EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: MGP_CAROLIEiJ_G0022872 (Gene tree)
Gene ID: 110285295
Gene Symbol: Cstf2t
Alias: 64kDa|tCstF-64
Full Name: cleavage stimulation factor subunit 2 tau variant
Gene Type: protein_coding
Species: Mus_caroli
Status: putative
Strand: Plus strand
Length: 3720 bases
Position: chr19:28121180-28124899
Accession: 110285295
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CAROLIEiJ_P0048563	RRM_1	PF00076.22	8.2e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CAROLIEiJ_T0048563	-	3720	XM_021151358	MGP_CAROLIEiJ_P0048563	626 (aa)	XP_021007017	UPI000A318478

Gene Model

Click here to download MGP_CAROLIEiJ_G0022872's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CAROLIEiJ_G0022872's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CAROLIEiJ_G0022872	Cstf2t	99	64.506	MGP_CAROLIEiJ_G0033383	Cstf2	86	87.342

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_CAROLIEiJ_G0022872	Cstf2t	100	88.766	ENSG00000177613	CSTF2T	82	89.749	Homo_sapiens
MGP_CAROLIEiJ_G0022872	Cstf2t	100	86.054	ENSAMEG00000015766	CSTF2T	100	82.250	Ailuropoda_melanoleuca
MGP_CAROLIEiJ_G0022872	Cstf2t	54	78.363	ENSANAG00000027508	-	89	79.179	Aotus_nancymaae
MGP_CAROLIEiJ_G0022872	Cstf2t	100	85.780	ENSBTAG00000018406	CSTF2T	78	89.300	Bos_taurus
MGP_CAROLIEiJ_G0022872	Cstf2t	54	72.353	ENSCJAG00000039083	-	93	73.529	Callithrix_jacchus
MGP_CAROLIEiJ_G0022872	Cstf2t	54	80.000	ENSCJAG00000011554	-	97	79.412	Callithrix_jacchus
MGP_CAROLIEiJ_G0022872	Cstf2t	91	88.158	ENSCAFG00000015567	CSTF2T	99	96.825	Canis_familiaris
MGP_CAROLIEiJ_G0022872	Cstf2t	100	87.092	ENSCHIG00000016590	CSTF2T	79	87.938	Capra_hircus
MGP_CAROLIEiJ_G0022872	Cstf2t	100	86.054	ENSTSYG00000007750	CSTF2T	96	77.647	Carlito_syrichta
MGP_CAROLIEiJ_G0022872	Cstf2t	100	86.314	ENSCPOG00000004195	CSTF2T	100	83.826	Cavia_porcellus
MGP_CAROLIEiJ_G0022872	Cstf2t	54	77.647	ENSCCAG00000020816	-	88	79.179	Cebus_capucinus
MGP_CAROLIEiJ_G0022872	Cstf2t	54	77.941	ENSCATG00000041868	-	95	79.412	Cercocebus_atys
MGP_CAROLIEiJ_G0022872	Cstf2t	100	84.317	ENSCLAG00000017916	CSTF2T	100	84.006	Chinchilla_lanigera
MGP_CAROLIEiJ_G0022872	Cstf2t	100	88.291	ENSCSAG00000018437	CSTF2T	82	89.555	Chlorocebus_sabaeus
MGP_CAROLIEiJ_G0022872	Cstf2t	70	91.273	ENSCHOG00000011888	-	68	91.273	Choloepus_hoffmanni
MGP_CAROLIEiJ_G0022872	Cstf2t	53	77.910	ENSCANG00000005843	-	87	80.000	Colobus_angolensis_palliatus
MGP_CAROLIEiJ_G0022872	Cstf2t	100	92.633	ENSCGRG00001003222	Cstf2t	80	95.331	Cricetulus_griseus_chok1gshd
MGP_CAROLIEiJ_G0022872	Cstf2t	100	93.407	ENSCGRG00000008682	Cstf2t	80	95.331	Cricetulus_griseus_crigri
MGP_CAROLIEiJ_G0022872	Cstf2t	64	89.474	ENSCSEG00000002596	-	53	88.614	Cynoglossus_semilaevis
MGP_CAROLIEiJ_G0022872	Cstf2t	100	85.127	ENSDNOG00000003283	CSTF2T	100	82.911	Dasypus_novemcinctus
MGP_CAROLIEiJ_G0022872	Cstf2t	81	89.084	ENSDORG00000011245	Cstf2t	80	89.126	Dipodomys_ordii
MGP_CAROLIEiJ_G0022872	Cstf2t	100	88.924	ENSEASG00005012929	CSTF2T	100	84.810	Equus_asinus_asinus
MGP_CAROLIEiJ_G0022872	Cstf2t	100	88.383	ENSECAG00000004701	CSTF2T	100	84.144	Equus_caballus
MGP_CAROLIEiJ_G0022872	Cstf2t	83	90.306	ENSELUG00000004079	-	77	88.265	Esox_lucius
MGP_CAROLIEiJ_G0022872	Cstf2t	100	89.223	ENSFCAG00000046300	CSTF2T	100	84.945	Felis_catus
MGP_CAROLIEiJ_G0022872	Cstf2t	100	83.591	ENSFDAG00000021170	CSTF2T	81	88.697	Fukomys_damarensis
MGP_CAROLIEiJ_G0022872	Cstf2t	100	87.342	ENSGGOG00000042388	-	83	88.975	Gorilla_gorilla
MGP_CAROLIEiJ_G0022872	Cstf2t	100	87.342	ENSGGOG00000036416	-	83	88.975	Gorilla_gorilla
MGP_CAROLIEiJ_G0022872	Cstf2t	81	86.207	ENSHGLG00000015478	CSTF2T	100	84.722	Heterocephalus_glaber_female
MGP_CAROLIEiJ_G0022872	Cstf2t	81	86.207	ENSHGLG00100000336	CSTF2T	81	86.450	Heterocephalus_glaber_male
MGP_CAROLIEiJ_G0022872	Cstf2t	100	87.797	ENSSTOG00000026303	CSTF2T	100	85.578	Ictidomys_tridecemlineatus
MGP_CAROLIEiJ_G0022872	Cstf2t	100	80.349	ENSLAFG00000002058	CSTF2T	100	80.190	Loxodonta_africana
MGP_CAROLIEiJ_G0022872	Cstf2t	53	77.778	ENSMFAG00000042009	-	93	79.688	Macaca_fascicularis
MGP_CAROLIEiJ_G0022872	Cstf2t	54	77.419	ENSMMUG00000042906	-	99	78.886	Macaca_mulatta
MGP_CAROLIEiJ_G0022872	Cstf2t	53	77.778	ENSMNEG00000031410	-	93	79.688	Macaca_nemestrina
MGP_CAROLIEiJ_G0022872	Cstf2t	100	96.178	ENSMAUG00000006359	Cstf2t	100	96.178	Mesocricetus_auratus
MGP_CAROLIEiJ_G0022872	Cstf2t	100	80.751	ENSMICG00000030551	-	100	81.585	Microcebus_murinus
MGP_CAROLIEiJ_G0022872	Cstf2t	100	86.414	ENSMICG00000000867	-	83	89.961	Microcebus_murinus
MGP_CAROLIEiJ_G0022872	Cstf2t	100	89.151	ENSMOCG00000020428	Cstf2t	81	93.411	Microtus_ochrogaster
MGP_CAROLIEiJ_G0022872	Cstf2t	50	86.792	ENSMALG00000008842	-	98	79.032	Monopterus_albus
MGP_CAROLIEiJ_G0022872	Cstf2t	100	97.017	ENSMUSG00000053536	Cstf2t	100	97.017	Mus_musculus
MGP_CAROLIEiJ_G0022872	Cstf2t	82	95.211	MGP_PahariEiJ_G0014365	Cstf2t	100	95.652	Mus_pahari
MGP_CAROLIEiJ_G0022872	Cstf2t	100	97.645	MGP_SPRETEiJ_G0023790	Cstf2t	100	97.645	Mus_spretus
MGP_CAROLIEiJ_G0022872	Cstf2t	100	87.639	ENSMPUG00000020141	CSTF2T	100	84.152	Mustela_putorius_furo
MGP_CAROLIEiJ_G0022872	Cstf2t	100	79.081	ENSMLUG00000027140	-	100	77.813	Myotis_lucifugus
MGP_CAROLIEiJ_G0022872	Cstf2t	100	85.583	ENSMLUG00000011187	-	78	87.209	Myotis_lucifugus
MGP_CAROLIEiJ_G0022872	Cstf2t	100	91.284	ENSNGAG00000003304	Cstf2t	100	87.797	Nannospalax_galili
MGP_CAROLIEiJ_G0022872	Cstf2t	100	84.409	ENSNLEG00000012025	CSTF2T	83	85.192	Nomascus_leucogenys
MGP_CAROLIEiJ_G0022872	Cstf2t	100	83.333	ENSODEG00000012386	CSTF2T	100	80.685	Octodon_degus
MGP_CAROLIEiJ_G0022872	Cstf2t	100	73.851	ENSOCUG00000004647	-	89	83.591	Oryctolagus_cuniculus
MGP_CAROLIEiJ_G0022872	Cstf2t	100	88.273	ENSOGAG00000014565	CSTF2T	100	85.420	Otolemur_garnettii
MGP_CAROLIEiJ_G0022872	Cstf2t	100	87.231	ENSOARG00000013688	-	78	89.494	Ovis_aries
MGP_CAROLIEiJ_G0022872	Cstf2t	100	88.144	ENSOARG00000019124	-	80	89.494	Ovis_aries
MGP_CAROLIEiJ_G0022872	Cstf2t	53	77.015	ENSPPAG00000032242	-	91	79.062	Pan_paniscus
MGP_CAROLIEiJ_G0022872	Cstf2t	100	89.065	ENSPPRG00000018659	CSTF2T	100	84.628	Panthera_pardus
MGP_CAROLIEiJ_G0022872	Cstf2t	100	86.846	ENSPTIG00000021145	CSTF2T	100	83.201	Panthera_tigris_altaica
MGP_CAROLIEiJ_G0022872	Cstf2t	53	77.015	ENSPTRG00000043097	-	91	79.062	Pan_troglodytes
MGP_CAROLIEiJ_G0022872	Cstf2t	53	77.778	ENSPANG00000029734	-	93	79.688	Papio_anubis
MGP_CAROLIEiJ_G0022872	Cstf2t	99	51.190	ENSPFOG00000016756	CSTF2T	94	65.546	Poecilia_formosa
MGP_CAROLIEiJ_G0022872	Cstf2t	100	89.258	ENSPPYG00000002441	CSTF2T	100	84.992	Pongo_abelii
MGP_CAROLIEiJ_G0022872	Cstf2t	100	84.227	ENSPCAG00000000046	CSTF2T	100	84.227	Procavia_capensis
MGP_CAROLIEiJ_G0022872	Cstf2t	99	86.349	ENSPCOG00000010982	CSTF2T	99	85.397	Propithecus_coquereli
MGP_CAROLIEiJ_G0022872	Cstf2t	100	88.114	ENSPVAG00000006274	CSTF2T	100	84.311	Pteropus_vampyrus
MGP_CAROLIEiJ_G0022872	Cstf2t	100	97.302	ENSRNOG00000050289	Cstf2t	100	97.302	Rattus_norvegicus
MGP_CAROLIEiJ_G0022872	Cstf2t	100	87.500	ENSRBIG00000029324	CSTF2T	83	88.975	Rhinopithecus_bieti
MGP_CAROLIEiJ_G0022872	Cstf2t	100	87.658	ENSRROG00000042507	CSTF2T	83	89.168	Rhinopithecus_roxellana
MGP_CAROLIEiJ_G0022872	Cstf2t	100	87.639	ENSSBOG00000022638	CSTF2T	93	79.472	Saimiri_boliviensis_boliviensis
MGP_CAROLIEiJ_G0022872	Cstf2t	80	90.863	ENSSDUG00000001049	-	96	85.455	Seriola_dumerili
MGP_CAROLIEiJ_G0022872	Cstf2t	80	90.863	ENSSLDG00000010056	-	96	85.455	Seriola_lalandi_dorsalis
MGP_CAROLIEiJ_G0022872	Cstf2t	88	89.811	ENSSARG00000002013	-	62	98.544	Sorex_araneus
MGP_CAROLIEiJ_G0022872	Cstf2t	100	89.857	ENSSSCG00000010430	CSTF2T	100	85.895	Sus_scrofa
MGP_CAROLIEiJ_G0022872	Cstf2t	99	59.447	ENSTRUG00000004323	-	51	88.889	Takifugu_rubripes
MGP_CAROLIEiJ_G0022872	Cstf2t	100	74.563	ENSTBEG00000014379	CSTF2T	80	75.486	Tupaia_belangeri
MGP_CAROLIEiJ_G0022872	Cstf2t	100	89.540	ENSTTRG00000003341	CSTF2T	100	85.261	Tursiops_truncatus
MGP_CAROLIEiJ_G0022872	Cstf2t	100	85.890	ENSUMAG00000011141	CSTF2T	79	88.953	Ursus_maritimus
MGP_CAROLIEiJ_G0022872	Cstf2t	62	96.020	ENSVVUG00000002575	CSTF2T	97	95.631	Vulpes_vulpes