh2c	100	68.072	ENSHGLG00000013478	RNASEH2C	100	68.072	Heterocephalus_glaber_female
MGP_CAROLIEiJ_G0022560	Rnaseh2c	100	68.072	ENSHGLG00100019352	RNASEH2C	100	68.072	Heterocephalus_glaber_male
MGP_CAROLIEiJ_G0022560	Rnaseh2c	100	67.052	ENSSTOG00000019410	RNASEH2C	100	67.052	Ictidomys_tridecemlineatus
MGP_CAROLIEiJ_G0022560	Rnaseh2c	99	72.093	ENSJJAG00000019320	Rnaseh2c	94	75.000	Jaculus_jaculus
MGP_CAROLIEiJ_G0022560	Rnaseh2c	100	63.314	ENSLAFG00000015641	RNASEH2C	100	63.314	Loxodonta_africana
MGP_CAROLIEiJ_G0022560	Rnaseh2c	99	68.605	ENSMFAG00000038096	-	100	66.265	Macaca_fascicularis
MGP_CAROLIEiJ_G0022560	Rnaseh2c	99	66.279	ENSMFAG00000042754	-	100	65.060	Macaca_fascicularis
MGP_CAROLIEiJ_G0022560	Rnaseh2c	99	68.605	ENSMMUG00000016234	-	100	66.265	Macaca_mulatta
MGP_CAROLIEiJ_G0022560	Rnaseh2c	99	68.605	ENSMMUG00000019837	RNASEH2C	74	63.190	Macaca_mulatta
MGP_CAROLIEiJ_G0022560	Rnaseh2c	99	68.605	ENSMNEG00000040939	RNASEH2C	100	66.265	Macaca_nemestrina
MGP_CAROLIEiJ_G0022560	Rnaseh2c	99	87.209	ENSMAUG00000016346	Rnaseh2c	100	85.542	Mesocricetus_auratus
MGP_CAROLIEiJ_G0022560	Rnaseh2c	100	68.862	ENSMICG00000008882	RNASEH2C	100	68.862	Microcebus_murinus
MGP_CAROLIEiJ_G0022560	Rnaseh2c	99	83.721	ENSMOCG00000013231	Rnaseh2c	100	82.530	Microtus_ochrogaster
MGP_CAROLIEiJ_G0022560	Rnaseh2c	99	44.186	ENSMODG00000009547	-	90	49.333	Monodelphis_domestica
MGP_CAROLIEiJ_G0022560	Rnaseh2c	100	96.552	ENSMUSG00000024925	Rnaseh2c	100	96.386	Mus_musculus
MGP_CAROLIEiJ_G0022560	Rnaseh2c	100	95.181	MGP_PahariEiJ_G0014057	Rnaseh2c	100	95.181	Mus_pahari
MGP_CAROLIEiJ_G0022560	Rnaseh2c	100	60.694	ENSMPUG00000011629	RNASEH2C	100	62.209	Mustela_putorius_furo
MGP_CAROLIEiJ_G0022560	Rnaseh2c	100	62.130	ENSMLUG00000008777	RNASEH2C	100	62.130	Myotis_lucifugus
MGP_CAROLIEiJ_G0022560	Rnaseh2c	100	66.867	ENSNGAG00000020391	Rnaseh2c	100	66.867	Nannospalax_galili
MGP_CAROLIEiJ_G0022560	Rnaseh2c	99	68.605	ENSNLEG00000005833	-	100	65.060	Nomascus_leucogenys
MGP_CAROLIEiJ_G0022560	Rnaseh2c	98	44.785	ENSMEUG00000006205	-	100	44.785	Notamacropus_eugenii
MGP_CAROLIEiJ_G0022560	Rnaseh2c	100	68.072	ENSODEG00000017806	RNASEH2C	100	68.072	Octodon_degus
MGP_CAROLIEiJ_G0022560	Rnaseh2c	100	67.630	ENSOGAG00000014128	RNASEH2C	100	67.630	Otolemur_garnettii
MGP_CAROLIEiJ_G0022560	Rnaseh2c	100	63.253	ENSOARG00000017675	RNASEH2C	100	63.253	Ovis_aries
MGP_CAROLIEiJ_G0022560	Rnaseh2c	99	67.442	ENSPPAG00000042592	-	84	62.275	Pan_paniscus
MGP_CAROLIEiJ_G0022560	Rnaseh2c	100	69.277	ENSPPRG00000000774	RNASEH2C	100	69.277	Panthera_pardus
MGP_CAROLIEiJ_G0022560	Rnaseh2c	100	66.265	ENSPTIG00000011677	RNASEH2C	100	66.265	Panthera_tigris_altaica
MGP_CAROLIEiJ_G0022560	Rnaseh2c	99	67.442	ENSPTRG00000038742	RNASEH2C	100	65.663	Pan_troglodytes
MGP_CAROLIEiJ_G0022560	Rnaseh2c	99	68.605	ENSPANG00000015965	RNASEH2C	66	63.030	Papio_anubis
MGP_CAROLIEiJ_G0022560	Rnaseh2c	99	89.535	ENSPEMG00000018577	Rnaseh2c	100	85.542	Peromyscus_maniculatus_bairdii
MGP_CAROLIEiJ_G0022560	Rnaseh2c	99	67.442	ENSPPYG00000003051	RNASEH2C	100	64.458	Pongo_abelii
MGP_CAROLIEiJ_G0022560	Rnaseh2c	100	61.628	ENSPCAG00000007887	RNASEH2C	100	61.628	Procavia_capensis
MGP_CAROLIEiJ_G0022560	Rnaseh2c	100	67.665	ENSPCOG00000021092	RNASEH2C	100	67.665	Propithecus_coquereli
MGP_CAROLIEiJ_G0022560	Rnaseh2c	100	65.663	ENSPVAG00000016950	RNASEH2C	100	65.663	Pteropus_vampyrus
MGP_CAROLIEiJ_G0022560	Rnaseh2c	99	94.186	ENSRNOG00000020700	Rnaseh2c	100	92.771	Rattus_norvegicus
MGP_CAROLIEiJ_G0022560	Rnaseh2c	99	69.767	ENSRBIG00000040124	RNASEH2C	64	64.780	Rhinopithecus_bieti
MGP_CAROLIEiJ_G0022560	Rnaseh2c	99	69.767	ENSRROG00000044910	RNASEH2C	99	65.190	Rhinopithecus_roxellana
MGP_CAROLIEiJ_G0022560	Rnaseh2c	100	66.867	ENSSBOG00000034781	RNASEH2C	100	66.867	Saimiri_boliviensis_boliviensis
MGP_CAROLIEiJ_G0022560	Rnaseh2c	100	63.095	ENSSSCG00000012979	RNASEH2C	100	63.095	Sus_scrofa
MGP_CAROLIEiJ_G0022560	Rnaseh2c	97	48.485	ENSTTRG00000016928	RNASEH2C	99	48.485	Tursiops_truncatus
MGP_CAROLIEiJ_G0022560	Rnaseh2c	100	64.535	ENSUAMG00000020793	RNASEH2C	100	64.535	Ursus_americanus
MGP_CAROLIEiJ_G0022560	Rnaseh2c	100	63.953	ENSUMAG00000010791	RNASEH2C	100	63.953	Ursus_maritimus
MGP_CAROLIEiJ_G0022560	Rnaseh2c	99	61.628	ENSVPAG00000006579	RNASEH2C	100	57.595	Vicugna_pacos
MGP_CAROLIEiJ_G0022560	Rnaseh2c	99	59.551	ENSVVUG00000027076	RNASEH2C	77	62.346	Vulpes_vulpes