EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_CAROLIEiJ_G0023027 (Gene tree)
Gene ID: 110285745
Gene Symbol: Nolc1
Alias: 3230402K17Rik|NOPP140|P130
Full Name: nucleolar and coiled-body phosphoprotein 1
Gene Type: protein_coding
Species: Mus_caroli
Status: putative
Strand: Plus strand
Length: 9026 bases
Position: chr19:42728534-42737559
Accession: 110285745
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CAROLIEiJ_P0049005	SRP40_C	PF05022.12	6e-28	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CAROLIEiJ_T0049005	-	3646	XM_021152130	MGP_CAROLIEiJ_P0049005	711 (aa)	XP_021007789	UPI000A3181FF

Gene Model

Click here to download MGP_CAROLIEiJ_G0023027's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CAROLIEiJ_G0023027's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_CAROLIEiJ_G0023027	Nolc1	100	67.906	ENSG00000166197	NOLC1	93	83.721	Homo_sapiens
MGP_CAROLIEiJ_G0023027	Nolc1	100	66.437	ENSBTAG00000007435	NOLC1	64	65.466	Bos_taurus
MGP_CAROLIEiJ_G0023027	Nolc1	100	59.459	ENSCHIG00000016755	NOLC1	65	57.026	Capra_hircus
MGP_CAROLIEiJ_G0023027	Nolc1	94	68.023	ENSTSYG00000011322	NOLC1	58	63.184	Carlito_syrichta
MGP_CAROLIEiJ_G0023027	Nolc1	100	68.837	ENSCCAG00000031293	NOLC1	67	66.392	Cebus_capucinus
MGP_CAROLIEiJ_G0023027	Nolc1	100	68.094	ENSCATG00000020949	NOLC1	61	64.692	Cercocebus_atys
MGP_CAROLIEiJ_G0023027	Nolc1	100	73.389	ENSCGRG00001009806	Nolc1	67	69.610	Cricetulus_griseus_chok1gshd
MGP_CAROLIEiJ_G0023027	Nolc1	100	73.389	ENSCGRG00000005530	Nolc1	67	69.610	Cricetulus_griseus_crigri
MGP_CAROLIEiJ_G0023027	Nolc1	100	91.803	ENSDNOG00000025256	NOLC1	57	91.803	Dasypus_novemcinctus
MGP_CAROLIEiJ_G0023027	Nolc1	100	70.293	ENSDORG00000001056	Nolc1	100	66.899	Dipodomys_ordii
MGP_CAROLIEiJ_G0023027	Nolc1	100	72.276	ENSEASG00005007519	NOLC1	100	71.310	Equus_asinus_asinus
MGP_CAROLIEiJ_G0023027	Nolc1	100	70.621	ENSECAG00000024700	NOLC1	100	71.310	Equus_caballus
MGP_CAROLIEiJ_G0023027	Nolc1	100	65.465	ENSFDAG00000006050	NOLC1	65	66.738	Fukomys_damarensis
MGP_CAROLIEiJ_G0023027	Nolc1	100	69.241	ENSSTOG00000002168	NOLC1	100	65.881	Ictidomys_tridecemlineatus
MGP_CAROLIEiJ_G0023027	Nolc1	79	75.658	ENSMNEG00000033199	NOLC1	51	85.443	Macaca_nemestrina
MGP_CAROLIEiJ_G0023027	Nolc1	100	67.439	ENSMLEG00000040773	NOLC1	60	61.276	Mandrillus_leucophaeus
MGP_CAROLIEiJ_G0023027	Nolc1	100	74.825	ENSMOCG00000015232	Nolc1	100	73.669	Microtus_ochrogaster
MGP_CAROLIEiJ_G0023027	Nolc1	100	88.440	ENSMUSG00000015176	Nolc1	100	89.013	Mus_musculus
MGP_CAROLIEiJ_G0023027	Nolc1	100	84.572	MGP_PahariEiJ_G0014517	Nolc1	100	83.731	Mus_pahari
MGP_CAROLIEiJ_G0023027	Nolc1	100	87.604	MGP_SPRETEiJ_G0023948	Nolc1	100	88.039	Mus_spretus
MGP_CAROLIEiJ_G0023027	Nolc1	100	70.523	ENSMPUG00000016887	NOLC1	67	68.980	Mustela_putorius_furo
MGP_CAROLIEiJ_G0023027	Nolc1	100	71.742	ENSMLUG00000001726	NOLC1	65	70.825	Myotis_lucifugus
MGP_CAROLIEiJ_G0023027	Nolc1	92	71.429	ENSOPRG00000009381	NOLC1	80	75.155	Ochotona_princeps
MGP_CAROLIEiJ_G0023027	Nolc1	100	71.448	ENSOCUG00000000516	-	64	69.032	Oryctolagus_cuniculus
MGP_CAROLIEiJ_G0023027	Nolc1	100	66.850	ENSOARG00000017556	NOLC1	67	63.544	Ovis_aries
MGP_CAROLIEiJ_G0023027	Nolc1	100	67.818	ENSPANG00000021014	NOLC1	60	61.276	Papio_anubis
MGP_CAROLIEiJ_G0023027	Nolc1	100	67.541	ENSPPYG00000002595	NOLC1	58	64.465	Pongo_abelii
MGP_CAROLIEiJ_G0023027	Nolc1	100	69.241	ENSPCOG00000019070	-	64	65.890	Propithecus_coquereli
MGP_CAROLIEiJ_G0023027	Nolc1	100	66.849	ENSPVAG00000004050	NOLC1	65	68.776	Pteropus_vampyrus
MGP_CAROLIEiJ_G0023027	Nolc1	100	81.919	ENSRNOG00000018704	Nolc1	100	79.555	Rattus_norvegicus
MGP_CAROLIEiJ_G0023027	Nolc1	100	62.368	ENSRBIG00000032216	NOLC1	62	62.316	Rhinopithecus_bieti
MGP_CAROLIEiJ_G0023027	Nolc1	100	68.000	ENSRROG00000038056	NOLC1	62	62.316	Rhinopithecus_roxellana
MGP_CAROLIEiJ_G0023027	Nolc1	100	67.305	ENSSARG00000004111	NOLC1	64	65.672	Sorex_araneus
MGP_CAROLIEiJ_G0023027	Nolc1	100	69.972	ENSSSCG00000010576	NOLC1	64	69.787	Sus_scrofa
MGP_CAROLIEiJ_G0023027	Nolc1	100	71.607	ENSUAMG00000028059	NOLC1	65	72.163	Ursus_americanus
MGP_CAROLIEiJ_G0023027	Nolc1	100	71.468	ENSUMAG00000023063	NOLC1	65	71.520	Ursus_maritimus
MGP_CAROLIEiJ_G0023027	Nolc1	100	67.500	ENSVVUG00000002661	NOLC1	64	64.103	Vulpes_vulpes