EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
MGP_CAROLIEiJ_G0022607 (Gene tree)
Gene ID
110285264
Gene Symbol
Sf1
Alias
CW17R|MZFM|WBP4|Zfp162
Full Name
splicing factor 1
Gene Type
protein_coding
Species
Mus_caroli
Status
putative
Strand
Plus strand
Length
14367 bases
Position
chr19:3152490-3166856
Accession
110285264
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
MGP_CAROLIEiJ_P0047835KH_1PF00013.299.1e-0811
MGP_CAROLIEiJ_P0047831KH_1PF00013.293.9e-0711
MGP_CAROLIEiJ_P0047828KH_1PF00013.294.1e-0711
MGP_CAROLIEiJ_P0047827KH_1PF00013.294.6e-0711
MGP_CAROLIEiJ_P0047829KH_1PF00013.294.6e-0711
MGP_CAROLIEiJ_P0047835zf-CCHCPF00098.230.0001311
MGP_CAROLIEiJ_P0047828zf-CCHCPF00098.230.0002411
MGP_CAROLIEiJ_P0047831zf-CCHCPF00098.230.0002611
MGP_CAROLIEiJ_P0047829zf-CCHCPF00098.230.0003211
MGP_CAROLIEiJ_P0047827zf-CCHCPF00098.230.0003211
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
MGP_CAROLIEiJ_T0047829-2282-MGP_CAROLIEiJ_P0047829638 (aa)-UPI0000F221F0
MGP_CAROLIEiJ_T0047828-2853-MGP_CAROLIEiJ_P0047828571 (aa)XP_021006949UPI00015AA155
MGP_CAROLIEiJ_T0047838-404--- (aa)--
MGP_CAROLIEiJ_T0047839-906-MGP_CAROLIEiJ_P0047839224 (aa)--
MGP_CAROLIEiJ_T0047832-3220-MGP_CAROLIEiJ_P0047832110 (aa)--
MGP_CAROLIEiJ_T0047833-866--- (aa)--
MGP_CAROLIEiJ_T0047830-486--- (aa)--
MGP_CAROLIEiJ_T0047831-2639-MGP_CAROLIEiJ_P0047831548 (aa)XP_021006952UPI00001EC8CA
MGP_CAROLIEiJ_T0047836-455--- (aa)--
MGP_CAROLIEiJ_T0047837-785--- (aa)--
MGP_CAROLIEiJ_T0047827-4377XM_021151283MGP_CAROLIEiJ_P0047827639 (aa)XP_021006942UPI00005AC5E9
MGP_CAROLIEiJ_T0047835-1000-MGP_CAROLIEiJ_P0047835267 (aa)-UPI0001889B98
MGP_CAROLIEiJ_T0047834-727-MGP_CAROLIEiJ_P004783484 (aa)--
MGP_CAROLIEiJ_T0047841-513-MGP_CAROLIEiJ_P0047841170 (aa)--
MGP_CAROLIEiJ_T0047840-755-MGP_CAROLIEiJ_P0047840200 (aa)-UPI0001889B96
Gene Model
Click here to download MGP_CAROLIEiJ_G0022607's gene model file
Protein-Protein Interaction (PPI)

Clik here to download MGP_CAROLIEiJ_G0022607's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
MGP_CAROLIEiJ_G0022607Sf19994.737ENSAPOG00000012341sf16076.047Acanthochromis_polyacanthus
MGP_CAROLIEiJ_G0022607Sf110099.625ENSAMEG00000017828SF110091.602Ailuropoda_melanoleuca
MGP_CAROLIEiJ_G0022607Sf19993.609ENSACIG00000016514sf16278.282Amphilophus_citrinellus
MGP_CAROLIEiJ_G0022607Sf19994.737ENSAOCG00000010934sf16176.047Amphiprion_ocellaris
MGP_CAROLIEiJ_G0022607Sf19994.737ENSAPEG00000009498sf16176.047Amphiprion_percula
MGP_CAROLIEiJ_G0022607Sf19995.113ENSATEG00000001894sf16077.488Anabas_testudineus
MGP_CAROLIEiJ_G0022607Sf110086.517ENSANAG00000022607-9986.899Aotus_nancymaae
MGP_CAROLIEiJ_G0022607Sf110099.625ENSANAG00000026664-10099.218Aotus_nancymaae
MGP_CAROLIEiJ_G0022607Sf19995.489ENSACLG00000007633sf16178.177Astatotilapia_calliptera
MGP_CAROLIEiJ_G0022607Sf19996.617ENSAMXG00000003630sf15079.462Astyanax_mexicanus
MGP_CAROLIEiJ_G0022607Sf110099.625ENSBTAG00000001035SF110099.374Bos_taurus
MGP_CAROLIEiJ_G0022607Sf110099.625ENSCJAG00000002780SF110099.374Callithrix_jacchus
MGP_CAROLIEiJ_G0022607Sf110099.625ENSCAFG00000014239SF110099.216Canis_familiaris
MGP_CAROLIEiJ_G0022607Sf110099.625ENSCAFG00020014381SF110099.374Canis_lupus_dingo
MGP_CAROLIEiJ_G0022607Sf110099.625ENSCHIG00000025867SF110099.453Capra_hircus
MGP_CAROLIEiJ_G0022607Sf19999.240ENSTSYG00000033618SF188100.000Carlito_syrichta
MGP_CAROLIEiJ_G0022607Sf110099.625ENSCAPG00000010762SF110097.500Cavia_aperea
MGP_CAROLIEiJ_G0022607Sf110099.625ENSCPOG00000012290SF110099.069Cavia_porcellus
MGP_CAROLIEiJ_G0022607Sf110088.390ENSCCAG00000023781-9087.229Cebus_capucinus
MGP_CAROLIEiJ_G0022607Sf110099.625ENSCCAG00000037881SF110099.216Cebus_capucinus
MGP_CAROLIEiJ_G0022607Sf110099.625ENSCATG00000011564SF110099.374Cercocebus_atys
MGP_CAROLIEiJ_G0022607Sf110099.625ENSCSAG00000007258SF110099.453Chlorocebus_sabaeus
MGP_CAROLIEiJ_G0022607Sf19989.773ENSCHOG00000006008SF17993.062Choloepus_hoffmanni
MGP_CAROLIEiJ_G0022607Sf110099.251ENSCPBG00000023763SF16685.106Chrysemys_picta_bellii
MGP_CAROLIEiJ_G0022607Sf19971.591ENSCING00000005564-7261.667Ciona_intestinalis
MGP_CAROLIEiJ_G0022607Sf19972.727ENSCSAVG00000009055-8756.438Ciona_savignyi
MGP_CAROLIEiJ_G0022607Sf110099.625ENSCANG00000042201SF110099.374Colobus_angolensis_palliatus
MGP_CAROLIEiJ_G0022607Sf1100100.000ENSCGRG00001003677Sf110099.844Cricetulus_griseus_chok1gshd
MGP_CAROLIEiJ_G0022607Sf1100100.000ENSCGRG00000001708Sf110099.464Cricetulus_griseus_crigri
MGP_CAROLIEiJ_G0022607Sf19993.609ENSCSEG00000014375sf15776.077Cynoglossus_semilaevis
MGP_CAROLIEiJ_G0022607Sf19995.113ENSCVAG00000001670sf16378.729Cyprinodon_variegatus
MGP_CAROLIEiJ_G0022607Sf19995.489ENSDARG00000008188sf17279.021Danio_rerio
MGP_CAROLIEiJ_G0022607Sf110099.625ENSDNOG00000001282SF110098.905Dasypus_novemcinctus
MGP_CAROLIEiJ_G0022607Sf110099.625ENSDORG00000016334Sf110099.374Dipodomys_ordii
MGP_CAROLIEiJ_G0022607Sf110098.502ENSETEG00000012830SF18290.769Echinops_telfairi
MGP_CAROLIEiJ_G0022607Sf110099.251ENSEASG00005018272SF110099.088Equus_asinus_asinus
MGP_CAROLIEiJ_G0022607Sf110099.625ENSECAG00000024544SF110099.270Equus_caballus
MGP_CAROLIEiJ_G0022607Sf19099.582ENSEEUG00000001058SF110098.473Erinaceus_europaeus
MGP_CAROLIEiJ_G0022607Sf19993.985ENSELUG00000013225sf15479.426Esox_lucius
MGP_CAROLIEiJ_G0022607Sf110099.625ENSFCAG00000012231SF110099.216Felis_catus
MGP_CAROLIEiJ_G0022607Sf15099.254ENSFALG00000002749-10098.540Ficedula_albicollis
MGP_CAROLIEiJ_G0022607Sf110099.625ENSFDAG00000009833SF110097.679Fukomys_damarensis
MGP_CAROLIEiJ_G0022607Sf19994.737ENSFHEG00000022656sf16176.334Fundulus_heteroclitus
MGP_CAROLIEiJ_G0022607Sf19992.481ENSGMOG00000007469sf17474.541Gadus_morhua
MGP_CAROLIEiJ_G0022607Sf19995.489ENSGAFG00000019284sf17880.476Gambusia_affinis
MGP_CAROLIEiJ_G0022607Sf19994.361ENSGACG00000000826sf16877.014Gasterosteus_aculeatus
MGP_CAROLIEiJ_G0022607Sf110099.251ENSGAGG00000021691SF17285.714Gopherus_agassizii
MGP_CAROLIEiJ_G0022607Sf19995.489ENSHBUG00000011598sf16175.973Haplochromis_burtoni
MGP_CAROLIEiJ_G0022607Sf110099.625ENSHGLG00000009541SF110099.060Heterocephalus_glaber_female
MGP_CAROLIEiJ_G0022607Sf110099.625ENSHGLG00100013879-10097.679Heterocephalus_glaber_male
MGP_CAROLIEiJ_G0022607Sf19792.248ENSHGLG00100008076-8786.806Heterocephalus_glaber_male
MGP_CAROLIEiJ_G0022607Sf19691.406ENSHGLG00100008255-9485.924Heterocephalus_glaber_male
MGP_CAROLIEiJ_G0022607Sf19994.361ENSHCOG00000011388sf15876.998Hippocampus_comes
MGP_CAROLIEiJ_G0022607Sf110085.393ENSSTOG00000024353-9882.740Ictidomys_tridecemlineatus
MGP_CAROLIEiJ_G0022607Sf110099.625ENSSTOG00000009790-10099.363Ictidomys_tridecemlineatus
MGP_CAROLIEiJ_G0022607Sf110099.625ENSJJAG00000011788Sf110099.531Jaculus_jaculus
MGP_CAROLIEiJ_G0022607Sf19994.737ENSKMAG00000005854sf16377.518Kryptolebias_marmoratus
MGP_CAROLIEiJ_G0022607Sf19994.737ENSLBEG00000019836sf16478.469Labrus_bergylta
MGP_CAROLIEiJ_G0022607Sf110089.139ENSLACG00000018493SF18769.742Latimeria_chalumnae
MGP_CAROLIEiJ_G0022607Sf19996.241ENSLOCG00000002130sf15980.296Lepisosteus_oculatus
MGP_CAROLIEiJ_G0022607Sf110099.251ENSLAFG00000007201SF110094.884Loxodonta_africana
MGP_CAROLIEiJ_G0022607Sf110099.625ENSMFAG00000033122SF110099.374Macaca_fascicularis
MGP_CAROLIEiJ_G0022607Sf110099.625ENSMMUG00000022606SF110099.453Macaca_mulatta
MGP_CAROLIEiJ_G0022607Sf110099.625ENSMNEG00000037901SF110099.374Macaca_nemestrina
MGP_CAROLIEiJ_G0022607Sf110099.625ENSMLEG00000040706SF19599.364Mandrillus_leucophaeus
MGP_CAROLIEiJ_G0022607Sf19995.113ENSMAMG00000001780sf15878.208Mastacembelus_armatus
MGP_CAROLIEiJ_G0022607Sf19995.489ENSMZEG00005009196sf16175.744Maylandia_zebra
MGP_CAROLIEiJ_G0022607Sf1100100.000ENSMAUG00000014064Sf110099.687Mesocricetus_auratus
MGP_CAROLIEiJ_G0022607Sf110099.625ENSMICG00000001202SF110099.218Microcebus_murinus
MGP_CAROLIEiJ_G0022607Sf1100100.000ENSMOCG00000022038Sf110099.687Microtus_ochrogaster
MGP_CAROLIEiJ_G0022607Sf19992.481ENSMMOG00000020474sf16077.053Mola_mola
MGP_CAROLIEiJ_G0022607Sf110099.625ENSMODG00000029407SF19794.183Monodelphis_domestica
MGP_CAROLIEiJ_G0022607Sf19993.233ENSMALG00000020521sf16876.596Monopterus_albus
MGP_CAROLIEiJ_G0022607Sf1100100.000ENSMUSG00000024949Sf1100100.000Mus_musculus
MGP_CAROLIEiJ_G0022607Sf1100100.000MGP_PahariEiJ_G0014101Sf1100100.000Mus_pahari
MGP_CAROLIEiJ_G0022607Sf1100100.000MGP_SPRETEiJ_G0023518Sf1100100.000Mus_spretus
MGP_CAROLIEiJ_G0022607Sf110099.625ENSMPUG00000012684SF110098.122Mustela_putorius_furo
MGP_CAROLIEiJ_G0022607Sf110095.131ENSMLUG00000029800-7894.273Myotis_lucifugus
MGP_CAROLIEiJ_G0022607Sf110099.625ENSMLUG00000015217-9999.049Myotis_lucifugus
MGP_CAROLIEiJ_G0022607Sf110099.625ENSNGAG00000005550Sf110099.216Nannospalax_galili
MGP_CAROLIEiJ_G0022607Sf19995.489ENSNBRG00000017606sf16079.805Neolamprologus_brichardi
MGP_CAROLIEiJ_G0022607Sf110099.625ENSNLEG00000005236-10099.218Nomascus_leucogenys
MGP_CAROLIEiJ_G0022607Sf110099.625ENSMEUG00000013424SF110098.305Notamacropus_eugenii
MGP_CAROLIEiJ_G0022607Sf19099.582ENSOPRG00000005008SF110098.788Ochotona_princeps
MGP_CAROLIEiJ_G0022607Sf110095.506ENSODEG00000006102-10087.057Octodon_degus
MGP_CAROLIEiJ_G0022607Sf19995.489ENSONIG00000015728sf16175.515Oreochromis_niloticus
MGP_CAROLIEiJ_G0022607Sf18199.535ENSOANG00000002909SF19687.212Ornithorhynchus_anatinus
MGP_CAROLIEiJ_G0022607Sf110099.625ENSOCUG00000026486SF110099.048Oryctolagus_cuniculus
MGP_CAROLIEiJ_G0022607Sf19994.737ENSORLG00000011853sf15877.458Oryzias_latipes
MGP_CAROLIEiJ_G0022607Sf19994.737ENSORLG00020011834sf16076.291Oryzias_latipes_hni
MGP_CAROLIEiJ_G0022607Sf19994.737ENSORLG00015012855sf15976.978Oryzias_latipes_hsok
MGP_CAROLIEiJ_G0022607Sf19994.737ENSOMEG00000005210sf16175.587Oryzias_melastigma
MGP_CAROLIEiJ_G0022607Sf110099.625ENSOGAG00000016196SF110099.060Otolemur_garnettii
MGP_CAROLIEiJ_G0022607Sf110099.625ENSOARG00000009166SF19794.756Ovis_aries
MGP_CAROLIEiJ_G0022607Sf110099.625ENSPPAG00000002799-10099.347Pan_paniscus
MGP_CAROLIEiJ_G0022607Sf110099.625ENSPPRG00000013566SF110099.347Panthera_pardus
MGP_CAROLIEiJ_G0022607Sf110099.625ENSPTIG00000016141SF19988.482Panthera_tigris_altaica
MGP_CAROLIEiJ_G0022607Sf110099.625ENSPTRG00000003846SF110099.216Pan_troglodytes
MGP_CAROLIEiJ_G0022607Sf110099.625ENSPANG00000020754SF110099.453Papio_anubis
MGP_CAROLIEiJ_G0022607Sf18092.958ENSPKIG00000012116sf18874.499Paramormyrops_kingsleyae
MGP_CAROLIEiJ_G0022607Sf16799.438ENSPSIG00000003610SF19776.078Pelodiscus_sinensis
MGP_CAROLIEiJ_G0022607Sf1100100.000ENSPEMG00000010463Sf110099.843Peromyscus_maniculatus_bairdii
MGP_CAROLIEiJ_G0022607Sf110077.612ENSPMAG00000008272sf15367.209Petromyzon_marinus
MGP_CAROLIEiJ_G0022607Sf110099.625ENSPCIG00000018173SF110098.592Phascolarctos_cinereus
MGP_CAROLIEiJ_G0022607Sf19995.489ENSPFOG00000013683sf16881.384Poecilia_formosa
MGP_CAROLIEiJ_G0022607Sf19995.489ENSPLAG00000018076sf16179.426Poecilia_latipinna
MGP_CAROLIEiJ_G0022607Sf19995.489ENSPMEG00000005726sf16279.665Poecilia_mexicana
MGP_CAROLIEiJ_G0022607Sf19995.489ENSPREG00000004155sf15978.947Poecilia_reticulata
MGP_CAROLIEiJ_G0022607Sf110099.625ENSPPYG00000003098-10099.060Pongo_abelii
MGP_CAROLIEiJ_G0022607Sf110099.251ENSPCAG00000013631SF18098.699Procavia_capensis
MGP_CAROLIEiJ_G0022607Sf110099.625ENSPCOG00000027546SF110099.218Propithecus_coquereli
MGP_CAROLIEiJ_G0022607Sf110099.625ENSPVAG00000016938SF18198.885Pteropus_vampyrus
MGP_CAROLIEiJ_G0022607Sf19995.489ENSPNYG00000004673sf15978.436Pundamilia_nyererei
MGP_CAROLIEiJ_G0022607Sf19995.865ENSPNAG00000013072sf15979.805Pygocentrus_nattereri
MGP_CAROLIEiJ_G0022607Sf1100100.000ENSRNOG00000021085Sf1100100.000Rattus_norvegicus
MGP_CAROLIEiJ_G0022607Sf110099.625ENSRBIG00000042818SF110095.305Rhinopithecus_bieti
MGP_CAROLIEiJ_G0022607Sf110099.625ENSRROG00000045655SF110099.425Rhinopithecus_roxellana
MGP_CAROLIEiJ_G0022607Sf19745.788YLR116WMSL56143.182Saccharomyces_cerevisiae
MGP_CAROLIEiJ_G0022607Sf19588.933ENSSBOG00000022267-9981.010Saimiri_boliviensis_boliviensis
MGP_CAROLIEiJ_G0022607Sf110099.625ENSSHAG00000006841SF17592.927Sarcophilus_harrisii
MGP_CAROLIEiJ_G0022607Sf19993.985ENSSFOG00015021978sf15577.295Scleropages_formosus
MGP_CAROLIEiJ_G0022607Sf19993.985ENSSMAG00000007549sf16376.761Scophthalmus_maximus
MGP_CAROLIEiJ_G0022607Sf19995.113ENSSDUG00000003903sf16376.636Seriola_dumerili
MGP_CAROLIEiJ_G0022607Sf19995.113ENSSLDG00000013075sf16176.636Seriola_lalandi_dorsalis
MGP_CAROLIEiJ_G0022607Sf110092.884ENSSARG00000008180SF110095.164Sorex_araneus
MGP_CAROLIEiJ_G0022607Sf110098.502ENSSPUG00000012907SF18681.190Sphenodon_punctatus
MGP_CAROLIEiJ_G0022607Sf19995.113ENSSPAG00000019060sf16174.828Stegastes_partitus
MGP_CAROLIEiJ_G0022607Sf110099.625ENSSSCG00000013021SF110099.270Sus_scrofa
MGP_CAROLIEiJ_G0022607Sf15099.254ENSTGUG00000016087-10098.540Taeniopygia_guttata
MGP_CAROLIEiJ_G0022607Sf19979.851ENSTNIG00000004820sf18070.023Tetraodon_nigroviridis
MGP_CAROLIEiJ_G0022607Sf110099.625ENSTBEG00000013133SF17998.876Tupaia_belangeri
MGP_CAROLIEiJ_G0022607Sf19895.717ENSTTRG00000008857SF110095.717Tursiops_truncatus
MGP_CAROLIEiJ_G0022607Sf18296.756ENSUAMG00000011977SF110096.756Ursus_americanus
MGP_CAROLIEiJ_G0022607Sf110099.625ENSUMAG00000007268SF189100.000Ursus_maritimus
MGP_CAROLIEiJ_G0022607Sf18799.571ENSVPAG00000011912SF16699.598Vicugna_pacos
MGP_CAROLIEiJ_G0022607Sf110099.625ENSVVUG00000028585SF110099.453Vulpes_vulpes
MGP_CAROLIEiJ_G0022607Sf19998.120ENSXETG00000008434sf16881.311Xenopus_tropicalis
MGP_CAROLIEiJ_G0022607Sf19995.489ENSXCOG00000003704sf17581.188Xiphophorus_couchianus
MGP_CAROLIEiJ_G0022607Sf19995.489ENSXMAG00000007822sf16179.665Xiphophorus_maculatus

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