EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_CAROLIEiJ_G0022957 (Gene tree)
Gene ID: 110285730
Gene Symbol: Rrp12
Alias: -
Full Name: ribosomal RNA processing 12 homolog (S. cerevisiae)
Gene Type: protein_coding
Species: Mus_caroli
Status: putative
Strand: Minus strand
Length: 36018 bases
Position: chr19:38536595-38572612
Accession: 2147437
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CAROLIEiJ_P0048787	NUC173	PF08161.12	3.7e-75	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CAROLIEiJ_T0048787	-	4355	-	MGP_CAROLIEiJ_P0048787	1307 (aa)	-	-

Gene Model

Click here to download MGP_CAROLIEiJ_G0022957's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CAROLIEiJ_G0022957's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_CAROLIEiJ_G0022957	Rrp12	99	88.829	ENSG00000052749	RRP12	100	96.875	Homo_sapiens
MGP_CAROLIEiJ_G0022957	Rrp12	99	62.943	ENSAPOG00000013355	rrp12	99	62.586	Acanthochromis_polyacanthus
MGP_CAROLIEiJ_G0022957	Rrp12	99	88.006	ENSAMEG00000000134	RRP12	99	88.464	Ailuropoda_melanoleuca
MGP_CAROLIEiJ_G0022957	Rrp12	99	63.566	ENSACIG00000022673	rrp12	99	63.664	Amphilophus_citrinellus
MGP_CAROLIEiJ_G0022957	Rrp12	99	63.713	ENSAOCG00000016149	rrp12	99	63.539	Amphiprion_ocellaris
MGP_CAROLIEiJ_G0022957	Rrp12	99	63.413	ENSAPEG00000016023	rrp12	99	63.158	Amphiprion_percula
MGP_CAROLIEiJ_G0022957	Rrp12	99	62.664	ENSATEG00000022627	rrp12	99	62.538	Anabas_testudineus
MGP_CAROLIEiJ_G0022957	Rrp12	96	64.539	ENSAPLG00000014387	RRP12	99	64.618	Anas_platyrhynchos
MGP_CAROLIEiJ_G0022957	Rrp12	99	64.706	ENSACAG00000002175	RRP12	99	64.859	Anolis_carolinensis
MGP_CAROLIEiJ_G0022957	Rrp12	99	87.807	ENSANAG00000037485	RRP12	99	89.474	Aotus_nancymaae
MGP_CAROLIEiJ_G0022957	Rrp12	99	62.826	ENSACLG00000007354	rrp12	99	63.082	Astatotilapia_calliptera
MGP_CAROLIEiJ_G0022957	Rrp12	99	60.383	ENSAMXG00000012852	rrp12	99	61.056	Astyanax_mexicanus
MGP_CAROLIEiJ_G0022957	Rrp12	99	88.770	ENSBTAG00000002191	RRP12	99	88.694	Bos_taurus
MGP_CAROLIEiJ_G0022957	Rrp12	85	87.129	ENSCJAG00000016549	-	99	87.849	Callithrix_jacchus
MGP_CAROLIEiJ_G0022957	Rrp12	99	88.168	ENSCAFG00000009043	RRP12	99	88.397	Canis_familiaris
MGP_CAROLIEiJ_G0022957	Rrp12	99	88.168	ENSCAFG00020005991	RRP12	99	88.397	Canis_lupus_dingo
MGP_CAROLIEiJ_G0022957	Rrp12	99	85.995	ENSCHIG00000011876	RRP12	99	85.541	Capra_hircus
MGP_CAROLIEiJ_G0022957	Rrp12	54	82.720	ENSTSYG00000030210	-	99	83.003	Carlito_syrichta
MGP_CAROLIEiJ_G0022957	Rrp12	96	81.013	ENSCAPG00000008991	RRP12	98	80.934	Cavia_aperea
MGP_CAROLIEiJ_G0022957	Rrp12	99	89.059	ENSCPOG00000004215	RRP12	99	88.982	Cavia_porcellus
MGP_CAROLIEiJ_G0022957	Rrp12	80	88.462	ENSCCAG00000024088	RRP12	99	92.541	Cebus_capucinus
MGP_CAROLIEiJ_G0022957	Rrp12	70	85.141	ENSCCAG00000033123	-	83	86.009	Cebus_capucinus
MGP_CAROLIEiJ_G0022957	Rrp12	99	83.780	ENSCATG00000045310	RRP12	99	83.780	Cercocebus_atys
MGP_CAROLIEiJ_G0022957	Rrp12	99	89.059	ENSCLAG00000003753	RRP12	99	89.212	Chinchilla_lanigera
MGP_CAROLIEiJ_G0022957	Rrp12	88	88.668	ENSCSAG00000005877	RRP12	99	89.100	Chlorocebus_sabaeus
MGP_CAROLIEiJ_G0022957	Rrp12	58	92.308	ENSCHOG00000003095	-	61	92.308	Choloepus_hoffmanni
MGP_CAROLIEiJ_G0022957	Rrp12	94	72.431	ENSCPBG00000011935	RRP12	97	72.431	Chrysemys_picta_bellii
MGP_CAROLIEiJ_G0022957	Rrp12	64	39.195	ENSCSAVG00000006059	-	99	38.985	Ciona_savignyi
MGP_CAROLIEiJ_G0022957	Rrp12	99	88.982	ENSCANG00000031653	RRP12	99	90.789	Colobus_angolensis_palliatus
MGP_CAROLIEiJ_G0022957	Rrp12	90	93.401	ENSCGRG00001004338	Rrp12	99	93.401	Cricetulus_griseus_chok1gshd
MGP_CAROLIEiJ_G0022957	Rrp12	99	92.261	ENSCGRG00000011965	Rrp12	99	92.261	Cricetulus_griseus_crigri
MGP_CAROLIEiJ_G0022957	Rrp12	99	61.026	ENSCSEG00000007799	rrp12	99	61.162	Cynoglossus_semilaevis
MGP_CAROLIEiJ_G0022957	Rrp12	99	63.685	ENSCVAG00000003418	rrp12	99	63.435	Cyprinodon_variegatus
MGP_CAROLIEiJ_G0022957	Rrp12	99	60.766	ENSDARG00000022410	rrp12	99	61.320	Danio_rerio
MGP_CAROLIEiJ_G0022957	Rrp12	99	86.225	ENSDNOG00000005120	RRP12	99	85.388	Dasypus_novemcinctus
MGP_CAROLIEiJ_G0022957	Rrp12	99	89.373	ENSDORG00000009199	Rrp12	99	89.373	Dipodomys_ordii
MGP_CAROLIEiJ_G0022957	Rrp12	98	30.101	FBgn0030504	CG2691	99	30.150	Drosophila_melanogaster
MGP_CAROLIEiJ_G0022957	Rrp12	93	74.555	ENSETEG00000002455	RRP12	93	74.110	Echinops_telfairi
MGP_CAROLIEiJ_G0022957	Rrp12	82	57.333	ENSEBUG00000006555	rrp12	98	63.830	Eptatretus_burgeri
MGP_CAROLIEiJ_G0022957	Rrp12	99	89.135	ENSEASG00005008693	RRP12	99	89.212	Equus_asinus_asinus
MGP_CAROLIEiJ_G0022957	Rrp12	94	89.015	ENSECAG00000010892	RRP12	99	89.097	Equus_caballus
MGP_CAROLIEiJ_G0022957	Rrp12	64	82.275	ENSEEUG00000005447	-	65	82.275	Erinaceus_europaeus
MGP_CAROLIEiJ_G0022957	Rrp12	99	63.400	ENSELUG00000010510	rrp12	100	62.991	Esox_lucius
MGP_CAROLIEiJ_G0022957	Rrp12	99	88.168	ENSFCAG00000028639	RRP12	99	90.789	Felis_catus
MGP_CAROLIEiJ_G0022957	Rrp12	94	70.301	ENSFALG00000008458	RRP12	99	70.057	Ficedula_albicollis
MGP_CAROLIEiJ_G0022957	Rrp12	99	88.217	ENSFDAG00000019108	RRP12	95	88.370	Fukomys_damarensis
MGP_CAROLIEiJ_G0022957	Rrp12	99	57.604	ENSFHEG00000004148	rrp12	99	57.328	Fundulus_heteroclitus
MGP_CAROLIEiJ_G0022957	Rrp12	99	57.863	ENSGMOG00000004188	rrp12	99	57.939	Gadus_morhua
MGP_CAROLIEiJ_G0022957	Rrp12	99	68.931	ENSGALG00000041331	RRP12	96	70.723	Gallus_gallus
MGP_CAROLIEiJ_G0022957	Rrp12	99	63.259	ENSGAFG00000009038	rrp12	99	63.053	Gambusia_affinis
MGP_CAROLIEiJ_G0022957	Rrp12	99	60.829	ENSGACG00000007175	rrp12	99	60.564	Gasterosteus_aculeatus
MGP_CAROLIEiJ_G0022957	Rrp12	66	74.942	ENSGAGG00000019169	RRP12	96	74.942	Gopherus_agassizii
MGP_CAROLIEiJ_G0022957	Rrp12	99	89.059	ENSGGOG00000014850	RRP12	99	90.789	Gorilla_gorilla
MGP_CAROLIEiJ_G0022957	Rrp12	99	62.980	ENSHBUG00000023527	rrp12	99	63.234	Haplochromis_burtoni
MGP_CAROLIEiJ_G0022957	Rrp12	99	88.370	ENSHGLG00000016772	RRP12	99	88.523	Heterocephalus_glaber_female
MGP_CAROLIEiJ_G0022957	Rrp12	99	88.370	ENSHGLG00100015110	RRP12	99	88.523	Heterocephalus_glaber_male
MGP_CAROLIEiJ_G0022957	Rrp12	99	61.639	ENSHCOG00000019519	rrp12	99	61.639	Hippocampus_comes
MGP_CAROLIEiJ_G0022957	Rrp12	99	60.199	ENSIPUG00000000311	RRP12	99	62.468	Ictalurus_punctatus
MGP_CAROLIEiJ_G0022957	Rrp12	99	90.207	ENSSTOG00000006515	RRP12	99	90.207	Ictidomys_tridecemlineatus
MGP_CAROLIEiJ_G0022957	Rrp12	96	90.238	ENSJJAG00000000110	Rrp12	99	90.238	Jaculus_jaculus
MGP_CAROLIEiJ_G0022957	Rrp12	99	63.251	ENSKMAG00000020621	rrp12	99	63.093	Kryptolebias_marmoratus
MGP_CAROLIEiJ_G0022957	Rrp12	99	60.643	ENSLBEG00000015335	rrp12	99	60.873	Labrus_bergylta
MGP_CAROLIEiJ_G0022957	Rrp12	78	57.101	ENSLACG00000016633	RRP12	81	66.667	Latimeria_chalumnae
MGP_CAROLIEiJ_G0022957	Rrp12	99	61.774	ENSLOCG00000003846	rrp12	99	61.850	Lepisosteus_oculatus
MGP_CAROLIEiJ_G0022957	Rrp12	99	89.169	ENSLAFG00000015965	RRP12	99	88.787	Loxodonta_africana
MGP_CAROLIEiJ_G0022957	Rrp12	99	89.365	ENSMFAG00000041558	RRP12	99	90.132	Macaca_fascicularis
MGP_CAROLIEiJ_G0022957	Rrp12	99	89.365	ENSMMUG00000019634	RRP12	99	90.132	Macaca_mulatta
MGP_CAROLIEiJ_G0022957	Rrp12	99	85.157	ENSMNEG00000036759	RRP12	99	90.132	Macaca_nemestrina
MGP_CAROLIEiJ_G0022957	Rrp12	99	84.009	ENSMLEG00000041317	RRP12	99	90.789	Mandrillus_leucophaeus
MGP_CAROLIEiJ_G0022957	Rrp12	99	61.787	ENSMAMG00000002964	rrp12	99	62.175	Mastacembelus_armatus
MGP_CAROLIEiJ_G0022957	Rrp12	99	62.980	ENSMZEG00005003241	rrp12	99	63.234	Maylandia_zebra
MGP_CAROLIEiJ_G0022957	Rrp12	99	67.912	ENSMGAG00000009829	RRP12	99	67.759	Meleagris_gallopavo
MGP_CAROLIEiJ_G0022957	Rrp12	99	90.298	ENSMAUG00000020743	Rrp12	99	90.575	Mesocricetus_auratus
MGP_CAROLIEiJ_G0022957	Rrp12	99	88.991	ENSMICG00000007624	RRP12	99	88.991	Microcebus_murinus
MGP_CAROLIEiJ_G0022957	Rrp12	99	94.176	ENSMOCG00000006753	Rrp12	99	94.176	Microtus_ochrogaster
MGP_CAROLIEiJ_G0022957	Rrp12	99	61.963	ENSMMOG00000010708	rrp12	99	62.040	Mola_mola
MGP_CAROLIEiJ_G0022957	Rrp12	99	77.650	ENSMODG00000004315	RRP12	99	77.914	Monodelphis_domestica
MGP_CAROLIEiJ_G0022957	Rrp12	99	59.555	ENSMALG00000016560	rrp12	99	63.453	Monopterus_albus
MGP_CAROLIEiJ_G0022957	Rrp12	99	98.086	ENSMUSG00000035049	Rrp12	99	98.086	Mus_musculus
MGP_CAROLIEiJ_G0022957	Rrp12	99	97.088	MGP_PahariEiJ_G0014447	Rrp12	99	97.088	Mus_pahari
MGP_CAROLIEiJ_G0022957	Rrp12	99	98.315	MGP_SPRETEiJ_G0023878	Rrp12	99	98.315	Mus_spretus
MGP_CAROLIEiJ_G0022957	Rrp12	99	88.321	ENSMPUG00000017046	RRP12	99	88.168	Mustela_putorius_furo
MGP_CAROLIEiJ_G0022957	Rrp12	99	88.940	ENSMLUG00000017160	RRP12	99	89.092	Myotis_lucifugus
MGP_CAROLIEiJ_G0022957	Rrp12	99	91.807	ENSNGAG00000024144	Rrp12	99	91.884	Nannospalax_galili
MGP_CAROLIEiJ_G0022957	Rrp12	99	62.327	ENSNBRG00000009987	rrp12	99	62.357	Neolamprologus_brichardi
MGP_CAROLIEiJ_G0022957	Rrp12	92	90.789	ENSNLEG00000013762	RRP12	99	90.789	Nomascus_leucogenys
MGP_CAROLIEiJ_G0022957	Rrp12	99	72.644	ENSMEUG00000003185	RRP12	99	72.490	Notamacropus_eugenii
MGP_CAROLIEiJ_G0022957	Rrp12	94	82.500	ENSOPRG00000005001	RRP12	94	83.307	Ochotona_princeps
MGP_CAROLIEiJ_G0022957	Rrp12	99	87.443	ENSODEG00000016439	RRP12	99	87.825	Octodon_degus
MGP_CAROLIEiJ_G0022957	Rrp12	99	63.251	ENSONIG00000009528	rrp12	99	63.616	Oreochromis_niloticus
MGP_CAROLIEiJ_G0022957	Rrp12	99	71.820	ENSOANG00000006560	RRP12	99	71.820	Ornithorhynchus_anatinus
MGP_CAROLIEiJ_G0022957	Rrp12	99	88.141	ENSOCUG00000005662	RRP12	99	88.829	Oryctolagus_cuniculus
MGP_CAROLIEiJ_G0022957	Rrp12	99	63.566	ENSORLG00000008688	rrp12	99	64.597	Oryzias_latipes
MGP_CAROLIEiJ_G0022957	Rrp12	97	63.850	ENSORLG00020002355	rrp12	99	64.006	Oryzias_latipes_hni
MGP_CAROLIEiJ_G0022957	Rrp12	99	63.643	ENSORLG00015006709	rrp12	99	63.817	Oryzias_latipes_hsok
MGP_CAROLIEiJ_G0022957	Rrp12	97	64.163	ENSOMEG00000002609	rrp12	99	64.476	Oryzias_melastigma
MGP_CAROLIEiJ_G0022957	Rrp12	99	87.814	ENSOGAG00000001626	RRP12	99	87.357	Otolemur_garnettii
MGP_CAROLIEiJ_G0022957	Rrp12	99	87.262	ENSOARG00000009681	RRP12	99	87.185	Ovis_aries
MGP_CAROLIEiJ_G0022957	Rrp12	99	86.458	ENSPPAG00000043885	RRP12	99	90.789	Pan_paniscus
MGP_CAROLIEiJ_G0022957	Rrp12	99	88.092	ENSPPRG00000002029	RRP12	99	91.447	Panthera_pardus
MGP_CAROLIEiJ_G0022957	Rrp12	97	87.250	ENSPTIG00000004428	RRP12	99	90.789	Panthera_tigris_altaica
MGP_CAROLIEiJ_G0022957	Rrp12	99	86.458	ENSPTRG00000002806	RRP12	99	90.789	Pan_troglodytes
MGP_CAROLIEiJ_G0022957	Rrp12	99	89.288	ENSPANG00000021360	RRP12	99	90.789	Papio_anubis
MGP_CAROLIEiJ_G0022957	Rrp12	99	63.470	ENSPKIG00000016516	rrp12	99	63.546	Paramormyrops_kingsleyae
MGP_CAROLIEiJ_G0022957	Rrp12	99	61.615	ENSPMGG00000020217	rrp12	99	61.421	Periophthalmus_magnuspinnatus
MGP_CAROLIEiJ_G0022957	Rrp12	99	94.721	ENSPEMG00000008437	Rrp12	99	94.721	Peromyscus_maniculatus_bairdii
MGP_CAROLIEiJ_G0022957	Rrp12	99	47.498	ENSPMAG00000007493	rrp12	87	57.024	Petromyzon_marinus
MGP_CAROLIEiJ_G0022957	Rrp12	96	82.886	ENSPCIG00000002157	RRP12	100	77.837	Phascolarctos_cinereus
MGP_CAROLIEiJ_G0022957	Rrp12	99	62.837	ENSPFOG00000014975	rrp12	99	62.595	Poecilia_formosa
MGP_CAROLIEiJ_G0022957	Rrp12	99	62.606	ENSPLAG00000009840	rrp12	99	62.404	Poecilia_latipinna
MGP_CAROLIEiJ_G0022957	Rrp12	99	62.992	ENSPMEG00000021871	rrp12	99	62.787	Poecilia_mexicana
MGP_CAROLIEiJ_G0022957	Rrp12	99	62.481	ENSPREG00000020950	rrp12	99	62.281	Poecilia_reticulata
MGP_CAROLIEiJ_G0022957	Rrp12	99	87.070	ENSPPYG00000002528	RRP12	99	87.758	Pongo_abelii
MGP_CAROLIEiJ_G0022957	Rrp12	94	90.960	ENSPCAG00000008967	RRP12	94	90.960	Procavia_capensis
MGP_CAROLIEiJ_G0022957	Rrp12	99	89.962	ENSPCOG00000014009	RRP12	99	89.962	Propithecus_coquereli
MGP_CAROLIEiJ_G0022957	Rrp12	99	84.186	ENSPVAG00000003370	RRP12	100	84.416	Pteropus_vampyrus
MGP_CAROLIEiJ_G0022957	Rrp12	99	63.134	ENSPNYG00000009451	rrp12	99	63.387	Pundamilia_nyererei
MGP_CAROLIEiJ_G0022957	Rrp12	99	61.115	ENSPNAG00000007658	rrp12	99	61.803	Pygocentrus_nattereri
MGP_CAROLIEiJ_G0022957	Rrp12	99	95.862	ENSRNOG00000048495	Rrp12	99	95.862	Rattus_norvegicus
MGP_CAROLIEiJ_G0022957	Rrp12	99	89.212	ENSRBIG00000021296	RRP12	99	90.789	Rhinopithecus_bieti
MGP_CAROLIEiJ_G0022957	Rrp12	99	89.365	ENSRROG00000032482	RRP12	99	90.789	Rhinopithecus_roxellana
MGP_CAROLIEiJ_G0022957	Rrp12	99	87.911	ENSSBOG00000030992	RRP12	100	88.816	Saimiri_boliviensis_boliviensis
MGP_CAROLIEiJ_G0022957	Rrp12	99	76.894	ENSSHAG00000018275	RRP12	99	77.200	Sarcophilus_harrisii
MGP_CAROLIEiJ_G0022957	Rrp12	99	62.949	ENSSFOG00015016400	rrp12	99	62.872	Scleropages_formosus
MGP_CAROLIEiJ_G0022957	Rrp12	99	61.681	ENSSMAG00000004047	rrp12	99	62.395	Scophthalmus_maximus
MGP_CAROLIEiJ_G0022957	Rrp12	99	62.519	ENSSDUG00000022871	rrp12	99	62.366	Seriola_dumerili
MGP_CAROLIEiJ_G0022957	Rrp12	99	62.481	ENSSLDG00000003038	rrp12	99	62.366	Seriola_lalandi_dorsalis
MGP_CAROLIEiJ_G0022957	Rrp12	99	67.401	ENSSPUG00000012221	RRP12	99	67.912	Sphenodon_punctatus
MGP_CAROLIEiJ_G0022957	Rrp12	99	63.482	ENSSPAG00000002261	rrp12	99	63.158	Stegastes_partitus
MGP_CAROLIEiJ_G0022957	Rrp12	99	88.923	ENSSSCG00000010514	RRP12	99	88.923	Sus_scrofa
MGP_CAROLIEiJ_G0022957	Rrp12	89	67.845	ENSTGUG00000009711	RRP12	100	67.759	Taeniopygia_guttata
MGP_CAROLIEiJ_G0022957	Rrp12	99	58.270	ENSTRUG00000012017	rrp12	99	58.346	Takifugu_rubripes
MGP_CAROLIEiJ_G0022957	Rrp12	99	62.243	ENSTNIG00000016522	rrp12	99	62.471	Tetraodon_nigroviridis
MGP_CAROLIEiJ_G0022957	Rrp12	78	89.968	ENSTBEG00000004907	RRP12	80	89.968	Tupaia_belangeri
MGP_CAROLIEiJ_G0022957	Rrp12	99	84.874	ENSTTRG00000009878	RRP12	99	85.027	Tursiops_truncatus
MGP_CAROLIEiJ_G0022957	Rrp12	99	88.406	ENSUAMG00000009092	RRP12	99	88.253	Ursus_americanus
MGP_CAROLIEiJ_G0022957	Rrp12	99	85.802	ENSUMAG00000021621	RRP12	99	85.573	Ursus_maritimus
MGP_CAROLIEiJ_G0022957	Rrp12	99	87.760	ENSVVUG00000023168	RRP12	99	87.991	Vulpes_vulpes
MGP_CAROLIEiJ_G0022957	Rrp12	99	66.947	ENSXETG00000003430	rrp12	99	66.794	Xenopus_tropicalis
MGP_CAROLIEiJ_G0022957	Rrp12	89	64.948	ENSXCOG00000012082	rrp12	97	64.701	Xiphophorus_couchianus
MGP_CAROLIEiJ_G0022957	Rrp12	99	63.182	ENSXMAG00000013498	rrp12	99	62.977	Xiphophorus_maculatus