EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_CAROLIEiJ_G0023050 (Gene tree)
Gene ID: 110285374
Gene Symbol: Pdcd11
Alias: 1110021I22Rik|ALG-4
Full Name: programmed cell death 11
Gene Type: protein_coding
Species: Mus_caroli
Status: putative
Strand: Plus strand
Length: 41506 bases
Position: chr19:43768673-43810178
Accession: 110285374
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CAROLIEiJ_P0049066	Suf	PF05843.14	5.5e-09	1	1
MGP_CAROLIEiJ_P0049066	S1	PF00575.23	5.9e-63	1	4
MGP_CAROLIEiJ_P0049066	S1	PF00575.23	5.9e-63	2	4
MGP_CAROLIEiJ_P0049066	S1	PF00575.23	5.9e-63	3	4
MGP_CAROLIEiJ_P0049066	S1	PF00575.23	5.9e-63	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CAROLIEiJ_T0049066	-	6031	XM_021151475	MGP_CAROLIEiJ_P0049066	1855 (aa)	XP_021007134	UPI000A315920

Gene Model

Click here to download MGP_CAROLIEiJ_G0023050's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CAROLIEiJ_G0023050's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_CAROLIEiJ_G0023050	Pdcd11	100	80.160	ENSG00000148843	PDCD11	92	88.571	Homo_sapiens
MGP_CAROLIEiJ_G0023050	Pdcd11	99	43.917	ENSAPOG00000015629	pdcd11	99	43.850	Acanthochromis_polyacanthus
MGP_CAROLIEiJ_G0023050	Pdcd11	99	78.166	ENSAMEG00000017935	PDCD11	99	78.325	Ailuropoda_melanoleuca
MGP_CAROLIEiJ_G0023050	Pdcd11	99	43.927	ENSAOCG00000015287	pdcd11	99	43.710	Amphiprion_ocellaris
MGP_CAROLIEiJ_G0023050	Pdcd11	53	43.257	ENSAPEG00000020240	pdcd11	96	43.287	Amphiprion_percula
MGP_CAROLIEiJ_G0023050	Pdcd11	99	43.415	ENSATEG00000021043	pdcd11	99	43.820	Anabas_testudineus
MGP_CAROLIEiJ_G0023050	Pdcd11	99	54.337	ENSAPLG00000010301	PDCD11	99	54.816	Anas_platyrhynchos
MGP_CAROLIEiJ_G0023050	Pdcd11	99	54.301	ENSACAG00000004796	PDCD11	99	54.086	Anolis_carolinensis
MGP_CAROLIEiJ_G0023050	Pdcd11	99	79.733	ENSANAG00000034576	PDCD11	99	79.200	Aotus_nancymaae
MGP_CAROLIEiJ_G0023050	Pdcd11	91	64.430	ENSACLG00000018236	pdcd11	98	59.829	Astatotilapia_calliptera
MGP_CAROLIEiJ_G0023050	Pdcd11	99	40.681	ENSAMXG00000005458	pdcd11	100	40.681	Astyanax_mexicanus
MGP_CAROLIEiJ_G0023050	Pdcd11	100	76.112	ENSBTAG00000009715	PDCD11	100	75.663	Bos_taurus
MGP_CAROLIEiJ_G0023050	Pdcd11	99	78.827	ENSCJAG00000018257	PDCD11	99	79.040	Callithrix_jacchus
MGP_CAROLIEiJ_G0023050	Pdcd11	99	77.908	ENSCAFG00000010411	PDCD11	100	78.044	Canis_familiaris
MGP_CAROLIEiJ_G0023050	Pdcd11	99	79.117	ENSCAFG00020010369	PDCD11	100	79.064	Canis_lupus_dingo
MGP_CAROLIEiJ_G0023050	Pdcd11	99	76.047	ENSCHIG00000025218	PDCD11	100	75.756	Capra_hircus
MGP_CAROLIEiJ_G0023050	Pdcd11	98	72.618	ENSTSYG00000033423	PDCD11	99	72.453	Carlito_syrichta
MGP_CAROLIEiJ_G0023050	Pdcd11	91	68.350	ENSCAPG00000005386	PDCD11	99	68.350	Cavia_aperea
MGP_CAROLIEiJ_G0023050	Pdcd11	100	76.530	ENSCPOG00000010957	PDCD11	99	77.790	Cavia_porcellus
MGP_CAROLIEiJ_G0023050	Pdcd11	99	79.467	ENSCCAG00000018950	PDCD11	99	79.413	Cebus_capucinus
MGP_CAROLIEiJ_G0023050	Pdcd11	100	80.499	ENSCATG00000044331	PDCD11	100	80.446	Cercocebus_atys
MGP_CAROLIEiJ_G0023050	Pdcd11	100	77.576	ENSCLAG00000001029	PDCD11	100	77.380	Chinchilla_lanigera
MGP_CAROLIEiJ_G0023050	Pdcd11	100	80.426	ENSCSAG00000005346	PDCD11	100	80.372	Chlorocebus_sabaeus
MGP_CAROLIEiJ_G0023050	Pdcd11	84	96.124	ENSCHOG00000004796	PDCD11	88	96.124	Choloepus_hoffmanni
MGP_CAROLIEiJ_G0023050	Pdcd11	91	73.143	ENSCPBG00000024487	PDCD11	99	74.644	Chrysemys_picta_bellii
MGP_CAROLIEiJ_G0023050	Pdcd11	96	35.784	ENSCING00000002715	-	92	33.704	Ciona_intestinalis
MGP_CAROLIEiJ_G0023050	Pdcd11	100	79.894	ENSCANG00000043300	PDCD11	100	80.106	Colobus_angolensis_palliatus
MGP_CAROLIEiJ_G0023050	Pdcd11	100	85.730	ENSCGRG00001006458	Pdcd11	100	85.730	Cricetulus_griseus_chok1gshd
MGP_CAROLIEiJ_G0023050	Pdcd11	100	85.524	ENSCGRG00000003583	Pdcd11	100	85.524	Cricetulus_griseus_crigri
MGP_CAROLIEiJ_G0023050	Pdcd11	97	43.524	ENSCSEG00000010739	pdcd11	99	43.397	Cynoglossus_semilaevis
MGP_CAROLIEiJ_G0023050	Pdcd11	89	61.905	ENSCVAG00000018903	pdcd11	99	47.302	Cyprinodon_variegatus
MGP_CAROLIEiJ_G0023050	Pdcd11	99	42.293	ENSDARG00000052480	pdcd11	99	42.158	Danio_rerio
MGP_CAROLIEiJ_G0023050	Pdcd11	100	76.776	ENSDNOG00000013838	PDCD11	100	76.882	Dasypus_novemcinctus
MGP_CAROLIEiJ_G0023050	Pdcd11	100	79.957	ENSDORG00000010420	Pdcd11	100	80.064	Dipodomys_ordii
MGP_CAROLIEiJ_G0023050	Pdcd11	60	40.125	FBgn0039182	CG5728	74	40.636	Drosophila_melanogaster
MGP_CAROLIEiJ_G0023050	Pdcd11	95	66.742	ENSETEG00000000813	PDCD11	100	66.236	Echinops_telfairi
MGP_CAROLIEiJ_G0023050	Pdcd11	72	52.740	ENSEBUG00000002358	-	89	52.941	Eptatretus_burgeri
MGP_CAROLIEiJ_G0023050	Pdcd11	96	79.500	ENSEASG00005015159	PDCD11	100	79.444	Equus_asinus_asinus
MGP_CAROLIEiJ_G0023050	Pdcd11	100	79.087	ENSECAG00000020507	PDCD11	100	78.715	Equus_caballus
MGP_CAROLIEiJ_G0023050	Pdcd11	98	82.000	ENSEEUG00000009245	PDCD11	91	82.000	Erinaceus_europaeus
MGP_CAROLIEiJ_G0023050	Pdcd11	99	44.409	ENSELUG00000004211	pdcd11	99	44.231	Esox_lucius
MGP_CAROLIEiJ_G0023050	Pdcd11	99	78.386	ENSFCAG00000002384	PDCD11	99	78.439	Felis_catus
MGP_CAROLIEiJ_G0023050	Pdcd11	99	55.282	ENSFALG00000008775	PDCD11	99	55.013	Ficedula_albicollis
MGP_CAROLIEiJ_G0023050	Pdcd11	100	76.845	ENSFDAG00000009532	PDCD11	100	76.580	Fukomys_damarensis
MGP_CAROLIEiJ_G0023050	Pdcd11	94	66.216	ENSFHEG00000022997	pdcd11	99	66.901	Fundulus_heteroclitus
MGP_CAROLIEiJ_G0023050	Pdcd11	92	44.238	ENSGMOG00000004186	pdcd11	94	44.114	Gadus_morhua
MGP_CAROLIEiJ_G0023050	Pdcd11	76	53.614	ENSGALG00000008265	PDCD11	99	52.973	Gallus_gallus
MGP_CAROLIEiJ_G0023050	Pdcd11	93	49.171	ENSGAFG00000012806	pdcd11	99	49.543	Gambusia_affinis
MGP_CAROLIEiJ_G0023050	Pdcd11	99	43.205	ENSGACG00000018233	pdcd11	97	59.055	Gasterosteus_aculeatus
MGP_CAROLIEiJ_G0023050	Pdcd11	95	58.810	ENSGAGG00000024314	PDCD11	99	58.966	Gopherus_agassizii
MGP_CAROLIEiJ_G0023050	Pdcd11	100	79.947	ENSGGOG00000011621	PDCD11	100	79.894	Gorilla_gorilla
MGP_CAROLIEiJ_G0023050	Pdcd11	99	43.677	ENSHBUG00000020226	pdcd11	99	44.159	Haplochromis_burtoni
MGP_CAROLIEiJ_G0023050	Pdcd11	100	76.674	ENSHGLG00000001462	PDCD11	100	76.780	Heterocephalus_glaber_female
MGP_CAROLIEiJ_G0023050	Pdcd11	100	75.983	ENSHGLG00100018779	PDCD11	100	76.089	Heterocephalus_glaber_male
MGP_CAROLIEiJ_G0023050	Pdcd11	99	42.575	ENSHCOG00000016006	pdcd11	99	42.410	Hippocampus_comes
MGP_CAROLIEiJ_G0023050	Pdcd11	63	39.812	ENSIPUG00000015102	pdcd11	99	41.801	Ictalurus_punctatus
MGP_CAROLIEiJ_G0023050	Pdcd11	100	80.278	ENSSTOG00000014553	PDCD11	100	80.118	Ictidomys_tridecemlineatus
MGP_CAROLIEiJ_G0023050	Pdcd11	100	80.600	ENSJJAG00000015523	Pdcd11	100	80.815	Jaculus_jaculus
MGP_CAROLIEiJ_G0023050	Pdcd11	99	48.448	ENSLOCG00000011818	pdcd11	99	48.132	Lepisosteus_oculatus
MGP_CAROLIEiJ_G0023050	Pdcd11	100	77.461	ENSLAFG00000008398	PDCD11	100	77.043	Loxodonta_africana
MGP_CAROLIEiJ_G0023050	Pdcd11	100	80.319	ENSMFAG00000044058	PDCD11	100	80.532	Macaca_fascicularis
MGP_CAROLIEiJ_G0023050	Pdcd11	100	80.266	ENSMMUG00000007058	PDCD11	100	80.479	Macaca_mulatta
MGP_CAROLIEiJ_G0023050	Pdcd11	100	80.319	ENSMNEG00000040726	PDCD11	99	80.585	Macaca_nemestrina
MGP_CAROLIEiJ_G0023050	Pdcd11	100	80.215	ENSMLEG00000040978	PDCD11	100	80.161	Mandrillus_leucophaeus
MGP_CAROLIEiJ_G0023050	Pdcd11	99	43.462	ENSMAMG00000009572	pdcd11	99	43.132	Mastacembelus_armatus
MGP_CAROLIEiJ_G0023050	Pdcd11	99	43.518	ENSMZEG00005008949	pdcd11	99	43.944	Maylandia_zebra
MGP_CAROLIEiJ_G0023050	Pdcd11	99	54.929	ENSMGAG00000010482	PDCD11	99	54.915	Meleagris_gallopavo
MGP_CAROLIEiJ_G0023050	Pdcd11	89	87.419	ENSMAUG00000014924	Pdcd11	97	87.310	Mesocricetus_auratus
MGP_CAROLIEiJ_G0023050	Pdcd11	100	79.434	ENSMICG00000012421	PDCD11	100	79.380	Microcebus_murinus
MGP_CAROLIEiJ_G0023050	Pdcd11	100	84.121	ENSMOCG00000021792	Pdcd11	100	84.121	Microtus_ochrogaster
MGP_CAROLIEiJ_G0023050	Pdcd11	99	40.106	ENSMMOG00000007572	pdcd11	97	43.689	Mola_mola
MGP_CAROLIEiJ_G0023050	Pdcd11	99	59.884	ENSMODG00000011077	PDCD11	99	60.063	Monodelphis_domestica
MGP_CAROLIEiJ_G0023050	Pdcd11	99	46.957	ENSMALG00000003859	pdcd11	98	42.796	Monopterus_albus
MGP_CAROLIEiJ_G0023050	Pdcd11	100	97.046	ENSMUSG00000025047	Pdcd11	100	97.046	Mus_musculus
MGP_CAROLIEiJ_G0023050	Pdcd11	100	94.118	MGP_PahariEiJ_G0014540	Pdcd11	100	94.599	Mus_pahari
MGP_CAROLIEiJ_G0023050	Pdcd11	100	97.312	MGP_SPRETEiJ_G0023971	Pdcd11	100	97.312	Mus_spretus
MGP_CAROLIEiJ_G0023050	Pdcd11	99	77.512	ENSMPUG00000016829	PDCD11	100	77.990	Mustela_putorius_furo
MGP_CAROLIEiJ_G0023050	Pdcd11	100	79.279	ENSMLUG00000004997	PDCD11	100	79.301	Myotis_lucifugus
MGP_CAROLIEiJ_G0023050	Pdcd11	100	82.128	ENSNGAG00000018143	Pdcd11	100	82.500	Nannospalax_galili
MGP_CAROLIEiJ_G0023050	Pdcd11	86	57.567	ENSNBRG00000021596	pdcd11	99	55.899	Neolamprologus_brichardi
MGP_CAROLIEiJ_G0023050	Pdcd11	100	76.911	ENSNLEG00000026700	PDCD11	100	77.340	Nomascus_leucogenys
MGP_CAROLIEiJ_G0023050	Pdcd11	70	79.039	ENSMEUG00000013719	-	71	79.039	Notamacropus_eugenii
MGP_CAROLIEiJ_G0023050	Pdcd11	100	74.110	ENSOPRG00000010593	PDCD11	100	74.056	Ochotona_princeps
MGP_CAROLIEiJ_G0023050	Pdcd11	100	75.769	ENSODEG00000008079	PDCD11	99	75.822	Octodon_degus
MGP_CAROLIEiJ_G0023050	Pdcd11	99	44.248	ENSONIG00000018835	pdcd11	99	44.212	Oreochromis_niloticus
MGP_CAROLIEiJ_G0023050	Pdcd11	99	58.789	ENSOANG00000001636	-	99	58.776	Ornithorhynchus_anatinus
MGP_CAROLIEiJ_G0023050	Pdcd11	100	78.780	ENSOCUG00000006312	PDCD11	100	78.674	Oryctolagus_cuniculus
MGP_CAROLIEiJ_G0023050	Pdcd11	99	43.337	ENSORLG00020003642	pdcd11	99	43.117	Oryzias_latipes_hni
MGP_CAROLIEiJ_G0023050	Pdcd11	99	43.262	ENSORLG00015001618	pdcd11	99	43.125	Oryzias_latipes_hsok
MGP_CAROLIEiJ_G0023050	Pdcd11	68	43.525	ENSOMEG00000010904	pdcd11	98	43.407	Oryzias_melastigma
MGP_CAROLIEiJ_G0023050	Pdcd11	100	77.884	ENSOGAG00000008683	PDCD11	100	77.618	Otolemur_garnettii
MGP_CAROLIEiJ_G0023050	Pdcd11	99	76.127	ENSOARG00000003719	PDCD11	100	75.597	Ovis_aries
MGP_CAROLIEiJ_G0023050	Pdcd11	100	77.418	ENSPPAG00000024593	PDCD11	100	78.177	Pan_paniscus
MGP_CAROLIEiJ_G0023050	Pdcd11	99	78.279	ENSPPRG00000015133	PDCD11	99	78.386	Panthera_pardus
MGP_CAROLIEiJ_G0023050	Pdcd11	99	78.226	ENSPTIG00000011433	PDCD11	99	78.332	Panthera_tigris_altaica
MGP_CAROLIEiJ_G0023050	Pdcd11	100	80.106	ENSPTRG00000002911	PDCD11	100	80.053	Pan_troglodytes
MGP_CAROLIEiJ_G0023050	Pdcd11	100	80.426	ENSPANG00000020959	PDCD11	100	80.372	Papio_anubis
MGP_CAROLIEiJ_G0023050	Pdcd11	99	45.896	ENSPKIG00000000973	pdcd11	99	45.494	Paramormyrops_kingsleyae
MGP_CAROLIEiJ_G0023050	Pdcd11	79	55.525	ENSPSIG00000005102	PDCD11	95	55.433	Pelodiscus_sinensis
MGP_CAROLIEiJ_G0023050	Pdcd11	68	48.211	ENSPMGG00000007289	pdcd11	90	47.468	Periophthalmus_magnuspinnatus
MGP_CAROLIEiJ_G0023050	Pdcd11	100	84.317	ENSPEMG00000010315	Pdcd11	100	84.955	Peromyscus_maniculatus_bairdii
MGP_CAROLIEiJ_G0023050	Pdcd11	99	42.139	ENSPMAG00000003098	pdcd11	99	41.930	Petromyzon_marinus
MGP_CAROLIEiJ_G0023050	Pdcd11	100	64.836	ENSPCIG00000001118	PDCD11	100	64.361	Phascolarctos_cinereus
MGP_CAROLIEiJ_G0023050	Pdcd11	99	43.233	ENSPFOG00000006012	pdcd11	99	43.469	Poecilia_formosa
MGP_CAROLIEiJ_G0023050	Pdcd11	96	47.970	ENSPLAG00000014494	pdcd11	99	48.030	Poecilia_latipinna
MGP_CAROLIEiJ_G0023050	Pdcd11	92	52.459	ENSPMEG00000018177	pdcd11	99	53.503	Poecilia_mexicana
MGP_CAROLIEiJ_G0023050	Pdcd11	99	43.185	ENSPREG00000000475	pdcd11	99	43.420	Poecilia_reticulata
MGP_CAROLIEiJ_G0023050	Pdcd11	100	78.286	ENSPPYG00000002621	PDCD11	100	78.214	Pongo_abelii
MGP_CAROLIEiJ_G0023050	Pdcd11	73	70.815	ENSPCAG00000011663	PDCD11	75	70.815	Procavia_capensis
MGP_CAROLIEiJ_G0023050	Pdcd11	92	76.852	ENSPCOG00000023327	PDCD11	99	76.720	Propithecus_coquereli
MGP_CAROLIEiJ_G0023050	Pdcd11	100	77.082	ENSPVAG00000004176	PDCD11	100	76.805	Pteropus_vampyrus
MGP_CAROLIEiJ_G0023050	Pdcd11	99	43.730	ENSPNYG00000003979	pdcd11	99	44.212	Pundamilia_nyererei
MGP_CAROLIEiJ_G0023050	Pdcd11	95	44.785	ENSPNAG00000017225	pdcd11	99	44.768	Pygocentrus_nattereri
MGP_CAROLIEiJ_G0023050	Pdcd11	100	89.675	ENSRNOG00000020304	Pdcd11	99	89.729	Rattus_norvegicus
MGP_CAROLIEiJ_G0023050	Pdcd11	100	79.799	ENSRBIG00000011889	PDCD11	100	80.213	Rhinopithecus_bieti
MGP_CAROLIEiJ_G0023050	Pdcd11	100	79.852	ENSRROG00000030483	PDCD11	100	80.266	Rhinopithecus_roxellana
MGP_CAROLIEiJ_G0023050	Pdcd11	87	47.253	YMR229C	-	95	42.197	Saccharomyces_cerevisiae
MGP_CAROLIEiJ_G0023050	Pdcd11	99	80.266	ENSSBOG00000030308	PDCD11	99	80.266	Saimiri_boliviensis_boliviensis
MGP_CAROLIEiJ_G0023050	Pdcd11	99	63.400	ENSSHAG00000018258	PDCD11	99	63.169	Sarcophilus_harrisii
MGP_CAROLIEiJ_G0023050	Pdcd11	99	46.233	ENSSFOG00015003881	pdcd11	99	45.845	Scleropages_formosus
MGP_CAROLIEiJ_G0023050	Pdcd11	99	43.944	ENSSMAG00000006612	pdcd11	99	43.833	Scophthalmus_maximus
MGP_CAROLIEiJ_G0023050	Pdcd11	95	48.899	ENSSDUG00000021302	pdcd11	99	48.758	Seriola_dumerili
MGP_CAROLIEiJ_G0023050	Pdcd11	80	89.286	ENSSARG00000002540	PDCD11	74	89.286	Sorex_araneus
MGP_CAROLIEiJ_G0023050	Pdcd11	97	42.653	ENSSPAG00000017558	pdcd11	100	42.581	Stegastes_partitus
MGP_CAROLIEiJ_G0023050	Pdcd11	100	77.041	ENSSSCG00000010599	PDCD11	100	77.205	Sus_scrofa
MGP_CAROLIEiJ_G0023050	Pdcd11	78	40.696	ENSTRUG00000014291	pdcd11	99	40.802	Takifugu_rubripes
MGP_CAROLIEiJ_G0023050	Pdcd11	99	43.388	ENSTNIG00000012085	pdcd11	99	43.305	Tetraodon_nigroviridis
MGP_CAROLIEiJ_G0023050	Pdcd11	100	74.045	ENSTBEG00000001893	PDCD11	96	90.028	Tupaia_belangeri
MGP_CAROLIEiJ_G0023050	Pdcd11	99	72.655	ENSTTRG00000003356	PDCD11	99	72.761	Tursiops_truncatus
MGP_CAROLIEiJ_G0023050	Pdcd11	99	78.473	ENSUAMG00000018015	PDCD11	100	78.420	Ursus_americanus
MGP_CAROLIEiJ_G0023050	Pdcd11	100	76.996	ENSUMAG00000023567	PDCD11	100	76.891	Ursus_maritimus
MGP_CAROLIEiJ_G0023050	Pdcd11	68	78.358	ENSVPAG00000007405	PDCD11	83	78.358	Vicugna_pacos
MGP_CAROLIEiJ_G0023050	Pdcd11	99	77.961	ENSVVUG00000004457	PDCD11	100	77.937	Vulpes_vulpes
MGP_CAROLIEiJ_G0023050	Pdcd11	99	48.970	ENSXETG00000009482	pdcd11	99	48.997	Xenopus_tropicalis
MGP_CAROLIEiJ_G0023050	Pdcd11	99	37.687	ENSXCOG00000012420	pdcd11	99	37.708	Xiphophorus_couchianus
MGP_CAROLIEiJ_G0023050	Pdcd11	99	43.278	ENSXMAG00000004638	pdcd11	99	43.476	Xiphophorus_maculatus