EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_CAROLIEiJ_G0023020 (Gene tree)
Gene ID: 110285698
Gene Symbol: Npm3
Alias: Nub1
Full Name: nucleophosmin/nucleoplasmin 3
Gene Type: protein_coding
Species: Mus_caroli
Status: putative
Strand: Minus strand
Length: 1854 bases
Position: chr19:42396417-42398270
Accession: 110285698
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CAROLIEiJ_P0048970	Nucleoplasmin	PF03066.15	2e-34	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CAROLIEiJ_T0048970	-	888	XM_021152052	MGP_CAROLIEiJ_P0048970	175 (aa)	XP_021007711	UPI000A3159C4
MGP_CAROLIEiJ_T0048971	-	691	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_CAROLIEiJ_G0023020's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CAROLIEiJ_G0023020's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_CAROLIEiJ_G0023020	Npm3	100	82.022	ENSG00000107833	NPM3	94	83.929	Homo_sapiens
MGP_CAROLIEiJ_G0023020	Npm3	65	50.862	ENSAPOG00000013083	npm3	70	50.435	Acanthochromis_polyacanthus
MGP_CAROLIEiJ_G0023020	Npm3	85	62.500	ENSAMEG00000019414	-	90	64.474	Ailuropoda_melanoleuca
MGP_CAROLIEiJ_G0023020	Npm3	100	84.181	ENSAMEG00000017639	-	100	85.876	Ailuropoda_melanoleuca
MGP_CAROLIEiJ_G0023020	Npm3	61	50.000	ENSACIG00000022586	npm3	85	48.252	Amphilophus_citrinellus
MGP_CAROLIEiJ_G0023020	Npm3	61	51.887	ENSAOCG00000009376	npm3	69	50.000	Amphiprion_ocellaris
MGP_CAROLIEiJ_G0023020	Npm3	61	51.887	ENSAPEG00000015863	npm3	69	50.000	Amphiprion_percula
MGP_CAROLIEiJ_G0023020	Npm3	61	51.887	ENSATEG00000022752	npm3	66	51.402	Anabas_testudineus
MGP_CAROLIEiJ_G0023020	Npm3	57	74.000	ENSAPLG00000010935	NPM3	87	62.687	Anas_platyrhynchos
MGP_CAROLIEiJ_G0023020	Npm3	59	66.019	ENSACAG00000011936	NPM3	62	66.019	Anolis_carolinensis
MGP_CAROLIEiJ_G0023020	Npm3	94	70.833	ENSANAG00000023070	-	96	70.833	Aotus_nancymaae
MGP_CAROLIEiJ_G0023020	Npm3	100	83.708	ENSANAG00000027082	-	94	84.524	Aotus_nancymaae
MGP_CAROLIEiJ_G0023020	Npm3	84	82.993	ENSANAG00000023832	-	64	83.088	Aotus_nancymaae
MGP_CAROLIEiJ_G0023020	Npm3	100	70.056	ENSANAG00000033290	-	94	70.060	Aotus_nancymaae
MGP_CAROLIEiJ_G0023020	Npm3	61	51.887	ENSACLG00000007854	npm3	89	47.917	Astatotilapia_calliptera
MGP_CAROLIEiJ_G0023020	Npm3	61	53.774	ENSAMXG00000039828	npm3	54	54.808	Astyanax_mexicanus
MGP_CAROLIEiJ_G0023020	Npm3	97	84.795	ENSBTAG00000016335	NPM3	97	85.965	Bos_taurus
MGP_CAROLIEiJ_G0023020	Npm3	100	82.584	ENSCJAG00000017650	NPM3	94	83.333	Callithrix_jacchus
MGP_CAROLIEiJ_G0023020	Npm3	94	84.848	ENSCAFG00000009919	NPM3	87	85.714	Canis_familiaris
MGP_CAROLIEiJ_G0023020	Npm3	99	85.714	ENSCAFG00020009185	NPM3	99	85.714	Canis_lupus_dingo
MGP_CAROLIEiJ_G0023020	Npm3	97	84.795	ENSCHIG00000024055	-	91	85.714	Capra_hircus
MGP_CAROLIEiJ_G0023020	Npm3	99	57.803	ENSCHIG00000016052	-	92	57.669	Capra_hircus
MGP_CAROLIEiJ_G0023020	Npm3	94	46.341	ENSCAPG00000016606	NPM3	94	46.667	Cavia_aperea
MGP_CAROLIEiJ_G0023020	Npm3	94	81.818	ENSCPOG00000006301	NPM3	95	81.818	Cavia_porcellus
MGP_CAROLIEiJ_G0023020	Npm3	94	82.143	ENSCCAG00000031043	-	94	83.333	Cebus_capucinus
MGP_CAROLIEiJ_G0023020	Npm3	100	67.978	ENSCCAG00000029457	-	94	69.048	Cebus_capucinus
MGP_CAROLIEiJ_G0023020	Npm3	94	83.929	ENSCATG00000013755	NPM3	94	83.929	Cercocebus_atys
MGP_CAROLIEiJ_G0023020	Npm3	94	83.929	ENSCSAG00000005509	NPM3	94	83.929	Chlorocebus_sabaeus
MGP_CAROLIEiJ_G0023020	Npm3	94	61.212	ENSCPBG00000003817	NPM3	97	60.976	Chrysemys_picta_bellii
MGP_CAROLIEiJ_G0023020	Npm3	100	81.921	ENSCANG00000020300	NPM3	100	84.181	Colobus_angolensis_palliatus
MGP_CAROLIEiJ_G0023020	Npm3	100	92.571	ENSCGRG00001013345	Npm3	100	92.571	Cricetulus_griseus_chok1gshd
MGP_CAROLIEiJ_G0023020	Npm3	78	91.176	ENSCGRG00000015351	Npm3	85	89.855	Cricetulus_griseus_crigri
MGP_CAROLIEiJ_G0023020	Npm3	79	43.919	ENSCSEG00000007944	npm3	94	43.671	Cynoglossus_semilaevis
MGP_CAROLIEiJ_G0023020	Npm3	61	50.459	ENSCVAG00000003305	npm3	67	49.550	Cyprinodon_variegatus
MGP_CAROLIEiJ_G0023020	Npm3	63	50.909	ENSDARG00000103594	npm3	69	50.000	Danio_rerio
MGP_CAROLIEiJ_G0023020	Npm3	100	80.114	ENSDORG00000003491	Npm3	94	81.325	Dipodomys_ordii
MGP_CAROLIEiJ_G0023020	Npm3	99	76.836	ENSETEG00000006307	NPM3	99	78.531	Echinops_telfairi
MGP_CAROLIEiJ_G0023020	Npm3	94	82.036	ENSEASG00005008834	NPM3	100	84.746	Equus_asinus_asinus
MGP_CAROLIEiJ_G0023020	Npm3	94	82.036	ENSECAG00000007524	NPM3	100	84.746	Equus_caballus
MGP_CAROLIEiJ_G0023020	Npm3	64	51.786	ENSELUG00000021730	npm3	85	46.099	Esox_lucius
MGP_CAROLIEiJ_G0023020	Npm3	100	86.364	ENSFCAG00000007178	NPM3	100	86.932	Felis_catus
MGP_CAROLIEiJ_G0023020	Npm3	66	64.348	ENSFALG00000008586	NPM3	72	64.348	Ficedula_albicollis
MGP_CAROLIEiJ_G0023020	Npm3	62	80.556	ENSFDAG00000016537	NPM3	100	80.556	Fukomys_damarensis
MGP_CAROLIEiJ_G0023020	Npm3	70	48.361	ENSFHEG00000003983	npm3	68	50.467	Fundulus_heteroclitus
MGP_CAROLIEiJ_G0023020	Npm3	61	49.057	ENSGMOG00000004317	npm3	74	47.826	Gadus_morhua
MGP_CAROLIEiJ_G0023020	Npm3	60	68.571	ENSGALG00000032329	NPM3	95	59.286	Gallus_gallus
MGP_CAROLIEiJ_G0023020	Npm3	61	51.402	ENSGAFG00000009135	npm3	94	44.079	Gambusia_affinis
MGP_CAROLIEiJ_G0023020	Npm3	61	52.830	ENSGACG00000007294	npm3	62	52.830	Gasterosteus_aculeatus
MGP_CAROLIEiJ_G0023020	Npm3	95	55.814	ENSGAGG00000004081	NPM3	88	59.873	Gopherus_agassizii
MGP_CAROLIEiJ_G0023020	Npm3	100	82.584	ENSGGOG00000027500	NPM3	94	84.524	Gorilla_gorilla
MGP_CAROLIEiJ_G0023020	Npm3	61	50.943	ENSHBUG00000023704	npm3	89	46.479	Haplochromis_burtoni
MGP_CAROLIEiJ_G0023020	Npm3	100	77.714	ENSHGLG00000019118	NPM3	100	77.714	Heterocephalus_glaber_female
MGP_CAROLIEiJ_G0023020	Npm3	77	77.778	ENSHGLG00100010926	NPM3	100	77.778	Heterocephalus_glaber_male
MGP_CAROLIEiJ_G0023020	Npm3	61	47.664	ENSHCOG00000019322	npm3	64	47.222	Hippocampus_comes
MGP_CAROLIEiJ_G0023020	Npm3	63	52.727	ENSIPUG00000008204	npm3	72	51.786	Ictalurus_punctatus
MGP_CAROLIEiJ_G0023020	Npm3	99	82.386	ENSSTOG00000022621	NPM3	94	83.133	Ictidomys_tridecemlineatus
MGP_CAROLIEiJ_G0023020	Npm3	100	82.486	ENSJJAG00000018907	Npm3	100	81.921	Jaculus_jaculus
MGP_CAROLIEiJ_G0023020	Npm3	61	53.774	ENSKMAG00000020800	npm3	66	51.786	Kryptolebias_marmoratus
MGP_CAROLIEiJ_G0023020	Npm3	61	52.830	ENSLBEG00000015651	npm3	86	49.640	Labrus_bergylta
MGP_CAROLIEiJ_G0023020	Npm3	95	44.578	ENSLOCG00000000705	-	98	46.951	Lepisosteus_oculatus
MGP_CAROLIEiJ_G0023020	Npm3	99	79.191	ENSLAFG00000023022	NPM3	95	84.431	Loxodonta_africana
MGP_CAROLIEiJ_G0023020	Npm3	94	83.929	ENSMFAG00000041878	NPM3	94	83.929	Macaca_fascicularis
MGP_CAROLIEiJ_G0023020	Npm3	94	83.333	ENSMMUG00000015774	NPM3	94	83.333	Macaca_mulatta
MGP_CAROLIEiJ_G0023020	Npm3	94	83.929	ENSMNEG00000039999	NPM3	94	83.929	Macaca_nemestrina
MGP_CAROLIEiJ_G0023020	Npm3	94	83.929	ENSMLEG00000038129	NPM3	94	83.929	Mandrillus_leucophaeus
MGP_CAROLIEiJ_G0023020	Npm3	63	50.909	ENSMAMG00000002698	npm3	69	50.000	Mastacembelus_armatus
MGP_CAROLIEiJ_G0023020	Npm3	81	48.252	ENSMZEG00005003091	npm3	89	48.252	Maylandia_zebra
MGP_CAROLIEiJ_G0023020	Npm3	94	93.333	ENSMAUG00000015218	Npm3	94	93.333	Mesocricetus_auratus
MGP_CAROLIEiJ_G0023020	Npm3	100	84.181	ENSMICG00000044119	NPM3	94	84.431	Microcebus_murinus
MGP_CAROLIEiJ_G0023020	Npm3	99	90.805	ENSMOCG00000013601	Npm3	99	90.805	Microtus_ochrogaster
MGP_CAROLIEiJ_G0023020	Npm3	61	51.887	ENSMMOG00000010681	npm3	67	50.926	Mola_mola
MGP_CAROLIEiJ_G0023020	Npm3	98	68.000	ENSMODG00000011689	NPM3	94	70.060	Monodelphis_domestica
MGP_CAROLIEiJ_G0023020	Npm3	67	46.218	ENSMALG00000016787	npm3	70	46.218	Monopterus_albus
MGP_CAROLIEiJ_G0023020	Npm3	100	98.286	ENSMUSG00000056209	Npm3	100	98.286	Mus_musculus
MGP_CAROLIEiJ_G0023020	Npm3	100	97.143	MGP_PahariEiJ_G0014510	Npm3	100	97.143	Mus_pahari
MGP_CAROLIEiJ_G0023020	Npm3	100	98.286	MGP_SPRETEiJ_G0023941	Npm3	100	98.286	Mus_spretus
MGP_CAROLIEiJ_G0023020	Npm3	100	83.616	ENSMPUG00000016894	NPM3	100	85.311	Mustela_putorius_furo
MGP_CAROLIEiJ_G0023020	Npm3	97	80.233	ENSMLUG00000004961	NPM3	92	81.595	Myotis_lucifugus
MGP_CAROLIEiJ_G0023020	Npm3	99	79.310	ENSNGAG00000000155	-	99	77.586	Nannospalax_galili
MGP_CAROLIEiJ_G0023020	Npm3	99	85.143	ENSNGAG00000022833	-	99	85.714	Nannospalax_galili
MGP_CAROLIEiJ_G0023020	Npm3	94	81.548	ENSNLEG00000018637	-	100	82.022	Nomascus_leucogenys
MGP_CAROLIEiJ_G0023020	Npm3	94	83.929	ENSNLEG00000029281	-	94	83.929	Nomascus_leucogenys
MGP_CAROLIEiJ_G0023020	Npm3	78	76.642	ENSMEUG00000003465	-	93	78.295	Notamacropus_eugenii
MGP_CAROLIEiJ_G0023020	Npm3	57	66.667	ENSMEUG00000004931	-	100	66.667	Notamacropus_eugenii
MGP_CAROLIEiJ_G0023020	Npm3	57	70.707	ENSMEUG00000002619	-	100	70.707	Notamacropus_eugenii
MGP_CAROLIEiJ_G0023020	Npm3	93	81.212	ENSOPRG00000009229	NPM3	99	81.818	Ochotona_princeps
MGP_CAROLIEiJ_G0023020	Npm3	97	78.824	ENSODEG00000006704	NPM3	96	78.182	Octodon_degus
MGP_CAROLIEiJ_G0023020	Npm3	79	48.951	ENSONIG00000009513	npm3	88	46.853	Oreochromis_niloticus
MGP_CAROLIEiJ_G0023020	Npm3	94	84.940	ENSOCUG00000016819	NPM3	94	86.145	Oryctolagus_cuniculus
MGP_CAROLIEiJ_G0023020	Npm3	61	51.887	ENSORLG00000008492	npm3	89	48.936	Oryzias_latipes
MGP_CAROLIEiJ_G0023020	Npm3	61	51.887	ENSORLG00020002450	npm3	89	48.936	Oryzias_latipes_hni
MGP_CAROLIEiJ_G0023020	Npm3	79	48.936	ENSORLG00015006856	npm3	89	48.936	Oryzias_latipes_hsok
MGP_CAROLIEiJ_G0023020	Npm3	62	50.459	ENSOMEG00000002666	npm3	74	46.667	Oryzias_melastigma
MGP_CAROLIEiJ_G0023020	Npm3	100	83.616	ENSOGAG00000010001	NPM3	94	83.832	Otolemur_garnettii
MGP_CAROLIEiJ_G0023020	Npm3	97	84.211	ENSOARG00000016916	NPM3	91	85.714	Ovis_aries
MGP_CAROLIEiJ_G0023020	Npm3	100	82.022	ENSPPAG00000040517	NPM3	94	83.929	Pan_paniscus
MGP_CAROLIEiJ_G0023020	Npm3	100	86.364	ENSPPRG00000012611	-	100	86.932	Panthera_pardus
MGP_CAROLIEiJ_G0023020	Npm3	100	86.932	ENSPTIG00000005390	NPM3	100	87.500	Panthera_tigris_altaica
MGP_CAROLIEiJ_G0023020	Npm3	100	82.022	ENSPTRG00000002875	NPM3	94	83.929	Pan_troglodytes
MGP_CAROLIEiJ_G0023020	Npm3	94	83.929	ENSPANG00000021046	NPM3	94	83.929	Papio_anubis
MGP_CAROLIEiJ_G0023020	Npm3	61	41.509	ENSPKIG00000007609	npm3	57	41.509	Paramormyrops_kingsleyae
MGP_CAROLIEiJ_G0023020	Npm3	61	55.140	ENSPMGG00000020204	npm3	70	52.632	Periophthalmus_magnuspinnatus
MGP_CAROLIEiJ_G0023020	Npm3	100	89.773	ENSPEMG00000007731	Npm3	94	90.964	Peromyscus_maniculatus_bairdii
MGP_CAROLIEiJ_G0023020	Npm3	61	52.336	ENSPFOG00000014692	npm3	69	51.786	Poecilia_formosa
MGP_CAROLIEiJ_G0023020	Npm3	61	52.336	ENSPLAG00000009956	npm3	69	51.786	Poecilia_latipinna
MGP_CAROLIEiJ_G0023020	Npm3	58	52.475	ENSPMEG00000011795	npm3	71	51.887	Poecilia_mexicana
MGP_CAROLIEiJ_G0023020	Npm3	61	52.336	ENSPREG00000020765	npm3	69	51.786	Poecilia_reticulata
MGP_CAROLIEiJ_G0023020	Npm3	94	83.529	ENSPPYG00000002589	NPM3	87	83.889	Pongo_abelii
MGP_CAROLIEiJ_G0023020	Npm3	100	83.051	ENSPCOG00000014704	NPM3	94	83.832	Propithecus_coquereli
MGP_CAROLIEiJ_G0023020	Npm3	94	80.838	ENSPVAG00000004038	NPM3	100	83.051	Pteropus_vampyrus
MGP_CAROLIEiJ_G0023020	Npm3	81	48.252	ENSPNYG00000009300	npm3	89	48.252	Pundamilia_nyererei
MGP_CAROLIEiJ_G0023020	Npm3	63	54.054	ENSPNAG00000014779	npm3	87	50.360	Pygocentrus_nattereri
MGP_CAROLIEiJ_G0023020	Npm3	100	93.714	ENSRNOG00000017622	Npm3	100	93.714	Rattus_norvegicus
MGP_CAROLIEiJ_G0023020	Npm3	91	71.605	ENSRBIG00000042048	-	90	79.720	Rhinopithecus_bieti
MGP_CAROLIEiJ_G0023020	Npm3	100	81.921	ENSRBIG00000039086	-	94	84.431	Rhinopithecus_bieti
MGP_CAROLIEiJ_G0023020	Npm3	100	81.921	ENSRROG00000029912	NPM3	94	84.431	Rhinopithecus_roxellana
MGP_CAROLIEiJ_G0023020	Npm3	95	82.941	ENSSBOG00000027661	NPM3	94	83.750	Saimiri_boliviensis_boliviensis
MGP_CAROLIEiJ_G0023020	Npm3	92	66.667	ENSSHAG00000008567	NPM3	94	66.071	Sarcophilus_harrisii
MGP_CAROLIEiJ_G0023020	Npm3	61	49.057	ENSSFOG00015013651	npm3	87	42.446	Scleropages_formosus
MGP_CAROLIEiJ_G0023020	Npm3	61	50.943	ENSSMAG00000003907	npm3	86	46.715	Scophthalmus_maximus
MGP_CAROLIEiJ_G0023020	Npm3	61	54.717	ENSSDUG00000022843	npm3	67	53.704	Seriola_dumerili
MGP_CAROLIEiJ_G0023020	Npm3	61	54.717	ENSSLDG00000002811	npm3	67	53.704	Seriola_lalandi_dorsalis
MGP_CAROLIEiJ_G0023020	Npm3	63	71.930	ENSSPUG00000011875	NPM3	76	68.852	Sphenodon_punctatus
MGP_CAROLIEiJ_G0023020	Npm3	64	50.000	ENSSPAG00000002553	npm3	73	48.305	Stegastes_partitus
MGP_CAROLIEiJ_G0023020	Npm3	99	80.571	ENSSSCG00000010568	NPM3	94	83.030	Sus_scrofa
MGP_CAROLIEiJ_G0023020	Npm3	63	67.273	ENSTGUG00000009948	NPM3	83	67.273	Taeniopygia_guttata
MGP_CAROLIEiJ_G0023020	Npm3	83	46.575	ENSTRUG00000011661	npm3	74	50.427	Takifugu_rubripes
MGP_CAROLIEiJ_G0023020	Npm3	67	49.573	ENSTNIG00000016518	npm3	67	49.573	Tetraodon_nigroviridis
MGP_CAROLIEiJ_G0023020	Npm3	94	84.431	ENSUAMG00000024072	NPM3	73	86.441	Ursus_americanus
MGP_CAROLIEiJ_G0023020	Npm3	94	84.431	ENSUMAG00000023016	NPM3	73	86.441	Ursus_maritimus
MGP_CAROLIEiJ_G0023020	Npm3	100	85.795	ENSVPAG00000003120	NPM3	100	88.068	Vicugna_pacos
MGP_CAROLIEiJ_G0023020	Npm3	94	84.848	ENSVVUG00000000945	NPM3	87	85.714	Vulpes_vulpes
MGP_CAROLIEiJ_G0023020	Npm3	67	56.780	ENSXETG00000014472	npm3	68	56.780	Xenopus_tropicalis
MGP_CAROLIEiJ_G0023020	Npm3	64	51.786	ENSXCOG00000012121	npm3	67	51.786	Xiphophorus_couchianus
MGP_CAROLIEiJ_G0023020	Npm3	64	51.786	ENSXMAG00000013473	npm3	67	51.786	Xiphophorus_maculatus