EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_CAROLIEiJ_G0022627 (Gene tree)
Gene ID: 110286024
Gene Symbol: Trpt1
Alias: EST-MNCb3719|TPT1|Tpt1h
Full Name: tRNA phosphotransferase 1
Gene Type: protein_coding
Species: Mus_caroli
Status: putative
Strand: Plus strand
Length: 2849 bases
Position: chr19:3665776-3668624
Accession: 110286024
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CAROLIEiJ_P0047926	PTS_2-RNA	PF01885.16	2.1e-63	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CAROLIEiJ_T0047926	-	1103	XM_021152481	MGP_CAROLIEiJ_P0047926	249 (aa)	XP_021008140	UPI0000194985

Gene Model

Click here to download MGP_CAROLIEiJ_G0022627's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CAROLIEiJ_G0022627's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_CAROLIEiJ_G0022627	Trpt1	100	81.890	ENSG00000149743	TRPT1	100	83.415	Homo_sapiens
MGP_CAROLIEiJ_G0022627	Trpt1	82	57.767	ENSAPOG00000012925	trpt1	96	56.561	Acanthochromis_polyacanthus
MGP_CAROLIEiJ_G0022627	Trpt1	100	84.252	ENSAMEG00000018040	TRPT1	100	84.252	Ailuropoda_melanoleuca
MGP_CAROLIEiJ_G0022627	Trpt1	81	56.158	ENSACIG00000022413	trpt1	95	55.204	Amphilophus_citrinellus
MGP_CAROLIEiJ_G0022627	Trpt1	82	58.252	ENSAOCG00000001163	trpt1	83	57.466	Amphiprion_ocellaris
MGP_CAROLIEiJ_G0022627	Trpt1	82	58.252	ENSAPEG00000009873	trpt1	96	57.466	Amphiprion_percula
MGP_CAROLIEiJ_G0022627	Trpt1	83	58.937	ENSATEG00000014371	trpt1	96	57.466	Anabas_testudineus
MGP_CAROLIEiJ_G0022627	Trpt1	82	66.341	ENSACAG00000000696	TRPT1	96	64.516	Anolis_carolinensis
MGP_CAROLIEiJ_G0022627	Trpt1	100	82.677	ENSANAG00000019580	TRPT1	100	82.677	Aotus_nancymaae
MGP_CAROLIEiJ_G0022627	Trpt1	82	56.311	ENSACLG00000016893	trpt1	95	56.364	Astatotilapia_calliptera
MGP_CAROLIEiJ_G0022627	Trpt1	81	58.128	ENSAMXG00000010533	trpt1	97	56.109	Astyanax_mexicanus
MGP_CAROLIEiJ_G0022627	Trpt1	97	81.452	ENSBTAG00000016555	TRPT1	97	83.333	Bos_taurus
MGP_CAROLIEiJ_G0022627	Trpt1	100	81.250	ENSCJAG00000018169	TRPT1	100	81.250	Callithrix_jacchus
MGP_CAROLIEiJ_G0022627	Trpt1	100	80.000	ENSCAFG00000014591	TRPT1	100	81.712	Canis_familiaris
MGP_CAROLIEiJ_G0022627	Trpt1	95	80.242	ENSCAFG00020014101	TRPT1	99	82.041	Canis_lupus_dingo
MGP_CAROLIEiJ_G0022627	Trpt1	97	83.539	ENSCHIG00000021308	TRPT1	98	83.539	Capra_hircus
MGP_CAROLIEiJ_G0022627	Trpt1	81	79.602	ENSTSYG00000026766	TRPT1	100	79.602	Carlito_syrichta
MGP_CAROLIEiJ_G0022627	Trpt1	91	84.141	ENSCAPG00000016934	TRPT1	95	84.141	Cavia_aperea
MGP_CAROLIEiJ_G0022627	Trpt1	100	80.315	ENSCPOG00000002923	TRPT1	100	80.315	Cavia_porcellus
MGP_CAROLIEiJ_G0022627	Trpt1	81	84.080	ENSCCAG00000025683	TRPT1	100	84.080	Cebus_capucinus
MGP_CAROLIEiJ_G0022627	Trpt1	100	81.641	ENSCATG00000031563	TRPT1	100	81.641	Cercocebus_atys
MGP_CAROLIEiJ_G0022627	Trpt1	100	80.709	ENSCLAG00000016380	TRPT1	100	80.709	Chinchilla_lanigera
MGP_CAROLIEiJ_G0022627	Trpt1	100	80.784	ENSCSAG00000006952	TRPT1	100	80.784	Chlorocebus_sabaeus
MGP_CAROLIEiJ_G0022627	Trpt1	56	46.809	ENSCING00000002405	-	76	46.809	Ciona_intestinalis
MGP_CAROLIEiJ_G0022627	Trpt1	78	38.384	ENSCING00000024241	-	84	37.981	Ciona_intestinalis
MGP_CAROLIEiJ_G0022627	Trpt1	83	40.000	ENSCSAVG00000011071	-	65	40.000	Ciona_savignyi
MGP_CAROLIEiJ_G0022627	Trpt1	86	39.462	ENSCSAVG00000003949	-	99	39.462	Ciona_savignyi
MGP_CAROLIEiJ_G0022627	Trpt1	100	81.641	ENSCANG00000042980	TRPT1	100	81.641	Colobus_angolensis_palliatus
MGP_CAROLIEiJ_G0022627	Trpt1	100	90.361	ENSCGRG00001008474	Trpt1	100	90.361	Cricetulus_griseus_chok1gshd
MGP_CAROLIEiJ_G0022627	Trpt1	100	90.361	ENSCGRG00000009793	Trpt1	100	90.361	Cricetulus_griseus_crigri
MGP_CAROLIEiJ_G0022627	Trpt1	83	59.330	ENSCSEG00000005840	trpt1	96	57.778	Cynoglossus_semilaevis
MGP_CAROLIEiJ_G0022627	Trpt1	87	57.798	ENSCVAG00000006318	trpt1	99	57.798	Cyprinodon_variegatus
MGP_CAROLIEiJ_G0022627	Trpt1	80	56.000	ENSDARG00000037628	trpt1	93	54.930	Danio_rerio
MGP_CAROLIEiJ_G0022627	Trpt1	100	64.706	ENSDNOG00000044923	TRPT1	93	64.706	Dasypus_novemcinctus
MGP_CAROLIEiJ_G0022627	Trpt1	95	83.966	ENSDORG00000001624	Trpt1	97	83.966	Dipodomys_ordii
MGP_CAROLIEiJ_G0022627	Trpt1	82	40.670	FBgn0053057	CG33057	96	40.670	Drosophila_melanogaster
MGP_CAROLIEiJ_G0022627	Trpt1	84	54.976	ENSEBUG00000012569	-	90	54.118	Eptatretus_burgeri
MGP_CAROLIEiJ_G0022627	Trpt1	100	84.646	ENSEASG00005019983	TRPT1	100	84.646	Equus_asinus_asinus
MGP_CAROLIEiJ_G0022627	Trpt1	100	82.677	ENSECAG00000009917	TRPT1	100	86.283	Equus_caballus
MGP_CAROLIEiJ_G0022627	Trpt1	99	79.447	ENSEEUG00000012739	TRPT1	100	79.447	Erinaceus_europaeus
MGP_CAROLIEiJ_G0022627	Trpt1	82	57.767	ENSELUG00000007385	trpt1	96	57.273	Esox_lucius
MGP_CAROLIEiJ_G0022627	Trpt1	100	83.858	ENSFCAG00000024621	TRPT1	100	84.314	Felis_catus
MGP_CAROLIEiJ_G0022627	Trpt1	100	79.921	ENSFDAG00000002738	TRPT1	100	79.921	Fukomys_damarensis
MGP_CAROLIEiJ_G0022627	Trpt1	83	59.135	ENSFHEG00000002434	trpt1	98	57.658	Fundulus_heteroclitus
MGP_CAROLIEiJ_G0022627	Trpt1	80	55.500	ENSGMOG00000008716	trpt1	97	55.500	Gadus_morhua
MGP_CAROLIEiJ_G0022627	Trpt1	84	60.000	ENSGALG00000050256	TRPT1	71	60.000	Gallus_gallus
MGP_CAROLIEiJ_G0022627	Trpt1	80	58.500	ENSGAFG00000016762	trpt1	94	56.744	Gambusia_affinis
MGP_CAROLIEiJ_G0022627	Trpt1	81	55.446	ENSGACG00000016927	trpt1	99	53.125	Gasterosteus_aculeatus
MGP_CAROLIEiJ_G0022627	Trpt1	100	82.677	ENSGGOG00000012163	TRPT1	100	82.677	Gorilla_gorilla
MGP_CAROLIEiJ_G0022627	Trpt1	82	56.796	ENSHBUG00000012772	trpt1	95	56.818	Haplochromis_burtoni
MGP_CAROLIEiJ_G0022627	Trpt1	100	80.709	ENSHGLG00000013748	TRPT1	100	80.709	Heterocephalus_glaber_female
MGP_CAROLIEiJ_G0022627	Trpt1	100	80.709	ENSHGLG00100013048	TRPT1	100	80.709	Heterocephalus_glaber_male
MGP_CAROLIEiJ_G0022627	Trpt1	83	55.072	ENSHCOG00000000218	trpt1	97	53.333	Hippocampus_comes
MGP_CAROLIEiJ_G0022627	Trpt1	83	52.632	ENSIPUG00000002573	trpt1	96	51.584	Ictalurus_punctatus
MGP_CAROLIEiJ_G0022627	Trpt1	100	85.039	ENSSTOG00000014285	TRPT1	100	85.039	Ictidomys_tridecemlineatus
MGP_CAROLIEiJ_G0022627	Trpt1	100	85.944	ENSJJAG00000010855	Trpt1	100	85.944	Jaculus_jaculus
MGP_CAROLIEiJ_G0022627	Trpt1	83	57.488	ENSKMAG00000004214	trpt1	99	56.195	Kryptolebias_marmoratus
MGP_CAROLIEiJ_G0022627	Trpt1	82	57.561	ENSLBEG00000005640	trpt1	95	56.422	Labrus_bergylta
MGP_CAROLIEiJ_G0022627	Trpt1	80	57.286	ENSLACG00000016922	TRPT1	88	56.279	Latimeria_chalumnae
MGP_CAROLIEiJ_G0022627	Trpt1	83	58.454	ENSLOCG00000001345	trpt1	90	57.014	Lepisosteus_oculatus
MGP_CAROLIEiJ_G0022627	Trpt1	100	77.953	ENSLAFG00000009075	TRPT1	99	77.953	Loxodonta_africana
MGP_CAROLIEiJ_G0022627	Trpt1	100	81.641	ENSMFAG00000036828	TRPT1	100	81.641	Macaca_fascicularis
MGP_CAROLIEiJ_G0022627	Trpt1	100	81.890	ENSMMUG00000012940	TRPT1	100	81.890	Macaca_mulatta
MGP_CAROLIEiJ_G0022627	Trpt1	100	81.641	ENSMNEG00000033348	TRPT1	100	81.641	Macaca_nemestrina
MGP_CAROLIEiJ_G0022627	Trpt1	100	81.250	ENSMLEG00000031438	TRPT1	100	81.250	Mandrillus_leucophaeus
MGP_CAROLIEiJ_G0022627	Trpt1	82	57.282	ENSMAMG00000021617	trpt1	96	57.014	Mastacembelus_armatus
MGP_CAROLIEiJ_G0022627	Trpt1	82	56.796	ENSMZEG00005004773	trpt1	95	56.818	Maylandia_zebra
MGP_CAROLIEiJ_G0022627	Trpt1	78	89.286	ENSMAUG00000014107	Trpt1	95	89.286	Mesocricetus_auratus
MGP_CAROLIEiJ_G0022627	Trpt1	100	83.858	ENSMICG00000016950	TRPT1	100	83.858	Microcebus_murinus
MGP_CAROLIEiJ_G0022627	Trpt1	100	90.763	ENSMOCG00000021342	Trpt1	100	90.763	Microtus_ochrogaster
MGP_CAROLIEiJ_G0022627	Trpt1	81	56.436	ENSMMOG00000002896	trpt1	93	56.221	Mola_mola
MGP_CAROLIEiJ_G0022627	Trpt1	86	70.000	ENSMODG00000010226	TRPT1	100	70.000	Monodelphis_domestica
MGP_CAROLIEiJ_G0022627	Trpt1	82	56.796	ENSMALG00000012208	trpt1	89	56.109	Monopterus_albus
MGP_CAROLIEiJ_G0022627	Trpt1	100	100.000	ENSMUSG00000047656	Trpt1	100	100.000	Mus_musculus
MGP_CAROLIEiJ_G0022627	Trpt1	100	96.386	MGP_PahariEiJ_G0014121	Trpt1	100	96.386	Mus_pahari
MGP_CAROLIEiJ_G0022627	Trpt1	100	98.795	MGP_SPRETEiJ_G0023537	Trpt1	100	98.795	Mus_spretus
MGP_CAROLIEiJ_G0022627	Trpt1	99	82.609	ENSMPUG00000013272	TRPT1	92	82.609	Mustela_putorius_furo
MGP_CAROLIEiJ_G0022627	Trpt1	93	84.848	ENSMLUG00000024858	TRPT1	94	84.519	Myotis_lucifugus
MGP_CAROLIEiJ_G0022627	Trpt1	82	85.854	ENSNGAG00000007665	Trpt1	100	85.854	Nannospalax_galili
MGP_CAROLIEiJ_G0022627	Trpt1	82	53.153	ENSNBRG00000001528	trpt1	96	53.191	Neolamprologus_brichardi
MGP_CAROLIEiJ_G0022627	Trpt1	100	68.093	ENSNLEG00000033525	-	100	68.293	Nomascus_leucogenys
MGP_CAROLIEiJ_G0022627	Trpt1	90	69.955	ENSMEUG00000000943	TRPT1	91	70.130	Notamacropus_eugenii
MGP_CAROLIEiJ_G0022627	Trpt1	100	76.772	ENSOPRG00000015917	TRPT1	100	76.772	Ochotona_princeps
MGP_CAROLIEiJ_G0022627	Trpt1	95	77.686	ENSODEG00000015724	TRPT1	98	77.686	Octodon_degus
MGP_CAROLIEiJ_G0022627	Trpt1	82	55.825	ENSONIG00000005333	trpt1	95	55.909	Oreochromis_niloticus
MGP_CAROLIEiJ_G0022627	Trpt1	81	63.725	ENSOANG00000010375	TRPT1	95	63.721	Ornithorhynchus_anatinus
MGP_CAROLIEiJ_G0022627	Trpt1	100	79.921	ENSOCUG00000022244	TRPT1	100	79.921	Oryctolagus_cuniculus
MGP_CAROLIEiJ_G0022627	Trpt1	89	58.296	ENSORLG00000025159	trpt1	99	58.296	Oryzias_latipes
MGP_CAROLIEiJ_G0022627	Trpt1	89	59.641	ENSORLG00020018944	trpt1	98	59.641	Oryzias_latipes_hni
MGP_CAROLIEiJ_G0022627	Trpt1	76	57.068	ENSORLG00015017108	trpt1	85	57.068	Oryzias_latipes_hsok
MGP_CAROLIEiJ_G0022627	Trpt1	85	61.502	ENSOMEG00000018645	trpt1	95	61.502	Oryzias_melastigma
MGP_CAROLIEiJ_G0022627	Trpt1	100	81.890	ENSOGAG00000007134	TRPT1	99	81.890	Otolemur_garnettii
MGP_CAROLIEiJ_G0022627	Trpt1	97	82.258	ENSOARG00000004961	TRPT1	98	82.258	Ovis_aries
MGP_CAROLIEiJ_G0022627	Trpt1	100	68.504	ENSPPAG00000027600	TRPT1	100	83.902	Pan_paniscus
MGP_CAROLIEiJ_G0022627	Trpt1	98	71.486	ENSPPRG00000022870	TRPT1	100	85.294	Panthera_pardus
MGP_CAROLIEiJ_G0022627	Trpt1	80	85.000	ENSPTIG00000018872	TRPT1	98	85.000	Panthera_tigris_altaica
MGP_CAROLIEiJ_G0022627	Trpt1	100	68.504	ENSPTRG00000003822	TRPT1	100	83.902	Pan_troglodytes
MGP_CAROLIEiJ_G0022627	Trpt1	100	81.250	ENSPANG00000011001	TRPT1	100	81.250	Papio_anubis
MGP_CAROLIEiJ_G0022627	Trpt1	83	55.288	ENSPKIG00000008323	trpt1	97	54.667	Paramormyrops_kingsleyae
MGP_CAROLIEiJ_G0022627	Trpt1	88	60.909	ENSPSIG00000009910	TRPT1	92	60.909	Pelodiscus_sinensis
MGP_CAROLIEiJ_G0022627	Trpt1	83	55.769	ENSPMGG00000005037	trpt1	92	55.769	Periophthalmus_magnuspinnatus
MGP_CAROLIEiJ_G0022627	Trpt1	100	87.952	ENSPEMG00000013720	Trpt1	100	87.952	Peromyscus_maniculatus_bairdii
MGP_CAROLIEiJ_G0022627	Trpt1	82	57.971	ENSPMAG00000001449	trpt1	99	57.971	Petromyzon_marinus
MGP_CAROLIEiJ_G0022627	Trpt1	88	69.545	ENSPCIG00000008060	TRPT1	98	67.078	Phascolarctos_cinereus
MGP_CAROLIEiJ_G0022627	Trpt1	83	57.005	ENSPFOG00000009475	trpt1	98	55.405	Poecilia_formosa
MGP_CAROLIEiJ_G0022627	Trpt1	83	56.522	ENSPMEG00000003682	trpt1	98	54.955	Poecilia_mexicana
MGP_CAROLIEiJ_G0022627	Trpt1	83	57.488	ENSPREG00000015408	trpt1	98	56.306	Poecilia_reticulata
MGP_CAROLIEiJ_G0022627	Trpt1	100	81.496	ENSPPYG00000003116	TRPT1	100	83.465	Pongo_abelii
MGP_CAROLIEiJ_G0022627	Trpt1	100	78.656	ENSPCAG00000000762	TRPT1	100	78.656	Procavia_capensis
MGP_CAROLIEiJ_G0022627	Trpt1	100	82.677	ENSPCOG00000010370	TRPT1	100	82.677	Propithecus_coquereli
MGP_CAROLIEiJ_G0022627	Trpt1	58	82.474	ENSPVAG00000017109	-	58	82.474	Pteropus_vampyrus
MGP_CAROLIEiJ_G0022627	Trpt1	82	52.703	ENSPNYG00000014805	trpt1	96	52.766	Pundamilia_nyererei
MGP_CAROLIEiJ_G0022627	Trpt1	82	55.556	ENSPNAG00000008548	trpt1	97	54.955	Pygocentrus_nattereri
MGP_CAROLIEiJ_G0022627	Trpt1	99	94.355	ENSRNOG00000023023	Trpt1	100	94.355	Rattus_norvegicus
MGP_CAROLIEiJ_G0022627	Trpt1	100	81.890	ENSRBIG00000040432	TRPT1	100	81.890	Rhinopithecus_bieti
MGP_CAROLIEiJ_G0022627	Trpt1	100	82.283	ENSRROG00000044905	TRPT1	100	82.283	Rhinopithecus_roxellana
MGP_CAROLIEiJ_G0022627	Trpt1	71	38.298	YOL102C	TPT1	80	38.298	Saccharomyces_cerevisiae
MGP_CAROLIEiJ_G0022627	Trpt1	100	81.890	ENSSBOG00000021466	TRPT1	100	81.890	Saimiri_boliviensis_boliviensis
MGP_CAROLIEiJ_G0022627	Trpt1	83	55.502	ENSSFOG00015005844	trpt1	96	54.505	Scleropages_formosus
MGP_CAROLIEiJ_G0022627	Trpt1	82	57.282	ENSSMAG00000017744	trpt1	99	55.752	Scophthalmus_maximus
MGP_CAROLIEiJ_G0022627	Trpt1	82	58.738	ENSSDUG00000017106	trpt1	97	58.371	Seriola_dumerili
MGP_CAROLIEiJ_G0022627	Trpt1	81	57.921	ENSSLDG00000015957	trpt1	88	56.796	Seriola_lalandi_dorsalis
MGP_CAROLIEiJ_G0022627	Trpt1	53	85.185	ENSSARG00000011737	-	58	85.185	Sorex_araneus
MGP_CAROLIEiJ_G0022627	Trpt1	77	54.688	ENSSPAG00000007557	trpt1	76	54.688	Stegastes_partitus
MGP_CAROLIEiJ_G0022627	Trpt1	98	85.246	ENSSSCG00000013040	TRPT1	93	85.246	Sus_scrofa
MGP_CAROLIEiJ_G0022627	Trpt1	82	55.825	ENSTRUG00000023723	trpt1	95	55.204	Takifugu_rubripes
MGP_CAROLIEiJ_G0022627	Trpt1	83	57.005	ENSTNIG00000003381	trpt1	94	56.109	Tetraodon_nigroviridis
MGP_CAROLIEiJ_G0022627	Trpt1	100	78.715	ENSTBEG00000006023	TRPT1	97	78.715	Tupaia_belangeri
MGP_CAROLIEiJ_G0022627	Trpt1	100	81.496	ENSTTRG00000010252	TRPT1	100	81.496	Tursiops_truncatus
MGP_CAROLIEiJ_G0022627	Trpt1	100	84.252	ENSUAMG00000015208	TRPT1	100	84.252	Ursus_americanus
MGP_CAROLIEiJ_G0022627	Trpt1	100	84.252	ENSUMAG00000001410	TRPT1	100	84.252	Ursus_maritimus
MGP_CAROLIEiJ_G0022627	Trpt1	95	83.471	ENSVVUG00000029774	TRPT1	99	83.471	Vulpes_vulpes
MGP_CAROLIEiJ_G0022627	Trpt1	88	59.459	ENSXETG00000007196	trpt1	96	59.459	Xenopus_tropicalis
MGP_CAROLIEiJ_G0022627	Trpt1	79	56.061	ENSXCOG00000001614	trpt1	93	54.717	Xiphophorus_couchianus
MGP_CAROLIEiJ_G0022627	Trpt1	82	56.796	ENSXMAG00000003142	trpt1	99	54.222	Xiphophorus_maculatus