EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_CAROLIEiJ_G0023026 (Gene tree)
Gene ID: 110285799
Gene Symbol: Pprc1
Alias: -
Full Name: peroxisome proliferator-activated receptor gamma%2C coactivator-related 1
Gene Type: protein_coding
Species: Mus_caroli
Status: putative
Strand: Plus strand
Length: 32070 bases
Position: chr19:42693525-42725594
Accession: 110285799
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CAROLIEiJ_P0048996	RRM_1	PF00076.22	6.7e-08	1	1
MGP_CAROLIEiJ_P0048994	RRM_1	PF00076.22	6.8e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CAROLIEiJ_T0049004	-	688	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0049001	-	307	-	MGP_CAROLIEiJ_P0049001	43 (aa)	-	-
MGP_CAROLIEiJ_T0049000	-	563	-	MGP_CAROLIEiJ_P0049000	120 (aa)	-	-
MGP_CAROLIEiJ_T0049003	-	322	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0049002	-	3738	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0048998	-	386	-	MGP_CAROLIEiJ_P0048998	93 (aa)	-	UPI00015AA176
MGP_CAROLIEiJ_T0048999	-	543	-	MGP_CAROLIEiJ_P0048999	145 (aa)	-	-
MGP_CAROLIEiJ_T0048993	-	405	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0048994	-	5235	XM_021152217	MGP_CAROLIEiJ_P0048994	1639 (aa)	XP_021007876	UPI000A315106
MGP_CAROLIEiJ_T0048995	-	3944	-	MGP_CAROLIEiJ_P0048995	1199 (aa)	-	-
MGP_CAROLIEiJ_T0048996	-	5194	-	MGP_CAROLIEiJ_P0048996	1641 (aa)	-	-
MGP_CAROLIEiJ_T0048997	-	389	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_CAROLIEiJ_G0023026's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CAROLIEiJ_G0023026's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_CAROLIEiJ_G0023026	Pprc1	81	99.291	ENSG00000148840	PPRC1	96	98.592	Homo_sapiens
MGP_CAROLIEiJ_G0023026	Pprc1	100	73.015	ENSAMEG00000017685	PPRC1	100	73.672	Ailuropoda_melanoleuca
MGP_CAROLIEiJ_G0023026	Pprc1	81	99.291	ENSANAG00000029448	PPRC1	96	98.592	Aotus_nancymaae
MGP_CAROLIEiJ_G0023026	Pprc1	81	99.291	ENSBTAG00000007427	PPRC1	96	98.592	Bos_taurus
MGP_CAROLIEiJ_G0023026	Pprc1	81	99.291	ENSCJAG00000017812	PPRC1	96	98.592	Callithrix_jacchus
MGP_CAROLIEiJ_G0023026	Pprc1	100	72.365	ENSCAFG00000010040	PPRC1	85	70.321	Canis_familiaris
MGP_CAROLIEiJ_G0023026	Pprc1	79	97.917	ENSCAFG00020010030	PPRC1	99	98.592	Canis_lupus_dingo
MGP_CAROLIEiJ_G0023026	Pprc1	81	99.291	ENSCHIG00000011471	PPRC1	96	98.592	Capra_hircus
MGP_CAROLIEiJ_G0023026	Pprc1	81	97.973	ENSCPOG00000032149	PPRC1	96	99.296	Cavia_porcellus
MGP_CAROLIEiJ_G0023026	Pprc1	81	99.291	ENSCCAG00000014910	PPRC1	96	98.592	Cebus_capucinus
MGP_CAROLIEiJ_G0023026	Pprc1	81	99.291	ENSCATG00000029634	PPRC1	96	98.592	Cercocebus_atys
MGP_CAROLIEiJ_G0023026	Pprc1	81	99.296	ENSCLAG00000001364	PPRC1	96	99.296	Chinchilla_lanigera
MGP_CAROLIEiJ_G0023026	Pprc1	100	72.754	ENSCSAG00000005471	PPRC1	100	73.587	Chlorocebus_sabaeus
MGP_CAROLIEiJ_G0023026	Pprc1	75	69.651	ENSCHOG00000006574	PPRC1	99	69.493	Choloepus_hoffmanni
MGP_CAROLIEiJ_G0023026	Pprc1	81	99.291	ENSCANG00000037336	PPRC1	96	98.592	Colobus_angolensis_palliatus
MGP_CAROLIEiJ_G0023026	Pprc1	100	81.592	ENSCGRG00001011726	Pprc1	94	98.592	Cricetulus_griseus_chok1gshd
MGP_CAROLIEiJ_G0023026	Pprc1	95	82.428	ENSCGRG00000012760	Pprc1	100	80.064	Cricetulus_griseus_crigri
MGP_CAROLIEiJ_G0023026	Pprc1	100	71.623	ENSDNOG00000040730	PPRC1	100	71.682	Dasypus_novemcinctus
MGP_CAROLIEiJ_G0023026	Pprc1	100	73.482	ENSDORG00000001046	Pprc1	85	71.408	Dipodomys_ordii
MGP_CAROLIEiJ_G0023026	Pprc1	92	79.167	ENSETEG00000019254	PPRC1	82	96.479	Echinops_telfairi
MGP_CAROLIEiJ_G0023026	Pprc1	100	72.765	ENSEASG00005007583	PPRC1	85	70.621	Equus_asinus_asinus
MGP_CAROLIEiJ_G0023026	Pprc1	81	99.291	ENSECAG00000009482	PPRC1	96	98.592	Equus_caballus
MGP_CAROLIEiJ_G0023026	Pprc1	73	76.870	ENSEEUG00000014216	PPRC1	73	78.393	Erinaceus_europaeus
MGP_CAROLIEiJ_G0023026	Pprc1	81	99.291	ENSFCAG00000001238	PPRC1	96	98.592	Felis_catus
MGP_CAROLIEiJ_G0023026	Pprc1	95	72.159	ENSFDAG00000011496	PPRC1	100	72.222	Fukomys_damarensis
MGP_CAROLIEiJ_G0023026	Pprc1	81	99.291	ENSGGOG00000002155	PPRC1	96	98.592	Gorilla_gorilla
MGP_CAROLIEiJ_G0023026	Pprc1	100	72.385	ENSLAFG00000014232	PPRC1	100	72.265	Loxodonta_africana
MGP_CAROLIEiJ_G0023026	Pprc1	81	99.291	ENSMFAG00000038589	PPRC1	96	98.592	Macaca_fascicularis
MGP_CAROLIEiJ_G0023026	Pprc1	81	99.291	ENSMMUG00000001186	PPRC1	96	98.592	Macaca_mulatta
MGP_CAROLIEiJ_G0023026	Pprc1	81	99.291	ENSMNEG00000031603	PPRC1	96	98.592	Macaca_nemestrina
MGP_CAROLIEiJ_G0023026	Pprc1	81	99.291	ENSMLEG00000035092	PPRC1	96	98.592	Mandrillus_leucophaeus
MGP_CAROLIEiJ_G0023026	Pprc1	85	80.701	ENSMAUG00000016674	Pprc1	100	79.661	Mesocricetus_auratus
MGP_CAROLIEiJ_G0023026	Pprc1	81	99.291	ENSMICG00000011794	PPRC1	96	98.592	Microcebus_murinus
MGP_CAROLIEiJ_G0023026	Pprc1	100	93.026	ENSMUSG00000055491	Pprc1	100	92.662	Mus_musculus
MGP_CAROLIEiJ_G0023026	Pprc1	100	90.459	MGP_PahariEiJ_G0014516	Pprc1	100	90.821	Mus_pahari
MGP_CAROLIEiJ_G0023026	Pprc1	100	94.411	MGP_SPRETEiJ_G0023947	Pprc1	100	93.864	Mus_spretus
MGP_CAROLIEiJ_G0023026	Pprc1	81	99.291	ENSMPUG00000016888	PPRC1	96	98.592	Mustela_putorius_furo
MGP_CAROLIEiJ_G0023026	Pprc1	100	70.968	ENSMLUG00000006217	PPRC1	100	70.781	Myotis_lucifugus
MGP_CAROLIEiJ_G0023026	Pprc1	100	79.479	ENSNGAG00000016516	Pprc1	100	79.021	Nannospalax_galili
MGP_CAROLIEiJ_G0023026	Pprc1	100	71.165	ENSNLEG00000014996	PPRC1	99	81.690	Nomascus_leucogenys
MGP_CAROLIEiJ_G0023026	Pprc1	50	91.200	ENSMEUG00000013795	-	52	91.200	Notamacropus_eugenii
MGP_CAROLIEiJ_G0023026	Pprc1	91	79.870	ENSOPRG00000009346	PPRC1	91	79.870	Ochotona_princeps
MGP_CAROLIEiJ_G0023026	Pprc1	100	71.650	ENSOCUG00000000510	PPRC1	100	72.722	Oryctolagus_cuniculus
MGP_CAROLIEiJ_G0023026	Pprc1	100	72.033	ENSOGAG00000016354	PPRC1	100	72.689	Otolemur_garnettii
MGP_CAROLIEiJ_G0023026	Pprc1	97	70.726	ENSOARG00000017509	PPRC1	82	71.473	Ovis_aries
MGP_CAROLIEiJ_G0023026	Pprc1	100	70.910	ENSPPAG00000032544	PPRC1	100	72.159	Pan_paniscus
MGP_CAROLIEiJ_G0023026	Pprc1	81	99.291	ENSPPRG00000004274	PPRC1	96	98.592	Panthera_pardus
MGP_CAROLIEiJ_G0023026	Pprc1	81	99.291	ENSPTIG00000013709	PPRC1	96	98.592	Panthera_tigris_altaica
MGP_CAROLIEiJ_G0023026	Pprc1	81	99.291	ENSPTRG00000002883	PPRC1	96	98.592	Pan_troglodytes
MGP_CAROLIEiJ_G0023026	Pprc1	81	99.291	ENSPANG00000021042	PPRC1	96	98.592	Papio_anubis
MGP_CAROLIEiJ_G0023026	Pprc1	82	74.079	ENSPCAG00000008277	PPRC1	95	70.728	Procavia_capensis
MGP_CAROLIEiJ_G0023026	Pprc1	81	98.582	ENSPCOG00000025917	PPRC1	96	97.887	Propithecus_coquereli
MGP_CAROLIEiJ_G0023026	Pprc1	79	67.299	ENSPVAG00000004048	PPRC1	86	63.827	Pteropus_vampyrus
MGP_CAROLIEiJ_G0023026	Pprc1	100	86.297	ENSRNOG00000018561	Pprc1	100	86.175	Rattus_norvegicus
MGP_CAROLIEiJ_G0023026	Pprc1	81	99.291	ENSRBIG00000027711	PPRC1	96	98.592	Rhinopithecus_bieti
MGP_CAROLIEiJ_G0023026	Pprc1	81	99.291	ENSRROG00000044599	PPRC1	96	98.592	Rhinopithecus_roxellana
MGP_CAROLIEiJ_G0023026	Pprc1	92	77.562	ENSSARG00000004030	PPRC1	95	74.827	Sorex_araneus
MGP_CAROLIEiJ_G0023026	Pprc1	100	71.386	ENSSSCG00000010575	PPRC1	100	71.147	Sus_scrofa
MGP_CAROLIEiJ_G0023026	Pprc1	100	72.126	ENSTTRG00000014966	PPRC1	100	72.305	Tursiops_truncatus
MGP_CAROLIEiJ_G0023026	Pprc1	76	99.291	ENSUAMG00000028058	PPRC1	96	98.592	Ursus_americanus
MGP_CAROLIEiJ_G0023026	Pprc1	79	99.291	ENSUMAG00000023041	PPRC1	96	98.592	Ursus_maritimus
MGP_CAROLIEiJ_G0023026	Pprc1	81	99.291	ENSVVUG00000002566	PPRC1	96	98.592	Vulpes_vulpes