EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_CAROLIEiJ_G0022845 (Gene tree)
Gene ID: 110285307
Gene Symbol: Pum3
Alias: 1110069H02Rik|D19Bwg1357e
Full Name: pumilio RNA binding family member 3
Gene Type: protein_coding
Species: Mus_caroli
Status: putative
Strand: Minus strand
Length: 34989 bases
Position: chr19:24444360-24479348
Accession: 110285307
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CAROLIEiJ_P0048465	CPL	PF08144.11	1.2e-51	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CAROLIEiJ_T0048465	-	3460	XM_021151372	MGP_CAROLIEiJ_P0048465	648 (aa)	XP_021007031	UPI000A3161BD

Gene Model

Click here to download MGP_CAROLIEiJ_G0022845's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CAROLIEiJ_G0022845's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_CAROLIEiJ_G0022845	Pum3	99	89.352	ENSG00000080608	PUM3	100	89.352	Homo_sapiens
MGP_CAROLIEiJ_G0022845	Pum3	89	57.119	ENSAPOG00000020252	pum3	99	53.707	Acanthochromis_polyacanthus
MGP_CAROLIEiJ_G0022845	Pum3	99	89.181	ENSAMEG00000012187	PUM3	100	89.181	Ailuropoda_melanoleuca
MGP_CAROLIEiJ_G0022845	Pum3	86	54.189	ENSACIG00000009786	pum3	88	55.388	Amphilophus_citrinellus
MGP_CAROLIEiJ_G0022845	Pum3	99	54.780	ENSAOCG00000004439	pum3	99	54.242	Amphiprion_ocellaris
MGP_CAROLIEiJ_G0022845	Pum3	99	54.780	ENSAPEG00000020523	pum3	99	54.242	Amphiprion_percula
MGP_CAROLIEiJ_G0022845	Pum3	82	61.682	ENSATEG00000005799	pum3	82	61.670	Anabas_testudineus
MGP_CAROLIEiJ_G0022845	Pum3	96	72.990	ENSAPLG00000002920	PUM3	100	72.990	Anas_platyrhynchos
MGP_CAROLIEiJ_G0022845	Pum3	93	67.603	ENSACAG00000003174	PUM3	99	68.430	Anolis_carolinensis
MGP_CAROLIEiJ_G0022845	Pum3	99	89.954	ENSANAG00000024520	PUM3	100	89.954	Aotus_nancymaae
MGP_CAROLIEiJ_G0022845	Pum3	96	56.000	ENSACLG00000001017	pum3	95	55.156	Astatotilapia_calliptera
MGP_CAROLIEiJ_G0022845	Pum3	91	64.618	ENSAMXG00000020911	pum3	95	64.618	Astyanax_mexicanus
MGP_CAROLIEiJ_G0022845	Pum3	99	88.563	ENSBTAG00000013357	PUM3	100	88.563	Bos_taurus
MGP_CAROLIEiJ_G0022845	Pum3	75	31.992	WBGene00014165	puf-12	64	31.992	Caenorhabditis_elegans
MGP_CAROLIEiJ_G0022845	Pum3	99	89.181	ENSCJAG00000010917	PUM3	100	89.181	Callithrix_jacchus
MGP_CAROLIEiJ_G0022845	Pum3	100	88.580	ENSCAFG00000002035	PUM3	100	88.580	Canis_familiaris
MGP_CAROLIEiJ_G0022845	Pum3	100	88.426	ENSCAFG00020026867	PUM3	100	88.426	Canis_lupus_dingo
MGP_CAROLIEiJ_G0022845	Pum3	99	88.408	ENSCHIG00000021559	PUM3	100	88.408	Capra_hircus
MGP_CAROLIEiJ_G0022845	Pum3	99	87.944	ENSTSYG00000007481	PUM3	100	87.944	Carlito_syrichta
MGP_CAROLIEiJ_G0022845	Pum3	100	84.746	ENSCAPG00000010592	-	100	84.746	Cavia_aperea
MGP_CAROLIEiJ_G0022845	Pum3	100	86.420	ENSCPOG00000008552	-	100	86.420	Cavia_porcellus
MGP_CAROLIEiJ_G0022845	Pum3	99	89.474	ENSCCAG00000032650	PUM3	100	89.335	Cebus_capucinus
MGP_CAROLIEiJ_G0022845	Pum3	99	89.938	ENSCATG00000024880	PUM3	100	89.799	Cercocebus_atys
MGP_CAROLIEiJ_G0022845	Pum3	100	88.889	ENSCLAG00000011892	PUM3	100	88.889	Chinchilla_lanigera
MGP_CAROLIEiJ_G0022845	Pum3	99	90.263	ENSCSAG00000008691	PUM3	100	90.263	Chlorocebus_sabaeus
MGP_CAROLIEiJ_G0022845	Pum3	100	68.056	ENSCHOG00000002535	PUM3	95	68.056	Choloepus_hoffmanni
MGP_CAROLIEiJ_G0022845	Pum3	99	71.957	ENSCPBG00000025470	PUM3	95	71.186	Chrysemys_picta_bellii
MGP_CAROLIEiJ_G0022845	Pum3	83	40.360	ENSCING00000024199	-	87	41.548	Ciona_intestinalis
MGP_CAROLIEiJ_G0022845	Pum3	80	41.635	ENSCSAVG00000006072	-	99	40.952	Ciona_savignyi
MGP_CAROLIEiJ_G0022845	Pum3	99	90.108	ENSCANG00000006142	PUM3	100	90.108	Colobus_angolensis_palliatus
MGP_CAROLIEiJ_G0022845	Pum3	100	93.056	ENSCGRG00001016402	Pum3	100	93.056	Cricetulus_griseus_chok1gshd
MGP_CAROLIEiJ_G0022845	Pum3	100	93.056	ENSCGRG00000010207	Pum3	100	93.056	Cricetulus_griseus_crigri
MGP_CAROLIEiJ_G0022845	Pum3	89	57.363	ENSCSEG00000001565	pum3	99	57.118	Cynoglossus_semilaevis
MGP_CAROLIEiJ_G0022845	Pum3	62	50.370	ENSCVAG00000006550	pum3	95	50.368	Cyprinodon_variegatus
MGP_CAROLIEiJ_G0022845	Pum3	94	65.287	ENSDARG00000087779	pum3	99	64.490	Danio_rerio
MGP_CAROLIEiJ_G0022845	Pum3	100	75.883	ENSDNOG00000008157	PUM3	70	76.271	Dasypus_novemcinctus
MGP_CAROLIEiJ_G0022845	Pum3	81	82.732	ENSETEG00000015331	PUM3	81	82.732	Echinops_telfairi
MGP_CAROLIEiJ_G0022845	Pum3	80	41.088	ENSEBUG00000011586	pum3	76	41.829	Eptatretus_burgeri
MGP_CAROLIEiJ_G0022845	Pum3	99	90.402	ENSEASG00005010350	PUM3	99	90.402	Equus_asinus_asinus
MGP_CAROLIEiJ_G0022845	Pum3	99	90.402	ENSECAG00000017193	PUM3	99	90.402	Equus_caballus
MGP_CAROLIEiJ_G0022845	Pum3	93	79.436	ENSEEUG00000010314	PUM3	100	79.436	Erinaceus_europaeus
MGP_CAROLIEiJ_G0022845	Pum3	96	61.987	ENSELUG00000002215	pum3	98	61.987	Esox_lucius
MGP_CAROLIEiJ_G0022845	Pum3	99	72.018	ENSFALG00000010509	PUM3	100	71.254	Ficedula_albicollis
MGP_CAROLIEiJ_G0022845	Pum3	100	88.272	ENSFDAG00000021027	PUM3	100	88.272	Fukomys_damarensis
MGP_CAROLIEiJ_G0022845	Pum3	89	58.377	ENSFHEG00000015576	pum3	99	58.377	Fundulus_heteroclitus
MGP_CAROLIEiJ_G0022845	Pum3	83	60.075	ENSGMOG00000014217	pum3	97	60.038	Gadus_morhua
MGP_CAROLIEiJ_G0022845	Pum3	99	70.200	ENSGALG00000010178	PUM3	100	70.200	Gallus_gallus
MGP_CAROLIEiJ_G0022845	Pum3	55	59.392	ENSGAFG00000001930	pum3	62	59.392	Gambusia_affinis
MGP_CAROLIEiJ_G0022845	Pum3	82	59.023	ENSGACG00000017878	pum3	96	59.013	Gasterosteus_aculeatus
MGP_CAROLIEiJ_G0022845	Pum3	99	71.870	ENSGAGG00000018983	PUM3	99	72.408	Gopherus_agassizii
MGP_CAROLIEiJ_G0022845	Pum3	99	89.645	ENSGGOG00000006143	PUM3	100	89.645	Gorilla_gorilla
MGP_CAROLIEiJ_G0022845	Pum3	99	48.923	ENSHBUG00000012903	pum3	96	49.836	Haplochromis_burtoni
MGP_CAROLIEiJ_G0022845	Pum3	100	88.117	ENSHGLG00000015868	-	100	88.117	Heterocephalus_glaber_female
MGP_CAROLIEiJ_G0022845	Pum3	100	88.117	ENSHGLG00100018825	PUM3	100	88.253	Heterocephalus_glaber_male
MGP_CAROLIEiJ_G0022845	Pum3	92	58.238	ENSHCOG00000010306	pum3	96	55.725	Hippocampus_comes
MGP_CAROLIEiJ_G0022845	Pum3	87	66.726	ENSIPUG00000024801	pum3	99	62.698	Ictalurus_punctatus
MGP_CAROLIEiJ_G0022845	Pum3	100	90.741	ENSSTOG00000009586	PUM3	100	90.741	Ictidomys_tridecemlineatus
MGP_CAROLIEiJ_G0022845	Pum3	99	87.635	ENSJJAG00000012563	Pum3	99	87.635	Jaculus_jaculus
MGP_CAROLIEiJ_G0022845	Pum3	95	55.305	ENSKMAG00000010277	pum3	98	55.326	Kryptolebias_marmoratus
MGP_CAROLIEiJ_G0022845	Pum3	99	53.651	ENSLBEG00000012213	pum3	99	53.513	Labrus_bergylta
MGP_CAROLIEiJ_G0022845	Pum3	99	66.309	ENSLACG00000008312	PUM3	100	66.309	Latimeria_chalumnae
MGP_CAROLIEiJ_G0022845	Pum3	96	65.924	ENSLOCG00000012529	pum3	99	65.924	Lepisosteus_oculatus
MGP_CAROLIEiJ_G0022845	Pum3	100	86.883	ENSLAFG00000017341	PUM3	100	86.883	Loxodonta_africana
MGP_CAROLIEiJ_G0022845	Pum3	99	90.093	ENSMFAG00000001430	PUM3	100	89.954	Macaca_fascicularis
MGP_CAROLIEiJ_G0022845	Pum3	99	90.093	ENSMMUG00000002362	PUM3	99	89.954	Macaca_mulatta
MGP_CAROLIEiJ_G0022845	Pum3	99	90.093	ENSMNEG00000035288	PUM3	100	89.954	Macaca_nemestrina
MGP_CAROLIEiJ_G0022845	Pum3	99	90.263	ENSMLEG00000034820	PUM3	100	90.263	Mandrillus_leucophaeus
MGP_CAROLIEiJ_G0022845	Pum3	82	61.049	ENSMAMG00000022861	pum3	81	61.027	Mastacembelus_armatus
MGP_CAROLIEiJ_G0022845	Pum3	96	56.173	ENSMZEG00005014205	pum3	93	55.000	Maylandia_zebra
MGP_CAROLIEiJ_G0022845	Pum3	99	63.761	ENSMGAG00000002255	PUM3	100	63.761	Meleagris_gallopavo
MGP_CAROLIEiJ_G0022845	Pum3	100	93.364	ENSMAUG00000009733	Pum3	100	93.364	Mesocricetus_auratus
MGP_CAROLIEiJ_G0022845	Pum3	99	88.854	ENSMICG00000045916	PUM3	87	88.854	Microcebus_murinus
MGP_CAROLIEiJ_G0022845	Pum3	100	93.827	ENSMOCG00000019519	-	100	93.827	Microtus_ochrogaster
MGP_CAROLIEiJ_G0022845	Pum3	99	89.490	ENSMOCG00000014830	-	100	89.026	Microtus_ochrogaster
MGP_CAROLIEiJ_G0022845	Pum3	92	52.922	ENSMMOG00000012184	pum3	99	51.014	Mola_mola
MGP_CAROLIEiJ_G0022845	Pum3	99	68.239	ENSMODG00000015417	PUM3	99	72.969	Monodelphis_domestica
MGP_CAROLIEiJ_G0022845	Pum3	97	53.523	ENSMALG00000022164	pum3	93	55.292	Monopterus_albus
MGP_CAROLIEiJ_G0022845	Pum3	100	98.611	ENSMUSG00000041360	Pum3	100	98.611	Mus_musculus
MGP_CAROLIEiJ_G0022845	Pum3	99	97.836	MGP_PahariEiJ_G0014338	Pum3	99	97.836	Mus_pahari
MGP_CAROLIEiJ_G0022845	Pum3	100	98.457	MGP_SPRETEiJ_G0023763	Pum3	100	98.457	Mus_spretus
MGP_CAROLIEiJ_G0022845	Pum3	99	86.708	ENSMPUG00000005125	PUM3	100	86.708	Mustela_putorius_furo
MGP_CAROLIEiJ_G0022845	Pum3	99	86.997	ENSMLUG00000002309	PUM3	99	86.997	Myotis_lucifugus
MGP_CAROLIEiJ_G0022845	Pum3	99	87.211	ENSNGAG00000019468	Pum3	100	87.211	Nannospalax_galili
MGP_CAROLIEiJ_G0022845	Pum3	91	54.454	ENSNBRG00000021370	pum3	79	58.730	Neolamprologus_brichardi
MGP_CAROLIEiJ_G0022845	Pum3	99	89.490	ENSNLEG00000008712	PUM3	100	89.490	Nomascus_leucogenys
MGP_CAROLIEiJ_G0022845	Pum3	75	58.727	ENSMEUG00000013606	-	96	57.231	Notamacropus_eugenii
MGP_CAROLIEiJ_G0022845	Pum3	79	75.906	ENSOPRG00000004225	-	79	75.906	Ochotona_princeps
MGP_CAROLIEiJ_G0022845	Pum3	100	87.500	ENSODEG00000003625	-	100	87.500	Octodon_degus
MGP_CAROLIEiJ_G0022845	Pum3	99	82.308	ENSODEG00000016477	-	100	82.308	Octodon_degus
MGP_CAROLIEiJ_G0022845	Pum3	99	54.531	ENSONIG00000012733	pum3	95	54.531	Oreochromis_niloticus
MGP_CAROLIEiJ_G0022845	Pum3	81	78.450	ENSOANG00000014995	PUM3	97	78.450	Ornithorhynchus_anatinus
MGP_CAROLIEiJ_G0022845	Pum3	99	88.717	ENSOCUG00000004189	-	100	88.717	Oryctolagus_cuniculus
MGP_CAROLIEiJ_G0022845	Pum3	99	87.733	ENSOCUG00000026104	-	100	87.733	Oryctolagus_cuniculus
MGP_CAROLIEiJ_G0022845	Pum3	94	54.098	ENSORLG00000014935	pum3	99	52.950	Oryzias_latipes
MGP_CAROLIEiJ_G0022845	Pum3	91	54.806	ENSORLG00020002841	pum3	99	52.950	Oryzias_latipes_hni
MGP_CAROLIEiJ_G0022845	Pum3	96	53.251	ENSORLG00015015906	pum3	99	52.786	Oryzias_latipes_hsok
MGP_CAROLIEiJ_G0022845	Pum3	91	55.068	ENSOMEG00000009427	pum3	97	51.783	Oryzias_melastigma
MGP_CAROLIEiJ_G0022845	Pum3	99	87.654	ENSOGAG00000008125	-	100	87.654	Otolemur_garnettii
MGP_CAROLIEiJ_G0022845	Pum3	99	65.443	ENSOGAG00000033481	-	99	64.067	Otolemur_garnettii
MGP_CAROLIEiJ_G0022845	Pum3	99	87.827	ENSOARG00000013337	PUM3	100	87.827	Ovis_aries
MGP_CAROLIEiJ_G0022845	Pum3	99	89.506	ENSPPAG00000041337	PUM3	100	89.506	Pan_paniscus
MGP_CAROLIEiJ_G0022845	Pum3	99	87.017	ENSPPRG00000000809	PUM3	100	87.017	Panthera_pardus
MGP_CAROLIEiJ_G0022845	Pum3	99	87.481	ENSPTIG00000021934	PUM3	100	87.481	Panthera_tigris_altaica
MGP_CAROLIEiJ_G0022845	Pum3	99	89.660	ENSPTRG00000020735	PUM3	100	89.660	Pan_troglodytes
MGP_CAROLIEiJ_G0022845	Pum3	99	90.108	ENSPANG00000025118	PUM3	100	90.108	Papio_anubis
MGP_CAROLIEiJ_G0022845	Pum3	99	62.443	ENSPKIG00000022249	pum3	99	64.298	Paramormyrops_kingsleyae
MGP_CAROLIEiJ_G0022845	Pum3	99	72.025	ENSPSIG00000016272	PUM3	100	72.025	Pelodiscus_sinensis
MGP_CAROLIEiJ_G0022845	Pum3	76	62.525	ENSPMGG00000021261	pum3	98	62.525	Periophthalmus_magnuspinnatus
MGP_CAROLIEiJ_G0022845	Pum3	89	88.679	ENSPEMG00000019340	-	100	88.679	Peromyscus_maniculatus_bairdii
MGP_CAROLIEiJ_G0022845	Pum3	94	74.267	ENSPCIG00000030598	PUM3	82	74.267	Phascolarctos_cinereus
MGP_CAROLIEiJ_G0022845	Pum3	91	56.081	ENSPFOG00000001719	pum3	94	56.081	Poecilia_formosa
MGP_CAROLIEiJ_G0022845	Pum3	91	55.684	ENSPLAG00000020010	pum3	99	53.120	Poecilia_latipinna
MGP_CAROLIEiJ_G0022845	Pum3	91	55.960	ENSPMEG00000017451	pum3	99	53.272	Poecilia_mexicana
MGP_CAROLIEiJ_G0022845	Pum3	51	46.296	ENSPREG00000019478	-	68	64.211	Poecilia_reticulata
MGP_CAROLIEiJ_G0022845	Pum3	99	89.645	ENSPPYG00000019255	PUM3	100	89.645	Pongo_abelii
MGP_CAROLIEiJ_G0022845	Pum3	100	75.772	ENSPCAG00000005797	PUM3	95	75.772	Procavia_capensis
MGP_CAROLIEiJ_G0022845	Pum3	99	88.563	ENSPCOG00000027325	PUM3	100	88.563	Propithecus_coquereli
MGP_CAROLIEiJ_G0022845	Pum3	100	85.802	ENSPVAG00000016135	PUM3	95	85.802	Pteropus_vampyrus
MGP_CAROLIEiJ_G0022845	Pum3	96	56.366	ENSPNYG00000016124	pum3	96	55.156	Pundamilia_nyererei
MGP_CAROLIEiJ_G0022845	Pum3	89	65.232	ENSPNAG00000026524	pum3	92	65.232	Pygocentrus_nattereri
MGP_CAROLIEiJ_G0022845	Pum3	99	92.890	ENSRNOG00000048356	RGD1308750	100	92.890	Rattus_norvegicus
MGP_CAROLIEiJ_G0022845	Pum3	99	93.199	ENSRNOG00000012574	Pum3	100	93.199	Rattus_norvegicus
MGP_CAROLIEiJ_G0022845	Pum3	99	90.248	ENSRBIG00000036924	PUM3	100	89.954	Rhinopithecus_bieti
MGP_CAROLIEiJ_G0022845	Pum3	99	90.108	ENSRROG00000041089	PUM3	100	90.108	Rhinopithecus_roxellana
MGP_CAROLIEiJ_G0022845	Pum3	99	89.954	ENSSBOG00000028066	PUM3	100	89.954	Saimiri_boliviensis_boliviensis
MGP_CAROLIEiJ_G0022845	Pum3	99	76.694	ENSSHAG00000003730	PUM3	100	76.425	Sarcophilus_harrisii
MGP_CAROLIEiJ_G0022845	Pum3	92	64.803	ENSSFOG00015018778	pum3	95	64.803	Scleropages_formosus
MGP_CAROLIEiJ_G0022845	Pum3	86	59.392	ENSSMAG00000013236	pum3	99	54.586	Scophthalmus_maximus
MGP_CAROLIEiJ_G0022845	Pum3	89	57.956	ENSSDUG00000001887	pum3	99	53.914	Seriola_dumerili
MGP_CAROLIEiJ_G0022845	Pum3	99	54.586	ENSSLDG00000015766	pum3	99	53.961	Seriola_lalandi_dorsalis
MGP_CAROLIEiJ_G0022845	Pum3	96	83.683	ENSSARG00000000579	PUM3	100	83.683	Sorex_araneus
MGP_CAROLIEiJ_G0022845	Pum3	99	69.136	ENSSPUG00000001707	PUM3	100	67.901	Sphenodon_punctatus
MGP_CAROLIEiJ_G0022845	Pum3	99	52.331	ENSSPAG00000003976	pum3	97	53.251	Stegastes_partitus
MGP_CAROLIEiJ_G0022845	Pum3	100	88.272	ENSSSCG00000005227	PUM3	100	88.272	Sus_scrofa
MGP_CAROLIEiJ_G0022845	Pum3	99	71.561	ENSTGUG00000005339	PUM3	100	71.561	Taeniopygia_guttata
MGP_CAROLIEiJ_G0022845	Pum3	96	55.640	ENSTRUG00000004074	pum3	79	62.023	Takifugu_rubripes
MGP_CAROLIEiJ_G0022845	Pum3	90	58.913	ENSTNIG00000010325	pum3	98	57.767	Tetraodon_nigroviridis
MGP_CAROLIEiJ_G0022845	Pum3	86	70.018	ENSTBEG00000013058	PUM3	86	70.018	Tupaia_belangeri
MGP_CAROLIEiJ_G0022845	Pum3	100	80.401	ENSTTRG00000001062	PUM3	96	80.401	Tursiops_truncatus
MGP_CAROLIEiJ_G0022845	Pum3	100	80.556	ENSUMAG00000018443	PUM3	99	84.061	Ursus_maritimus
MGP_CAROLIEiJ_G0022845	Pum3	100	87.519	ENSVPAG00000010766	PUM3	99	87.519	Vicugna_pacos
MGP_CAROLIEiJ_G0022845	Pum3	100	88.580	ENSVVUG00000006527	PUM3	100	88.580	Vulpes_vulpes
MGP_CAROLIEiJ_G0022845	Pum3	96	60.476	ENSXETG00000011707	pum3	96	60.476	Xenopus_tropicalis
MGP_CAROLIEiJ_G0022845	Pum3	91	54.153	ENSXCOG00000006725	pum3	87	56.870	Xiphophorus_couchianus
MGP_CAROLIEiJ_G0022845	Pum3	91	56.271	ENSXMAG00000002926	pum3	89	55.786	Xiphophorus_maculatus