EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_CAROLIEiJ_G0022704 (Gene tree)
Gene ID: 110285364
Gene Symbol: Prpf19
Alias: D19Wsu55e|PSO4|Prp19|Snev
Full Name: pre-mRNA processing factor 19
Gene Type: protein_coding
Species: Mus_caroli
Status: putative
Strand: Plus strand
Length: 14104 bases
Position: chr19:8129677-8143780
Accession: 110285364
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CAROLIEiJ_P0048165	Prp19	PF08606.11	9.8e-33	1	1
MGP_CAROLIEiJ_P0048169	Prp19	PF08606.11	8.3e-26	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CAROLIEiJ_T0048172	-	260	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0048170	-	1757	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0048171	-	772	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0048165	-	2134	XM_021151455	MGP_CAROLIEiJ_P0048165	504 (aa)	XP_021007114	UPI0000027B4F
MGP_CAROLIEiJ_T0048167	-	709	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0048166	-	598	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0048169	-	5975	-	MGP_CAROLIEiJ_P0048169	523 (aa)	XP_021007112	UPI00000EB4FA
MGP_CAROLIEiJ_T0048168	-	709	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_CAROLIEiJ_G0022704's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CAROLIEiJ_G0022704's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_CAROLIEiJ_G0022704	Prpf19	100	99.405	ENSG00000110107	PRPF19	100	100.000	Homo_sapiens
MGP_CAROLIEiJ_G0022704	Prpf19	100	85.941	ENSAPOG00000017823	prpf19	100	85.941	Acanthochromis_polyacanthus
MGP_CAROLIEiJ_G0022704	Prpf19	100	99.195	ENSAMEG00000007375	PRPF19	99	99.195	Ailuropoda_melanoleuca
MGP_CAROLIEiJ_G0022704	Prpf19	99	84.692	ENSACIG00000015876	prpf19	99	84.692	Amphilophus_citrinellus
MGP_CAROLIEiJ_G0022704	Prpf19	100	85.941	ENSAOCG00000020444	prpf19	100	85.941	Amphiprion_ocellaris
MGP_CAROLIEiJ_G0022704	Prpf19	100	85.941	ENSAPEG00000016076	prpf19	100	85.941	Amphiprion_percula
MGP_CAROLIEiJ_G0022704	Prpf19	100	85.941	ENSATEG00000008840	prpf19	100	85.941	Anabas_testudineus
MGP_CAROLIEiJ_G0022704	Prpf19	100	97.421	ENSACAG00000017797	PRPF19	100	97.421	Anolis_carolinensis
MGP_CAROLIEiJ_G0022704	Prpf19	100	99.008	ENSANAG00000021762	PRPF19	100	99.008	Aotus_nancymaae
MGP_CAROLIEiJ_G0022704	Prpf19	100	84.950	ENSACLG00000009416	prpf19	100	84.950	Astatotilapia_calliptera
MGP_CAROLIEiJ_G0022704	Prpf19	100	85.743	ENSAMXG00000011547	prpf19	100	85.743	Astyanax_mexicanus
MGP_CAROLIEiJ_G0022704	Prpf19	100	99.603	ENSBTAG00000014366	PRPF19	100	99.603	Bos_taurus
MGP_CAROLIEiJ_G0022704	Prpf19	100	51.581	WBGene00020423	prp-19	100	51.581	Caenorhabditis_elegans
MGP_CAROLIEiJ_G0022704	Prpf19	100	99.206	ENSCJAG00000016509	PRPF19	100	99.206	Callithrix_jacchus
MGP_CAROLIEiJ_G0022704	Prpf19	100	99.206	ENSCAFG00000016438	PRPF19	98	99.206	Canis_familiaris
MGP_CAROLIEiJ_G0022704	Prpf19	100	99.206	ENSCAFG00020012565	PRPF19	100	99.206	Canis_lupus_dingo
MGP_CAROLIEiJ_G0022704	Prpf19	100	99.603	ENSCHIG00000018281	PRPF19	100	99.603	Capra_hircus
MGP_CAROLIEiJ_G0022704	Prpf19	99	98.594	ENSTSYG00000006860	PRPF19	99	98.594	Carlito_syrichta
MGP_CAROLIEiJ_G0022704	Prpf19	99	99.198	ENSCAPG00000016225	PRPF19	100	99.198	Cavia_aperea
MGP_CAROLIEiJ_G0022704	Prpf19	100	99.603	ENSCPOG00000020688	PRPF19	100	99.603	Cavia_porcellus
MGP_CAROLIEiJ_G0022704	Prpf19	100	99.206	ENSCCAG00000025839	PRPF19	100	99.206	Cebus_capucinus
MGP_CAROLIEiJ_G0022704	Prpf19	100	99.405	ENSCATG00000041921	PRPF19	100	99.405	Cercocebus_atys
MGP_CAROLIEiJ_G0022704	Prpf19	99	99.598	ENSCLAG00000003338	PRPF19	100	99.598	Chinchilla_lanigera
MGP_CAROLIEiJ_G0022704	Prpf19	100	99.405	ENSCSAG00000006254	PRPF19	100	99.405	Chlorocebus_sabaeus
MGP_CAROLIEiJ_G0022704	Prpf19	62	87.460	ENSCHOG00000005840	PRPF19	100	87.460	Choloepus_hoffmanni
MGP_CAROLIEiJ_G0022704	Prpf19	100	97.421	ENSCPBG00000027061	PRPF19	100	97.421	Chrysemys_picta_bellii
MGP_CAROLIEiJ_G0022704	Prpf19	87	68.119	ENSCING00000016625	-	99	68.119	Ciona_intestinalis
MGP_CAROLIEiJ_G0022704	Prpf19	100	68.056	ENSCSAVG00000002027	-	99	68.056	Ciona_savignyi
MGP_CAROLIEiJ_G0022704	Prpf19	99	99.346	ENSCANG00000027155	PRPF19	99	45.857	Colobus_angolensis_palliatus
MGP_CAROLIEiJ_G0022704	Prpf19	100	100.000	ENSCGRG00001002699	Prpf19	100	100.000	Cricetulus_griseus_chok1gshd
MGP_CAROLIEiJ_G0022704	Prpf19	100	99.008	ENSCGRG00000008964	Prpf19	100	99.008	Cricetulus_griseus_crigri
MGP_CAROLIEiJ_G0022704	Prpf19	100	84.950	ENSCSEG00000010411	prpf19	100	84.950	Cynoglossus_semilaevis
MGP_CAROLIEiJ_G0022704	Prpf19	100	84.752	ENSCVAG00000012011	prpf19	100	84.752	Cyprinodon_variegatus
MGP_CAROLIEiJ_G0022704	Prpf19	100	85.347	ENSDARG00000015239	prpf19	100	85.347	Danio_rerio
MGP_CAROLIEiJ_G0022704	Prpf19	100	99.206	ENSDNOG00000005797	PRPF19	100	99.206	Dasypus_novemcinctus
MGP_CAROLIEiJ_G0022704	Prpf19	100	99.603	ENSDORG00000006906	Prpf19	100	99.603	Dipodomys_ordii
MGP_CAROLIEiJ_G0022704	Prpf19	100	65.882	FBgn0261119	Prp19	99	65.882	Drosophila_melanogaster
MGP_CAROLIEiJ_G0022704	Prpf19	100	86.905	ENSETEG00000012295	PRPF19	100	86.905	Echinops_telfairi
MGP_CAROLIEiJ_G0022704	Prpf19	83	76.667	ENSEBUG00000013075	prpf19	100	76.667	Eptatretus_burgeri
MGP_CAROLIEiJ_G0022704	Prpf19	100	98.950	ENSEASG00005008056	PRPF19	98	98.950	Equus_asinus_asinus
MGP_CAROLIEiJ_G0022704	Prpf19	100	99.405	ENSECAG00000007322	PRPF19	100	99.405	Equus_caballus
MGP_CAROLIEiJ_G0022704	Prpf19	100	78.571	ENSELUG00000004578	prpf19	100	78.571	Esox_lucius
MGP_CAROLIEiJ_G0022704	Prpf19	100	84.554	ENSELUG00000020276	-	100	84.554	Esox_lucius
MGP_CAROLIEiJ_G0022704	Prpf19	100	99.206	ENSFCAG00000013668	PRPF19	100	99.206	Felis_catus
MGP_CAROLIEiJ_G0022704	Prpf19	100	97.024	ENSFALG00000012084	PRPF19	100	97.024	Ficedula_albicollis
MGP_CAROLIEiJ_G0022704	Prpf19	84	99.289	ENSFDAG00000009420	PRPF19	99	96.811	Fukomys_damarensis
MGP_CAROLIEiJ_G0022704	Prpf19	100	84.752	ENSFHEG00000022135	prpf19	100	84.752	Fundulus_heteroclitus
MGP_CAROLIEiJ_G0022704	Prpf19	100	86.139	ENSGMOG00000014756	prpf19	100	86.139	Gadus_morhua
MGP_CAROLIEiJ_G0022704	Prpf19	100	97.024	ENSGALG00000036530	PRPF19	100	97.024	Gallus_gallus
MGP_CAROLIEiJ_G0022704	Prpf19	100	84.158	ENSGAFG00000008931	prpf19	100	84.158	Gambusia_affinis
MGP_CAROLIEiJ_G0022704	Prpf19	100	84.950	ENSGACG00000017976	prpf19	100	84.950	Gasterosteus_aculeatus
MGP_CAROLIEiJ_G0022704	Prpf19	100	97.619	ENSGAGG00000013328	PRPF19	100	97.619	Gopherus_agassizii
MGP_CAROLIEiJ_G0022704	Prpf19	100	99.405	ENSGGOG00000008648	PRPF19	100	99.405	Gorilla_gorilla
MGP_CAROLIEiJ_G0022704	Prpf19	100	84.950	ENSHBUG00000008394	prpf19	100	84.950	Haplochromis_burtoni
MGP_CAROLIEiJ_G0022704	Prpf19	100	99.206	ENSHGLG00000003934	PRPF19	100	99.206	Heterocephalus_glaber_female
MGP_CAROLIEiJ_G0022704	Prpf19	99	80.668	ENSHGLG00100010649	PRPF19	100	80.483	Heterocephalus_glaber_male
MGP_CAROLIEiJ_G0022704	Prpf19	100	83.762	ENSHCOG00000016720	prpf19	100	83.762	Hippocampus_comes
MGP_CAROLIEiJ_G0022704	Prpf19	100	85.743	ENSIPUG00000013084	prpf19	100	85.743	Ictalurus_punctatus
MGP_CAROLIEiJ_G0022704	Prpf19	100	99.206	ENSSTOG00000001598	PRPF19	100	99.206	Ictidomys_tridecemlineatus
MGP_CAROLIEiJ_G0022704	Prpf19	100	99.405	ENSJJAG00000020609	Prpf19	100	99.405	Jaculus_jaculus
MGP_CAROLIEiJ_G0022704	Prpf19	100	85.149	ENSKMAG00000010257	prpf19	100	85.149	Kryptolebias_marmoratus
MGP_CAROLIEiJ_G0022704	Prpf19	100	85.347	ENSLBEG00000027436	prpf19	100	85.347	Labrus_bergylta
MGP_CAROLIEiJ_G0022704	Prpf19	100	89.881	ENSLACG00000003434	PRPF19	100	89.881	Latimeria_chalumnae
MGP_CAROLIEiJ_G0022704	Prpf19	91	74.200	ENSLOCG00000008123	prpf19	100	74.200	Lepisosteus_oculatus
MGP_CAROLIEiJ_G0022704	Prpf19	100	96.374	ENSLAFG00000002644	PRPF19	100	96.374	Loxodonta_africana
MGP_CAROLIEiJ_G0022704	Prpf19	100	99.405	ENSMFAG00000036743	PRPF19	100	99.405	Macaca_fascicularis
MGP_CAROLIEiJ_G0022704	Prpf19	100	99.405	ENSMMUG00000014530	PRPF19	100	99.405	Macaca_mulatta
MGP_CAROLIEiJ_G0022704	Prpf19	100	99.405	ENSMNEG00000044485	PRPF19	100	99.405	Macaca_nemestrina
MGP_CAROLIEiJ_G0022704	Prpf19	100	99.405	ENSMLEG00000043312	PRPF19	100	99.405	Mandrillus_leucophaeus
MGP_CAROLIEiJ_G0022704	Prpf19	100	85.347	ENSMAMG00000006843	prpf19	100	85.347	Mastacembelus_armatus
MGP_CAROLIEiJ_G0022704	Prpf19	100	84.950	ENSMZEG00005013356	prpf19	100	84.950	Maylandia_zebra
MGP_CAROLIEiJ_G0022704	Prpf19	98	90.180	ENSMGAG00000003180	PRPF19	100	90.180	Meleagris_gallopavo
MGP_CAROLIEiJ_G0022704	Prpf19	100	99.809	ENSMAUG00000012585	Prpf19	100	99.809	Mesocricetus_auratus
MGP_CAROLIEiJ_G0022704	Prpf19	100	99.405	ENSMICG00000011236	PRPF19	100	99.405	Microcebus_murinus
MGP_CAROLIEiJ_G0022704	Prpf19	100	100.000	ENSMOCG00000010383	Prpf19	100	100.000	Microtus_ochrogaster
MGP_CAROLIEiJ_G0022704	Prpf19	100	84.921	ENSMMOG00000003138	prpf19	100	84.921	Mola_mola
MGP_CAROLIEiJ_G0022704	Prpf19	100	99.008	ENSMODG00000020338	PRPF19	100	99.008	Monodelphis_domestica
MGP_CAROLIEiJ_G0022704	Prpf19	99	76.803	ENSMALG00000010981	prpf19	99	76.803	Monopterus_albus
MGP_CAROLIEiJ_G0022704	Prpf19	100	100.000	ENSMUSG00000024735	Prpf19	100	100.000	Mus_musculus
MGP_CAROLIEiJ_G0022704	Prpf19	100	100.000	MGP_PahariEiJ_G0014198	Prpf19	100	100.000	Mus_pahari
MGP_CAROLIEiJ_G0022704	Prpf19	100	100.000	MGP_SPRETEiJ_G0023618	Prpf19	100	100.000	Mus_spretus
MGP_CAROLIEiJ_G0022704	Prpf19	100	99.206	ENSMPUG00000014432	PRPF19	100	99.206	Mustela_putorius_furo
MGP_CAROLIEiJ_G0022704	Prpf19	100	95.220	ENSMLUG00000017597	PRPF19	100	95.220	Myotis_lucifugus
MGP_CAROLIEiJ_G0022704	Prpf19	100	99.008	ENSNGAG00000012671	Prpf19	100	99.008	Nannospalax_galili
MGP_CAROLIEiJ_G0022704	Prpf19	100	84.950	ENSNBRG00000000055	prpf19	100	84.950	Neolamprologus_brichardi
MGP_CAROLIEiJ_G0022704	Prpf19	100	99.405	ENSNLEG00000013618	PRPF19	100	99.405	Nomascus_leucogenys
MGP_CAROLIEiJ_G0022704	Prpf19	99	95.171	ENSOPRG00000008630	PRPF19	100	95.171	Ochotona_princeps
MGP_CAROLIEiJ_G0022704	Prpf19	100	99.008	ENSODEG00000004043	PRPF19	100	99.008	Octodon_degus
MGP_CAROLIEiJ_G0022704	Prpf19	100	84.950	ENSONIG00000004880	prpf19	100	84.950	Oreochromis_niloticus
MGP_CAROLIEiJ_G0022704	Prpf19	100	96.381	ENSOCUG00000015689	PRPF19	100	96.381	Oryctolagus_cuniculus
MGP_CAROLIEiJ_G0022704	Prpf19	100	84.950	ENSORLG00000004666	prpf19	100	84.950	Oryzias_latipes
MGP_CAROLIEiJ_G0022704	Prpf19	100	84.950	ENSORLG00020013561	prpf19	100	84.950	Oryzias_latipes_hni
MGP_CAROLIEiJ_G0022704	Prpf19	100	84.950	ENSORLG00015022196	prpf19	100	84.950	Oryzias_latipes_hsok
MGP_CAROLIEiJ_G0022704	Prpf19	100	84.158	ENSOMEG00000004424	prpf19	100	84.158	Oryzias_melastigma
MGP_CAROLIEiJ_G0022704	Prpf19	100	99.206	ENSOGAG00000016756	PRPF19	100	99.206	Otolemur_garnettii
MGP_CAROLIEiJ_G0022704	Prpf19	100	99.603	ENSOARG00000015596	PRPF19	100	99.603	Ovis_aries
MGP_CAROLIEiJ_G0022704	Prpf19	99	96.857	ENSPPAG00000030246	PRPF19	100	96.857	Pan_paniscus
MGP_CAROLIEiJ_G0022704	Prpf19	100	99.206	ENSPPRG00000002470	PRPF19	100	99.206	Panthera_pardus
MGP_CAROLIEiJ_G0022704	Prpf19	99	99.195	ENSPTIG00000006541	PRPF19	99	99.195	Panthera_tigris_altaica
MGP_CAROLIEiJ_G0022704	Prpf19	100	99.405	ENSPTRG00000003724	PRPF19	100	99.405	Pan_troglodytes
MGP_CAROLIEiJ_G0022704	Prpf19	100	99.405	ENSPANG00000002762	PRPF19	100	99.405	Papio_anubis
MGP_CAROLIEiJ_G0022704	Prpf19	100	84.950	ENSPKIG00000019715	prpf19	100	84.950	Paramormyrops_kingsleyae
MGP_CAROLIEiJ_G0022704	Prpf19	83	97.136	ENSPSIG00000007497	PRPF19	100	97.136	Pelodiscus_sinensis
MGP_CAROLIEiJ_G0022704	Prpf19	100	84.921	ENSPMGG00000017527	prpf19	100	84.921	Periophthalmus_magnuspinnatus
MGP_CAROLIEiJ_G0022704	Prpf19	100	99.044	ENSPEMG00000019270	Prpf19	100	99.044	Peromyscus_maniculatus_bairdii
MGP_CAROLIEiJ_G0022704	Prpf19	99	98.501	ENSPCIG00000003485	PRPF19	79	98.501	Phascolarctos_cinereus
MGP_CAROLIEiJ_G0022704	Prpf19	100	84.158	ENSPFOG00000002558	prpf19	100	84.158	Poecilia_formosa
MGP_CAROLIEiJ_G0022704	Prpf19	100	84.158	ENSPLAG00000017942	prpf19	100	84.158	Poecilia_latipinna
MGP_CAROLIEiJ_G0022704	Prpf19	100	84.158	ENSPMEG00000008638	prpf19	100	84.158	Poecilia_mexicana
MGP_CAROLIEiJ_G0022704	Prpf19	100	86.364	ENSPREG00000002489	prpf19	96	86.364	Poecilia_reticulata
MGP_CAROLIEiJ_G0022704	Prpf19	100	97.732	ENSPPYG00000003202	PRPF19	92	97.732	Pongo_abelii
MGP_CAROLIEiJ_G0022704	Prpf19	100	98.810	ENSPCAG00000001930	PRPF19	100	98.810	Procavia_capensis
MGP_CAROLIEiJ_G0022704	Prpf19	100	99.364	ENSPCOG00000014017	PRPF19	100	99.364	Propithecus_coquereli
MGP_CAROLIEiJ_G0022704	Prpf19	100	99.405	ENSPVAG00000014669	PRPF19	100	99.405	Pteropus_vampyrus
MGP_CAROLIEiJ_G0022704	Prpf19	100	84.950	ENSPNYG00000000859	prpf19	100	84.950	Pundamilia_nyererei
MGP_CAROLIEiJ_G0022704	Prpf19	100	86.139	ENSPNAG00000019245	prpf19	100	86.139	Pygocentrus_nattereri
MGP_CAROLIEiJ_G0022704	Prpf19	100	100.000	ENSRNOG00000020897	Prpf19	100	100.000	Rattus_norvegicus
MGP_CAROLIEiJ_G0022704	Prpf19	100	99.405	ENSRBIG00000036672	PRPF19	100	99.405	Rhinopithecus_bieti
MGP_CAROLIEiJ_G0022704	Prpf19	100	99.405	ENSRROG00000041572	PRPF19	100	99.405	Rhinopithecus_roxellana
MGP_CAROLIEiJ_G0022704	Prpf19	100	99.206	ENSSBOG00000022840	PRPF19	100	99.206	Saimiri_boliviensis_boliviensis
MGP_CAROLIEiJ_G0022704	Prpf19	100	99.008	ENSSHAG00000009462	PRPF19	100	99.008	Sarcophilus_harrisii
MGP_CAROLIEiJ_G0022704	Prpf19	100	83.135	ENSSFOG00015001236	prpf19	100	83.135	Scleropages_formosus
MGP_CAROLIEiJ_G0022704	Prpf19	100	85.743	ENSSMAG00000002273	prpf19	100	85.743	Scophthalmus_maximus
MGP_CAROLIEiJ_G0022704	Prpf19	100	85.545	ENSSDUG00000003299	prpf19	100	85.545	Seriola_dumerili
MGP_CAROLIEiJ_G0022704	Prpf19	100	85.545	ENSSLDG00000003019	prpf19	100	85.545	Seriola_lalandi_dorsalis
MGP_CAROLIEiJ_G0022704	Prpf19	100	96.825	ENSSPUG00000019328	PRPF19	100	96.825	Sphenodon_punctatus
MGP_CAROLIEiJ_G0022704	Prpf19	100	85.743	ENSSPAG00000008546	prpf19	100	85.743	Stegastes_partitus
MGP_CAROLIEiJ_G0022704	Prpf19	100	99.405	ENSSSCG00000013107	PRPF19	100	99.405	Sus_scrofa
MGP_CAROLIEiJ_G0022704	Prpf19	100	97.024	ENSTGUG00000006319	PRPF19	100	97.024	Taeniopygia_guttata
MGP_CAROLIEiJ_G0022704	Prpf19	100	84.356	ENSTRUG00000008502	prpf19	100	84.356	Takifugu_rubripes
MGP_CAROLIEiJ_G0022704	Prpf19	100	67.921	ENSTNIG00000014219	prpf19	100	67.921	Tetraodon_nigroviridis
MGP_CAROLIEiJ_G0022704	Prpf19	100	99.206	ENSTTRG00000012476	PRPF19	100	99.206	Tursiops_truncatus
MGP_CAROLIEiJ_G0022704	Prpf19	100	99.206	ENSUAMG00000011280	PRPF19	100	99.206	Ursus_americanus
MGP_CAROLIEiJ_G0022704	Prpf19	84	98.815	ENSUMAG00000011609	PRPF19	89	93.231	Ursus_maritimus
MGP_CAROLIEiJ_G0022704	Prpf19	99	98.899	ENSVPAG00000010516	PRPF19	100	98.899	Vicugna_pacos
MGP_CAROLIEiJ_G0022704	Prpf19	100	99.206	ENSVVUG00000005291	PRPF19	100	99.206	Vulpes_vulpes
MGP_CAROLIEiJ_G0022704	Prpf19	100	85.194	ENSXETG00000011938	prpf19	100	85.194	Xenopus_tropicalis
MGP_CAROLIEiJ_G0022704	Prpf19	100	84.158	ENSXCOG00000003141	prpf19	100	84.158	Xiphophorus_couchianus
MGP_CAROLIEiJ_G0022704	Prpf19	100	84.356	ENSXMAG00000008485	prpf19	100	84.356	Xiphophorus_maculatus