EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_CAROLIEiJ_G0023057 (Gene tree)
Gene ID: 110285611
Gene Symbol: Stn1
Alias: 0610009H20Rik|2310057J23Rik|Obfc1
Full Name: STN1%2C CST complex subunit
Gene Type: protein_coding
Species: Mus_caroli
Status: putative
Strand: Minus strand
Length: 37267 bases
Position: chr19:44179933-44217199
Accession: 110285611
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CAROLIEiJ_P0049078	tRNA_anti-codon	PF01336.25	1.3e-07	1	1
MGP_CAROLIEiJ_P0049076	tRNA_anti-codon	PF01336.25	1.4e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CAROLIEiJ_T0049078	-	1585	-	MGP_CAROLIEiJ_P0049078	360 (aa)	-	-
MGP_CAROLIEiJ_T0049080	-	535	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0049076	-	1998	XM_021151891	MGP_CAROLIEiJ_P0049076	378 (aa)	XP_021007550	UPI000A31A3F8
MGP_CAROLIEiJ_T0049077	-	808	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0049085	-	132	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0049084	-	684	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0049081	-	1073	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0049079	-	557	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0049083	-	444	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0049082	-	748	-	MGP_CAROLIEiJ_P0049082	99 (aa)	-	-

Gene Model

Click here to download MGP_CAROLIEiJ_G0023057's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CAROLIEiJ_G0023057's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_CAROLIEiJ_G0023057	Stn1	98	71.968	ENSG00000107960	STN1	100	71.968	Homo_sapiens
MGP_CAROLIEiJ_G0023057	Stn1	99	65.252	ENSAMEG00000017971	STN1	99	65.252	Ailuropoda_melanoleuca
MGP_CAROLIEiJ_G0023057	Stn1	98	54.839	ENSAPLG00000006661	STN1	100	54.839	Anas_platyrhynchos
MGP_CAROLIEiJ_G0023057	Stn1	98	45.968	ENSACAG00000004954	STN1	100	45.968	Anolis_carolinensis
MGP_CAROLIEiJ_G0023057	Stn1	98	70.081	ENSANAG00000038147	STN1	100	70.081	Aotus_nancymaae
MGP_CAROLIEiJ_G0023057	Stn1	99	68.435	ENSBTAG00000015019	STN1	100	68.464	Bos_taurus
MGP_CAROLIEiJ_G0023057	Stn1	98	70.889	ENSCJAG00000040388	STN1	100	70.889	Callithrix_jacchus
MGP_CAROLIEiJ_G0023057	Stn1	98	67.112	ENSCAFG00000010483	STN1	100	67.112	Canis_familiaris
MGP_CAROLIEiJ_G0023057	Stn1	98	66.935	ENSCAFG00020010650	STN1	100	66.935	Canis_lupus_dingo
MGP_CAROLIEiJ_G0023057	Stn1	98	67.925	ENSCHIG00000019425	-	100	68.464	Capra_hircus
MGP_CAROLIEiJ_G0023057	Stn1	99	60.477	ENSCHIG00000003253	-	100	61.008	Capra_hircus
MGP_CAROLIEiJ_G0023057	Stn1	86	67.385	ENSCAPG00000016278	STN1	99	67.385	Cavia_aperea
MGP_CAROLIEiJ_G0023057	Stn1	100	67.725	ENSCPOG00000006273	STN1	100	67.725	Cavia_porcellus
MGP_CAROLIEiJ_G0023057	Stn1	98	70.889	ENSCCAG00000020507	STN1	100	70.889	Cebus_capucinus
MGP_CAROLIEiJ_G0023057	Stn1	98	70.620	ENSCATG00000043103	STN1	100	70.620	Cercocebus_atys
MGP_CAROLIEiJ_G0023057	Stn1	100	67.196	ENSCLAG00000001617	STN1	100	67.196	Chinchilla_lanigera
MGP_CAROLIEiJ_G0023057	Stn1	98	71.159	ENSCSAG00000005318	STN1	100	71.159	Chlorocebus_sabaeus
MGP_CAROLIEiJ_G0023057	Stn1	98	54.032	ENSCPBG00000024481	STN1	100	54.032	Chrysemys_picta_bellii
MGP_CAROLIEiJ_G0023057	Stn1	98	71.159	ENSCANG00000029004	STN1	100	71.159	Colobus_angolensis_palliatus
MGP_CAROLIEiJ_G0023057	Stn1	100	71.164	ENSCGRG00001023175	Stn1	100	71.164	Cricetulus_griseus_chok1gshd
MGP_CAROLIEiJ_G0023057	Stn1	100	81.481	ENSCGRG00000004324	Stn1	100	81.481	Cricetulus_griseus_crigri
MGP_CAROLIEiJ_G0023057	Stn1	95	42.507	ENSDARG00000007734	stn1	96	42.507	Danio_rerio
MGP_CAROLIEiJ_G0023057	Stn1	89	65.938	ENSDNOG00000011022	STN1	99	65.938	Dasypus_novemcinctus
MGP_CAROLIEiJ_G0023057	Stn1	94	69.748	ENSDORG00000005994	Stn1	100	69.542	Dipodomys_ordii
MGP_CAROLIEiJ_G0023057	Stn1	97	61.247	ENSETEG00000013967	STN1	99	61.247	Echinops_telfairi
MGP_CAROLIEiJ_G0023057	Stn1	98	69.624	ENSEASG00005015134	STN1	100	69.624	Equus_asinus_asinus
MGP_CAROLIEiJ_G0023057	Stn1	98	68.817	ENSECAG00000023477	STN1	100	69.355	Equus_caballus
MGP_CAROLIEiJ_G0023057	Stn1	94	68.347	ENSFCAG00000030378	STN1	100	68.194	Felis_catus
MGP_CAROLIEiJ_G0023057	Stn1	98	54.155	ENSFALG00000008791	STN1	100	54.155	Ficedula_albicollis
MGP_CAROLIEiJ_G0023057	Stn1	100	64.550	ENSFDAG00000007528	STN1	100	64.550	Fukomys_damarensis
MGP_CAROLIEiJ_G0023057	Stn1	98	54.155	ENSGALG00000008304	STN1	100	54.155	Gallus_gallus
MGP_CAROLIEiJ_G0023057	Stn1	92	49.107	ENSGAGG00000003673	STN1	99	49.107	Gopherus_agassizii
MGP_CAROLIEiJ_G0023057	Stn1	98	71.698	ENSGGOG00000008979	STN1	100	71.698	Gorilla_gorilla
MGP_CAROLIEiJ_G0023057	Stn1	100	67.196	ENSHGLG00000002775	OBFC1	100	67.196	Heterocephalus_glaber_female
MGP_CAROLIEiJ_G0023057	Stn1	100	66.931	ENSHGLG00100012701	STN1	100	66.931	Heterocephalus_glaber_male
MGP_CAROLIEiJ_G0023057	Stn1	96	41.033	ENSHCOG00000002048	stn1	98	41.033	Hippocampus_comes
MGP_CAROLIEiJ_G0023057	Stn1	100	68.254	ENSSTOG00000011905	STN1	100	68.254	Ictidomys_tridecemlineatus
MGP_CAROLIEiJ_G0023057	Stn1	100	66.755	ENSJJAG00000020389	Stn1	100	66.755	Jaculus_jaculus
MGP_CAROLIEiJ_G0023057	Stn1	97	45.213	ENSLACG00000012381	STN1	99	45.213	Latimeria_chalumnae
MGP_CAROLIEiJ_G0023057	Stn1	95	67.956	ENSLAFG00000004232	STN1	99	67.192	Loxodonta_africana
MGP_CAROLIEiJ_G0023057	Stn1	98	70.620	ENSMFAG00000041817	STN1	100	70.620	Macaca_fascicularis
MGP_CAROLIEiJ_G0023057	Stn1	98	70.620	ENSMMUG00000015323	STN1	100	70.620	Macaca_mulatta
MGP_CAROLIEiJ_G0023057	Stn1	98	69.811	ENSMNEG00000031906	STN1	100	69.811	Macaca_nemestrina
MGP_CAROLIEiJ_G0023057	Stn1	98	70.889	ENSMLEG00000040619	STN1	100	70.889	Mandrillus_leucophaeus
MGP_CAROLIEiJ_G0023057	Stn1	99	55.291	ENSMGAG00000010550	STN1	99	55.291	Meleagris_gallopavo
MGP_CAROLIEiJ_G0023057	Stn1	99	82.979	ENSMAUG00000015671	Stn1	99	82.979	Mesocricetus_auratus
MGP_CAROLIEiJ_G0023057	Stn1	98	67.116	ENSMICG00000012547	STN1	100	67.925	Microcebus_murinus
MGP_CAROLIEiJ_G0023057	Stn1	100	73.515	ENSMOCG00000009637	Stn1	100	73.515	Microtus_ochrogaster
MGP_CAROLIEiJ_G0023057	Stn1	98	58.760	ENSMODG00000011003	STN1	100	58.760	Monodelphis_domestica
MGP_CAROLIEiJ_G0023057	Stn1	100	96.561	ENSMUSG00000042694	Stn1	100	96.561	Mus_musculus
MGP_CAROLIEiJ_G0023057	Stn1	100	94.974	MGP_PahariEiJ_G0014547	Stn1	100	94.974	Mus_pahari
MGP_CAROLIEiJ_G0023057	Stn1	100	96.032	MGP_SPRETEiJ_G0023978	Stn1	100	96.032	Mus_spretus
MGP_CAROLIEiJ_G0023057	Stn1	98	62.567	ENSMPUG00000016800	STN1	100	62.567	Mustela_putorius_furo
MGP_CAROLIEiJ_G0023057	Stn1	99	68.407	ENSMLUG00000002037	STN1	99	68.407	Myotis_lucifugus
MGP_CAROLIEiJ_G0023057	Stn1	100	74.074	ENSNGAG00000023986	Stn1	100	74.074	Nannospalax_galili
MGP_CAROLIEiJ_G0023057	Stn1	98	71.968	ENSNLEG00000015282	STN1	100	71.968	Nomascus_leucogenys
MGP_CAROLIEiJ_G0023057	Stn1	98	67.385	ENSOPRG00000010707	STN1	100	67.385	Ochotona_princeps
MGP_CAROLIEiJ_G0023057	Stn1	100	61.376	ENSODEG00000007270	STN1	100	61.376	Octodon_degus
MGP_CAROLIEiJ_G0023057	Stn1	96	56.630	ENSOANG00000001628	STN1	98	56.630	Ornithorhynchus_anatinus
MGP_CAROLIEiJ_G0023057	Stn1	100	72.222	ENSOCUG00000003028	STN1	100	72.222	Oryctolagus_cuniculus
MGP_CAROLIEiJ_G0023057	Stn1	96	41.600	ENSORLG00000002353	stn1	99	41.600	Oryzias_latipes
MGP_CAROLIEiJ_G0023057	Stn1	96	42.359	ENSORLG00020012935	stn1	98	42.359	Oryzias_latipes_hni
MGP_CAROLIEiJ_G0023057	Stn1	96	41.823	ENSORLG00015012154	stn1	98	41.823	Oryzias_latipes_hsok
MGP_CAROLIEiJ_G0023057	Stn1	99	66.755	ENSOGAG00000008722	STN1	99	66.755	Otolemur_garnettii
MGP_CAROLIEiJ_G0023057	Stn1	99	67.368	ENSOARG00000004883	STN1	99	67.368	Ovis_aries
MGP_CAROLIEiJ_G0023057	Stn1	98	71.698	ENSPPAG00000030947	STN1	100	71.698	Pan_paniscus
MGP_CAROLIEiJ_G0023057	Stn1	94	68.627	ENSPPRG00000010476	STN1	100	68.464	Panthera_pardus
MGP_CAROLIEiJ_G0023057	Stn1	94	67.313	ENSPTIG00000017333	STN1	100	67.200	Panthera_tigris_altaica
MGP_CAROLIEiJ_G0023057	Stn1	98	71.698	ENSPTRG00000002919	STN1	100	71.698	Pan_troglodytes
MGP_CAROLIEiJ_G0023057	Stn1	98	70.620	ENSPANG00000020926	STN1	100	70.620	Papio_anubis
MGP_CAROLIEiJ_G0023057	Stn1	95	40.872	ENSPKIG00000000721	stn1	97	40.872	Paramormyrops_kingsleyae
MGP_CAROLIEiJ_G0023057	Stn1	98	52.151	ENSPSIG00000010802	STN1	100	52.151	Pelodiscus_sinensis
MGP_CAROLIEiJ_G0023057	Stn1	100	79.420	ENSPEMG00000013944	Stn1	100	79.420	Peromyscus_maniculatus_bairdii
MGP_CAROLIEiJ_G0023057	Stn1	97	60.109	ENSPCIG00000024497	STN1	99	60.109	Phascolarctos_cinereus
MGP_CAROLIEiJ_G0023057	Stn1	98	71.698	ENSPPYG00000002628	STN1	100	71.698	Pongo_abelii
MGP_CAROLIEiJ_G0023057	Stn1	98	69.811	ENSPCOG00000017648	STN1	100	69.811	Propithecus_coquereli
MGP_CAROLIEiJ_G0023057	Stn1	98	65.229	ENSPVAG00000004187	STN1	100	65.229	Pteropus_vampyrus
MGP_CAROLIEiJ_G0023057	Stn1	100	88.360	ENSRNOG00000020376	Stn1	100	88.360	Rattus_norvegicus
MGP_CAROLIEiJ_G0023057	Stn1	98	71.159	ENSRBIG00000039819	STN1	100	71.159	Rhinopithecus_bieti
MGP_CAROLIEiJ_G0023057	Stn1	98	71.159	ENSRROG00000013903	STN1	100	71.159	Rhinopithecus_roxellana
MGP_CAROLIEiJ_G0023057	Stn1	98	71.698	ENSSBOG00000031516	STN1	100	71.698	Saimiri_boliviensis_boliviensis
MGP_CAROLIEiJ_G0023057	Stn1	97	59.730	ENSSHAG00000017550	STN1	99	59.730	Sarcophilus_harrisii
MGP_CAROLIEiJ_G0023057	Stn1	96	41.935	ENSSFOG00015004107	stn1	98	41.935	Scleropages_formosus
MGP_CAROLIEiJ_G0023057	Stn1	99	67.467	ENSSSCG00000010605	STN1	86	67.467	Sus_scrofa
MGP_CAROLIEiJ_G0023057	Stn1	98	53.083	ENSTGUG00000010354	STN1	100	53.083	Taeniopygia_guttata
MGP_CAROLIEiJ_G0023057	Stn1	98	44.474	ENSTNIG00000014162	stn1	98	44.474	Tetraodon_nigroviridis
MGP_CAROLIEiJ_G0023057	Stn1	65	70.408	ENSTBEG00000000659	STN1	66	70.408	Tupaia_belangeri
MGP_CAROLIEiJ_G0023057	Stn1	98	67.655	ENSTTRG00000003375	STN1	100	67.655	Tursiops_truncatus
MGP_CAROLIEiJ_G0023057	Stn1	98	62.534	ENSUMAG00000023647	STN1	100	62.534	Ursus_maritimus
MGP_CAROLIEiJ_G0023057	Stn1	98	69.542	ENSVPAG00000002530	STN1	100	69.542	Vicugna_pacos
MGP_CAROLIEiJ_G0023057	Stn1	99	66.402	ENSVVUG00000004636	-	61	66.402	Vulpes_vulpes
MGP_CAROLIEiJ_G0023057	Stn1	94	46.961	ENSXETG00000011402	STN1	99	46.092	Xenopus_tropicalis